RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 DBNDD1Q9H9R9 158 aa11.95□□□□□ -0.5
VIPAS39-207ENST00000555854 PODXL2Q9NZ53 605 aa11.95□□□□□ -0.5
VIPAS39-207ENST00000555854 MKRN1Q9UHC7 482 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-207ENST00000555854 NSFL1CQ9UNZ2 370 aaKnown RBP11.95□□□□□ -0.5
VIPAS39-207ENST00000555854 THSD7BQ9C0I4 1608 aa11.95□□□□□ -0.5
VIPAS39-207ENST00000555854 PSME4Q14997 1843 aa11.95□□□□□ -0.5
VIPAS39-207ENST00000555854 WTIPA6NIX2 430 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 H7C1W4 665 aa11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 LMOD1P29536 600 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 HIRAP54198 1017 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 CCDC152Q4G0S7 254 aa11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 CNTROBQ8N137 903 aa11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 TTLL11Q8NHH1 800 aa11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 TMX4Q9H1E5 349 aaPredicted RBP11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 GREM2Q9H772 168 aa11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 KCNQ5Q9NR82 932 aa11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 A0A1B0GUL6 1792 aa11.94□□□□□ -0.5
VIPAS39-207ENST00000555854 TRAF5O00463 557 aa11.93□□□□□ -0.5
VIPAS39-207ENST00000555854 PSMD14O00487 310 aa11.93□□□□□ -0.5
VIPAS39-207ENST00000555854 RIMBP2O15034 1052 aa11.93□□□□□ -0.5
VIPAS39-207ENST00000555854 EGFRP00533 1210 aa11.93□□□□□ -0.5
VIPAS39-207ENST00000555854 GCKRQ14397 625 aa11.93□□□□□ -0.5
VIPAS39-207ENST00000555854 USP50Q70EL3 339 aaPredicted RBP11.93□□□□□ -0.5
VIPAS39-207ENST00000555854 UBE3BQ7Z3V4 1068 aa11.93□□□□□ -0.5
VIPAS39-207ENST00000555854 DNAAF4Q8WXU2 420 aa11.93□□□□□ -0.5
VIPAS39-207ENST00000555854 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
VIPAS39-207ENST00000555854 ADARB2Q9NS39 739 aaKnown RBP11.93□□□□□ -0.5
VIPAS39-207ENST00000555854 ZBTB12Q9Y330 459 aaPredicted RBP11.93□□□□□ -0.5
VIPAS39-207ENST00000555854 TRPM7Q96QT4 1865 aa11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 F6X3S4 739 aa11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 C6orf229H3BNL8 230 aa11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 ECE2O60344 883 aa11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 UFL1O94874 794 aa11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 HSPA1AP0DMV8 641 aaKnown RBP11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 HSPA1BP0DMV9 641 aaKnown RBP11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 FKBP5Q13451 457 aaPredicted RBP11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 DOK7Q18PE1 504 aa11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 WASHC4Q2M389 1173 aa11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 FAM161AQ3B820 660 aa11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 PLA2G12BQ9BX93 195 aa11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 ZNF609O15014 1411 aa11.92□□□□□ -0.5
VIPAS39-207ENST00000555854 NEXNQ0ZGT2 675 aa11.91□□□□□ -0.5
VIPAS39-207ENST00000555854 BEND3Q5T5X7 828 aa11.91□□□□□ -0.5
VIPAS39-207ENST00000555854 MICALL2Q8IY33 904 aa11.91□□□□□ -0.5
VIPAS39-207ENST00000555854 LINS1Q8NG48 757 aa11.91□□□□□ -0.5
VIPAS39-207ENST00000555854 RASSF10A6NK89 507 aa11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 HSP90B1P14625 803 aaKnown RBP11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 VEGFBP49765 207 aa11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 TNIP1Q15025 636 aa11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 CST9Q5W186 159 aa11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 ANKRD18AQ8IVF6 992 aa11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 EYA3Q99504 573 aa11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 GLIS2Q9BZE0 524 aaPredicted RBP11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 MYH16Q9H6N6 1097 aa11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 PGAP2Q9UHJ9 254 aa11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 GGA1Q9UJY5 639 aa11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 MINPP1Q9UNW1 487 aa11.9□□□□□ -0.5
VIPAS39-207ENST00000555854 XDHP47989 1333 aa11.89□□□□□ -0.51
VIPAS39-207ENST00000555854 CSF1RP07333 972 aa11.89□□□□□ -0.51
VIPAS39-207ENST00000555854 KLRK1P26718 216 aa11.89□□□□□ -0.51
VIPAS39-207ENST00000555854 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
VIPAS39-207ENST00000555854 IFFO2Q5TF58 517 aa11.89□□□□□ -0.51
VIPAS39-207ENST00000555854 DLK2Q6UY11 383 aa11.89□□□□□ -0.51
VIPAS39-207ENST00000555854 CDC5LQ99459 802 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-207ENST00000555854 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
VIPAS39-207ENST00000555854 CNOT7Q9UIV1 285 aaKnown RBP11.89□□□□□ -0.51
VIPAS39-207ENST00000555854 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
VIPAS39-207ENST00000555854 IRS2Q9Y4H2 1338 aa11.88□□□□□ -0.51
VIPAS39-207ENST00000555854 ITGA6P23229 1130 aa11.88□□□□□ -0.51
VIPAS39-207ENST00000555854 FOXO4P98177 505 aa11.88□□□□□ -0.51
VIPAS39-207ENST00000555854 EPHA10Q5JZY3 1008 aa11.88□□□□□ -0.51
VIPAS39-207ENST00000555854 SAMD7Q7Z3H4 446 aa11.88□□□□□ -0.51
VIPAS39-207ENST00000555854 DPF2Q92785 391 aa11.88□□□□□ -0.51
VIPAS39-207ENST00000555854 BCL2L13Q9BXK5 485 aa11.88□□□□□ -0.51
VIPAS39-207ENST00000555854 BSDC1Q9NW68 430 aaPredicted RBP11.88□□□□□ -0.51
VIPAS39-207ENST00000555854 ASTN2O75129 1339 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-207ENST00000555854 VIL1P09327 827 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-207ENST00000555854 ATP2B4P23634 1241 aa11.87□□□□□ -0.51
VIPAS39-207ENST00000555854 TBC1D10BQ4KMP7 808 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-207ENST00000555854 TXNRD3Q86VQ6 643 aa11.87□□□□□ -0.51
VIPAS39-207ENST00000555854 GMLQ99445 158 aa11.87□□□□□ -0.51
VIPAS39-207ENST00000555854 ZC3H12CQ9C0D7 883 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-207ENST00000555854 SNAP23O00161 211 aa11.86□□□□□ -0.51
VIPAS39-207ENST00000555854 ZBTB22O15209 634 aa11.86□□□□□ -0.51
VIPAS39-207ENST00000555854 FOXN1O15353 648 aa11.86□□□□□ -0.51
VIPAS39-207ENST00000555854 RPS12P25398 132 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-207ENST00000555854 CCT4P50991 539 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-207ENST00000555854 ZC3H15Q8WU90 426 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-207ENST00000555854 KAZALD1Q96I82 304 aa11.86□□□□□ -0.51
VIPAS39-207ENST00000555854 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
VIPAS39-207ENST00000555854 RSBN1LQ6PCB5 846 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-207ENST00000555854 MRPL50Q8N5N7 158 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-207ENST00000555854 CDCA7LQ96GN5 454 aa11.85□□□□□ -0.51
VIPAS39-207ENST00000555854 ABT1Q9ULW3 272 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-207ENST00000555854 TLL2Q9Y6L7 1015 aa11.85□□□□□ -0.51
VIPAS39-207ENST00000555854 WDR33Q9C0J8 1336 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-207ENST00000555854 ADM5C9JUS6 153 aa11.84□□□□□ -0.51
VIPAS39-207ENST00000555854 H7C1D1 291 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms