RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 BCL2L13Q9BXK5 485 aa14.63□□□□□ -0.07
SLIRP-205ENST00000556310 SRCIN1Q9C0H9 1055 aa14.63□□□□□ -0.07
SLIRP-205ENST00000556310 RRAGCQ9HB90 399 aa14.63□□□□□ -0.07
SLIRP-205ENST00000556310 GRM8O00222 908 aa14.62□□□□□ -0.07
SLIRP-205ENST00000556310 TOMM70O94826 608 aa14.62□□□□□ -0.07
SLIRP-205ENST00000556310 PRKAR2AP13861 404 aaKnown RBP14.62□□□□□ -0.07
SLIRP-205ENST00000556310 VEGFAP15692 232 aaPredicted RBP14.62□□□□□ -0.07
SLIRP-205ENST00000556310 C16orf71Q8IYS4 520 aaPredicted RBP14.62□□□□□ -0.07
SLIRP-205ENST00000556310 CDC5LQ99459 802 aaKnown RBP14.62□□□□□ -0.07
SLIRP-205ENST00000556310 A0A1B0GUL6 1792 aa14.62□□□□□ -0.07
SLIRP-205ENST00000556310 DDNO94850 711 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-205ENST00000556310 FXR2P51116 673 aaKnown RBP eCLIP14.61□□□□□ -0.07
SLIRP-205ENST00000556310 KIAA2012Q0VF49 1180 aa14.61□□□□□ -0.07
SLIRP-205ENST00000556310 AOC3Q16853 763 aa14.61□□□□□ -0.07
SLIRP-205ENST00000556310 ANKRD18AQ8IVF6 992 aa14.61□□□□□ -0.07
SLIRP-205ENST00000556310 NIM1KQ8IY84 436 aa14.61□□□□□ -0.07
SLIRP-205ENST00000556310 L3MBTL3Q96JM7 780 aaPredicted RBP14.61□□□□□ -0.07
SLIRP-205ENST00000556310 GREM2Q9H772 168 aa14.61□□□□□ -0.07
SLIRP-205ENST00000556310 BRPF1P55201 1214 aaPredicted RBP14.6□□□□□ -0.07
SLIRP-205ENST00000556310 EIF6P56537 245 aaKnown RBP14.6□□□□□ -0.07
SLIRP-205ENST00000556310 FAM161AQ3B820 660 aa14.6□□□□□ -0.07
SLIRP-205ENST00000556310 RBM46Q8TBY0 533 aaKnown RBP14.6□□□□□ -0.07
SLIRP-205ENST00000556310 NSFL1CQ9UNZ2 370 aaKnown RBP14.6□□□□□ -0.07
SLIRP-205ENST00000556310 ZBED9Q6R2W3 1325 aa14.6□□□□□ -0.07
SLIRP-205ENST00000556310 POTECB2RU33 542 aa14.59□□□□□ -0.07
SLIRP-205ENST00000556310 CSF1RP07333 972 aa14.59□□□□□ -0.07
SLIRP-205ENST00000556310 NUBP1P53384 320 aa14.59□□□□□ -0.07
SLIRP-205ENST00000556310 GPSM2P81274 684 aa14.59□□□□□ -0.07
SLIRP-205ENST00000556310 GPC2Q8N158 579 aa14.59□□□□□ -0.07
SLIRP-205ENST00000556310 PODXL2Q9NZ53 605 aa14.59□□□□□ -0.07
SLIRP-205ENST00000556310 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
SLIRP-205ENST00000556310 PSME4Q14997 1843 aa14.58□□□□□ -0.08
SLIRP-205ENST00000556310 IQCA1LA6NCM1 817 aa14.58□□□□□ -0.08
SLIRP-205ENST00000556310 ITGA6P23229 1130 aa14.58□□□□□ -0.08
SLIRP-205ENST00000556310 RARSP54136 660 aaKnown RBP14.58□□□□□ -0.08
SLIRP-205ENST00000556310 EYA3Q99504 573 aa14.58□□□□□ -0.08
SLIRP-205ENST00000556310 POLLQ9UGP5 575 aa14.58□□□□□ -0.08
SLIRP-205ENST00000556310 UTYO14607 1347 aa14.58□□□□□ -0.08
SLIRP-205ENST00000556310 XDHP47989 1333 aa14.58□□□□□ -0.08
SLIRP-205ENST00000556310 KIF16BQ96L93 1317 aa14.58□□□□□ -0.08
SLIRP-205ENST00000556310 ADAMTSL1Q8N6G6 1762 aa14.57□□□□□ -0.08
SLIRP-205ENST00000556310 C6orf229H3BNL8 230 aa14.57□□□□□ -0.08
SLIRP-205ENST00000556310 ECM2O94769 699 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-205ENST00000556310 IGHMBP2P38935 993 aaKnown RBP14.57□□□□□ -0.08
SLIRP-205ENST00000556310 FOXO4P98177 505 aa14.57□□□□□ -0.08
SLIRP-205ENST00000556310 TBC1D16Q8TBP0 767 aa14.57□□□□□ -0.08
SLIRP-205ENST00000556310 BSDC1Q9NW68 430 aaPredicted RBP14.57□□□□□ -0.08
SLIRP-205ENST00000556310 ANKIB1Q9P2G1 1089 aa14.57□□□□□ -0.08
SLIRP-205ENST00000556310 GGA1Q9UJY5 639 aa14.57□□□□□ -0.08
SLIRP-205ENST00000556310 ZNRF3Q9ULT6 936 aa14.57□□□□□ -0.08
SLIRP-205ENST00000556310 UFL1O94874 794 aa14.56□□□□□ -0.08
SLIRP-205ENST00000556310 FSTL1Q12841 308 aa14.56□□□□□ -0.08
SLIRP-205ENST00000556310 WASHC4Q2M389 1173 aa14.56□□□□□ -0.08
SLIRP-205ENST00000556310 PIP4P2Q8N4L2 257 aa14.56□□□□□ -0.08
SLIRP-205ENST00000556310 SCN9AQ15858 1988 aa14.55□□□□□ -0.08
SLIRP-205ENST00000556310 ANKRD18BA2A2Z9 1011 aa14.55□□□□□ -0.08
SLIRP-205ENST00000556310 EPHA10Q5JZY3 1008 aa14.55□□□□□ -0.08
SLIRP-205ENST00000556310 LMBR1LQ6UX01 489 aa14.55□□□□□ -0.08
SLIRP-205ENST00000556310 SMC1BQ8NDV3 1235 aa14.55□□□□□ -0.08
SLIRP-205ENST00000556310 SUCLG2Q96I99 432 aa14.55□□□□□ -0.08
SLIRP-205ENST00000556310 API5Q9BZZ5 524 aaKnown RBP14.55□□□□□ -0.08
SLIRP-205ENST00000556310 HACL1Q9UJ83 578 aa14.55□□□□□ -0.08
SLIRP-205ENST00000556310 NOB1Q9ULX3 412 aaKnown RBP14.55□□□□□ -0.08
SLIRP-205ENST00000556310 MINPP1Q9UNW1 487 aa14.55□□□□□ -0.08
SLIRP-205ENST00000556310 FARP1Q9Y4F1 1045 aaPredicted RBP14.55□□□□□ -0.08
SLIRP-205ENST00000556310 GJA3Q9Y6H8 435 aa14.55□□□□□ -0.08
SLIRP-205ENST00000556310 NBPF7P0C2Y1 421 aaPredicted RBP14.54□□□□□ -0.08
SLIRP-205ENST00000556310 HSPA6P17066 643 aa14.54□□□□□ -0.08
SLIRP-205ENST00000556310 ATP2B4P23634 1241 aa14.54□□□□□ -0.08
SLIRP-205ENST00000556310 CCT4P50991 539 aaKnown RBP14.54□□□□□ -0.08
SLIRP-205ENST00000556310 CXCL9Q07325 125 aa14.54□□□□□ -0.08
SLIRP-205ENST00000556310 IFIT5Q13325 482 aaKnown RBP14.54□□□□□ -0.08
SLIRP-205ENST00000556310 DCAF8Q5TAQ9 597 aa14.54□□□□□ -0.08
SLIRP-205ENST00000556310 GPR101Q96P66 508 aaPredicted RBP14.54□□□□□ -0.08
SLIRP-205ENST00000556310 MPHOSPH8Q99549 860 aa14.54□□□□□ -0.08
SLIRP-205ENST00000556310 TAF1DQ9H5J8 278 aaPredicted RBP14.54□□□□□ -0.08
SLIRP-205ENST00000556310 CHMP3Q9Y3E7 222 aa14.54□□□□□ -0.08
SLIRP-205ENST00000556310 CEP350Q5VT06 3117 aa14.54□□□□□ -0.08
SLIRP-205ENST00000556310 MED23Q9ULK4 1368 aa14.53□□□□□ -0.08
SLIRP-205ENST00000556310 YDJCA8MPS7 323 aa14.53□□□□□ -0.08
SLIRP-205ENST00000556310 RIMBP2O15034 1052 aa14.53□□□□□ -0.08
SLIRP-205ENST00000556310 LMOD1P29536 600 aaPredicted RBP14.53□□□□□ -0.08
SLIRP-205ENST00000556310 CIAPIN1Q6FI81 312 aa14.53□□□□□ -0.08
SLIRP-205ENST00000556310 ARHGAP45Q92619 1136 aa14.53□□□□□ -0.08
SLIRP-205ENST00000556310 KAZALD1Q96I82 304 aa14.53□□□□□ -0.08
SLIRP-205ENST00000556310 ZC3H12CQ9C0D7 883 aaKnown RBP14.53□□□□□ -0.08
SLIRP-205ENST00000556310 DBNDD1Q9H9R9 158 aa14.53□□□□□ -0.08
SLIRP-205ENST00000556310 ZNF646O15015 1829 aaPredicted RBP14.52□□□□□ -0.08
SLIRP-205ENST00000556310 ECE2O60344 883 aa14.52□□□□□ -0.09
SLIRP-205ENST00000556310 EPHX2P34913 555 aa14.52□□□□□ -0.09
SLIRP-205ENST00000556310 SCNN1DP51172 638 aa14.52□□□□□ -0.09
SLIRP-205ENST00000556310 GSE1Q14687 1217 aa14.52□□□□□ -0.09
SLIRP-205ENST00000556310 TNIP1Q15025 636 aa14.52□□□□□ -0.09
SLIRP-205ENST00000556310 CCDC57Q2TAC2 916 aa14.52□□□□□ -0.09
SLIRP-205ENST00000556310 RABL6Q3YEC7 729 aaPredicted RBP14.52□□□□□ -0.09
SLIRP-205ENST00000556310 ANKRD2Q9GZV1 360 aa14.52□□□□□ -0.09
SLIRP-205ENST00000556310 USP44Q9H0E7 712 aa14.52□□□□□ -0.09
SLIRP-205ENST00000556310 RAD17O75943 681 aa14.51□□□□□ -0.09
SLIRP-205ENST00000556310 LDHDQ86WU2 507 aa14.51□□□□□ -0.09
SLIRP-205ENST00000556310 FAM212AQ96EL1 285 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms