RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 DBNDD1Q9H9R9 158 aa22.84■■□□□ 1.25
NPC2-208ENST00000556009 SEC31BQ9NQW1 1179 aa22.84■■□□□ 1.25
NPC2-208ENST00000556009 ZBTB12Q9Y330 459 aaPredicted RBP22.84■■□□□ 1.25
NPC2-208ENST00000556009 CELF2O95319 508 aaKnown RBP22.83■■□□□ 1.25
NPC2-208ENST00000556009 HSPA8P11142 646 aaKnown RBP22.83■■□□□ 1.25
NPC2-208ENST00000556009 MAP2K2P36507 400 aa22.83■■□□□ 1.25
NPC2-208ENST00000556009 CCDC27Q2M243 656 aa22.83■■□□□ 1.25
NPC2-208ENST00000556009 CCDC152Q4G0S7 254 aa22.83■■□□□ 1.25
NPC2-208ENST00000556009 CYP4F22Q6NT55 531 aa22.83■■□□□ 1.25
NPC2-208ENST00000556009 ZC3H12CQ9C0D7 883 aaKnown RBP22.83■■□□□ 1.25
NPC2-208ENST00000556009 ECE2O60344 883 aa22.82■■□□□ 1.24
NPC2-208ENST00000556009 TSPYL6Q8N831 410 aa22.82■■□□□ 1.24
NPC2-208ENST00000556009 NCBP3Q53F19 620 aaKnown RBP22.81■■□□□ 1.24
NPC2-208ENST00000556009 KSR2Q6VAB6 950 aa22.81■■□□□ 1.24
NPC2-208ENST00000556009 PAXIP1Q6ZW49 1069 aaPredicted RBP22.81■■□□□ 1.24
NPC2-208ENST00000556009 VIL1P09327 827 aaKnown RBP22.8■■□□□ 1.24
NPC2-208ENST00000556009 GRM1Q13255 1194 aa22.8■■□□□ 1.24
NPC2-208ENST00000556009 DOK7Q18PE1 504 aa22.8■■□□□ 1.24
NPC2-208ENST00000556009 KCNQ5Q9NR82 932 aa22.8■■□□□ 1.24
NPC2-208ENST00000556009 MAP3K2Q9Y2U5 619 aa22.8■■□□□ 1.24
NPC2-208ENST00000556009 RTL9Q8NET4 1388 aa22.79■■□□□ 1.24
NPC2-208ENST00000556009 SAMD7Q7Z3H4 446 aa22.79■■□□□ 1.24
NPC2-208ENST00000556009 ANKIB1Q9P2G1 1089 aa22.79■■□□□ 1.24
NPC2-208ENST00000556009 GGA1Q9UJY5 639 aa22.79■■□□□ 1.24
NPC2-208ENST00000556009 PI4KAP2A4QPH2 592 aa22.78■■□□□ 1.24
NPC2-208ENST00000556009 CCDC184Q52MB2 194 aa22.78■■□□□ 1.24
NPC2-208ENST00000556009 USP48Q86UV5 1035 aa22.78■■□□□ 1.24
NPC2-208ENST00000556009 WWC1Q8IX03 1113 aa22.78■■□□□ 1.24
NPC2-208ENST00000556009 PI4KAP1Q8N8J0 262 aa22.78■■□□□ 1.24
NPC2-208ENST00000556009 BEGAINQ9BUH8 593 aa22.78■■□□□ 1.24
NPC2-208ENST00000556009 ZNF646O15015 1829 aaPredicted RBP22.78■■□□□ 1.24
NPC2-208ENST00000556009 AOC2O75106 756 aa22.77■■□□□ 1.24
NPC2-208ENST00000556009 UFL1O94874 794 aa22.77■■□□□ 1.24
NPC2-208ENST00000556009 IGKV5-2P06315 115 aa22.77■■□□□ 1.24
NPC2-208ENST00000556009 TBC1D10BQ4KMP7 808 aaPredicted RBP22.77■■□□□ 1.24
NPC2-208ENST00000556009 ANKRD18AQ8IVF6 992 aa22.77■■□□□ 1.24
NPC2-208ENST00000556009 JARID2Q92833 1246 aaPredicted RBP22.77■■□□□ 1.24
NPC2-208ENST00000556009 TSR2Q969E8 191 aaKnown RBP22.77■■□□□ 1.24
NPC2-208ENST00000556009 STK31Q9BXU1 1019 aa22.77■■□□□ 1.24
NPC2-208ENST00000556009 EGFRP00533 1210 aa22.76■■□□□ 1.23
NPC2-208ENST00000556009 DLK2Q6UY11 383 aa22.76■■□□□ 1.23
NPC2-208ENST00000556009 IL16Q14005 1332 aa22.76■■□□□ 1.23
NPC2-208ENST00000556009 CASP8AP2Q9UKL3 1982 aa22.76■■□□□ 1.23
NPC2-208ENST00000556009 NEXNQ0ZGT2 675 aa22.75■■□□□ 1.23
NPC2-208ENST00000556009 ZNF408Q9H9D4 720 aa22.75■■□□□ 1.23
NPC2-208ENST00000556009 XDHP47989 1333 aa22.75■■□□□ 1.23
NPC2-208ENST00000556009 G3V3G9 751 aa22.74■■□□□ 1.23
NPC2-208ENST00000556009 ATP2B4P23634 1241 aa22.74■■□□□ 1.23
NPC2-208ENST00000556009 TWISTNBQ3B726 338 aaPredicted RBP22.74■■□□□ 1.23
NPC2-208ENST00000556009 DCAF8Q5TAQ9 597 aa22.74■■□□□ 1.23
NPC2-208ENST00000556009 KRT26Q7Z3Y9 468 aa22.74■■□□□ 1.23
NPC2-208ENST00000556009 TTLL11Q8NHH1 800 aa22.74■■□□□ 1.23
NPC2-208ENST00000556009 CCDC85AQ96PX6 553 aaPredicted RBP22.74■■□□□ 1.23
NPC2-208ENST00000556009 CDC5LQ99459 802 aaKnown RBP22.74■■□□□ 1.23
NPC2-208ENST00000556009 ZNF609O15014 1411 aa22.74■■□□□ 1.23
NPC2-208ENST00000556009 CA12O43570 354 aa22.73■■□□□ 1.23
NPC2-208ENST00000556009 CTSWP56202 376 aa22.73■■□□□ 1.23
NPC2-208ENST00000556009 AGBL3Q8NEM8 1001 aa22.73■■□□□ 1.23
NPC2-208ENST00000556009 DCPSQ96C86 337 aaKnown RBP22.73■■□□□ 1.23
NPC2-208ENST00000556009 NEURL1BA8MQ27 555 aa22.72■■□□□ 1.23
NPC2-208ENST00000556009 H7C1W4 665 aa22.72■■□□□ 1.23
NPC2-208ENST00000556009 SLC4A2P04920 1241 aa22.72■■□□□ 1.23
NPC2-208ENST00000556009 BRPF1P55201 1214 aaPredicted RBP22.72■■□□□ 1.23
NPC2-208ENST00000556009 ZNF280AP59817 542 aaPredicted RBP22.72■■□□□ 1.23
NPC2-208ENST00000556009 RBM26Q5T8P6 1007 aaKnown RBP22.72■■□□□ 1.23
NPC2-208ENST00000556009 BSDC1Q9NW68 430 aaPredicted RBP22.72■■□□□ 1.23
NPC2-208ENST00000556009 TSKSQ9UJT2 592 aa22.72■■□□□ 1.23
NPC2-208ENST00000556009 KIF4BQ2VIQ3 1234 aa22.71■■□□□ 1.23
NPC2-208ENST00000556009 RSBN1LQ6PCB5 846 aaPredicted RBP22.71■■□□□ 1.23
NPC2-208ENST00000556009 G2E3Q7L622 706 aa22.71■■□□□ 1.23
NPC2-208ENST00000556009 PODNQ7Z5L7 613 aa22.71■■□□□ 1.23
NPC2-208ENST00000556009 HUNKP57058 714 aa22.7■■□□□ 1.22
NPC2-208ENST00000556009 NOGQ13253 232 aa22.7■■□□□ 1.22
NPC2-208ENST00000556009 GMLQ99445 158 aa22.7■■□□□ 1.22
NPC2-208ENST00000556009 MINPP1Q9UNW1 487 aa22.7■■□□□ 1.22
NPC2-208ENST00000556009 CACNA1FO60840 1977 aa22.69■■□□□ 1.22
NPC2-208ENST00000556009 CWF19L2Q2TBE0 894 aaKnown RBP22.69■■□□□ 1.22
NPC2-208ENST00000556009 GREM2Q9H772 168 aa22.69■■□□□ 1.22
NPC2-208ENST00000556009 C2orf69Q8N8R5 385 aa22.68■■□□□ 1.22
NPC2-208ENST00000556009 PLA2G12BQ9BX93 195 aa22.68■■□□□ 1.22
NPC2-208ENST00000556009 GBA2Q9HCG7 927 aaPredicted RBP22.68■■□□□ 1.22
NPC2-208ENST00000556009 USP17L3A6NCW0 530 aa22.67■■□□□ 1.22
NPC2-208ENST00000556009 USP17L4A6NCW7 530 aa22.67■■□□□ 1.22
NPC2-208ENST00000556009 ADM5C9JUS6 153 aa22.67■■□□□ 1.22
NPC2-208ENST00000556009 RGMBQ6NW40 437 aa22.67■■□□□ 1.22
NPC2-208ENST00000556009 USP17L1Q7RTZ2 530 aa22.67■■□□□ 1.22
NPC2-208ENST00000556009 WDR63Q8IWG1 891 aa22.67■■□□□ 1.22
NPC2-208ENST00000556009 SULF1Q8IWU6 871 aa22.67■■□□□ 1.22
NPC2-208ENST00000556009 ABHD8Q96I13 439 aa22.67■■□□□ 1.22
NPC2-208ENST00000556009 ZIC5Q96T25 663 aa22.67■■□□□ 1.22
NPC2-208ENST00000556009 AKAP11Q9UKA4 1901 aa22.67■■□□□ 1.22
NPC2-208ENST00000556009 MED23Q9ULK4 1368 aa22.66■■□□□ 1.22
NPC2-208ENST00000556009 ASTN2O75129 1339 aaPredicted RBP22.66■■□□□ 1.22
NPC2-208ENST00000556009 USP17L8P0C7I0 530 aa22.66■■□□□ 1.22
NPC2-208ENST00000556009 FLIIQ13045 1269 aa22.66■■□□□ 1.22
NPC2-208ENST00000556009 GCKRQ14397 625 aa22.66■■□□□ 1.22
NPC2-208ENST00000556009 GGA3Q9NZ52 723 aa22.66■■□□□ 1.22
NPC2-208ENST00000556009 A0A1B0GUL6 1792 aa22.66■■□□□ 1.22
NPC2-208ENST00000556009 WTIPA6NIX2 430 aaPredicted RBP22.65■■□□□ 1.22
NPC2-208ENST00000556009 CCT4P50991 539 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms