RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 C7orf43Q8WVR3 580 aa15.42■□□□□ 0.06
SHMT2-221ENST00000555773 EXOC6BQ9Y2D4 811 aa15.42■□□□□ 0.06
SHMT2-221ENST00000555773 SOGA3Q5TF21 947 aa15.41■□□□□ 0.06
SHMT2-221ENST00000555773 CENPQQ7L2Z9 268 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-221ENST00000555773 NLGN2Q8NFZ4 835 aa15.41■□□□□ 0.06
SHMT2-221ENST00000555773 KIF1BPQ96EK5 621 aa15.41■□□□□ 0.06
SHMT2-221ENST00000555773 GTF3C3Q9Y5Q9 886 aa15.41■□□□□ 0.06
SHMT2-221ENST00000555773 LAMB2P55268 1798 aa15.41■□□□□ 0.06
SHMT2-221ENST00000555773 CHRNDQ07001 517 aa15.4■□□□□ 0.06
SHMT2-221ENST00000555773 METTL24Q5JXM2 366 aa15.4■□□□□ 0.06
SHMT2-221ENST00000555773 RHPN1Q8TCX5 695 aa15.4■□□□□ 0.06
SHMT2-221ENST00000555773 GPR108Q9NPR9 543 aa15.4■□□□□ 0.06
SHMT2-221ENST00000555773 PODXL2Q9NZ53 605 aa15.4■□□□□ 0.06
SHMT2-221ENST00000555773 TNRC6CQ9HCJ0 1690 aaKnown RBP15.4■□□□□ 0.06
SHMT2-221ENST00000555773 SASH1O94885 1247 aa15.39■□□□□ 0.05
SHMT2-221ENST00000555773 PDE8BO95263 885 aa15.39■□□□□ 0.05
SHMT2-221ENST00000555773 B4GALNT3Q6L9W6 998 aa15.39■□□□□ 0.05
SHMT2-221ENST00000555773 RTKN2Q8IZC4 609 aa15.39■□□□□ 0.05
SHMT2-221ENST00000555773 LRRCC1Q9C099 1032 aa15.39■□□□□ 0.05
SHMT2-221ENST00000555773 ZBTB47Q9UFB7 747 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-221ENST00000555773 AKAP2Q9Y2D5 859 aa15.39■□□□□ 0.05
SHMT2-221ENST00000555773 ANKRD31Q8N7Z5 1873 aa15.39■□□□□ 0.05
SHMT2-221ENST00000555773 KIF13BQ9NQT8 1826 aa15.38■□□□□ 0.05
SHMT2-221ENST00000555773 TFCP2Q12800 502 aa15.38■□□□□ 0.05
SHMT2-221ENST00000555773 ANKIB1Q9P2G1 1089 aa15.38■□□□□ 0.05
SHMT2-221ENST00000555773 NSFL1CQ9UNZ2 370 aaKnown RBP15.38■□□□□ 0.05
SHMT2-221ENST00000555773 LEMD3Q9Y2U8 911 aa15.38■□□□□ 0.05
SHMT2-221ENST00000555773 XDHP47989 1333 aa15.38■□□□□ 0.05
SHMT2-221ENST00000555773 KDM2BQ8NHM5 1336 aa15.38■□□□□ 0.05
SHMT2-221ENST00000555773 MYH3P11055 1940 aa15.37■□□□□ 0.05
SHMT2-221ENST00000555773 C21orf2O43822 256 aa15.37■□□□□ 0.05
SHMT2-221ENST00000555773 ATP2B4P23634 1241 aa15.37■□□□□ 0.05
SHMT2-221ENST00000555773 UBE4AQ14139 1066 aa15.37■□□□□ 0.05
SHMT2-221ENST00000555773 CCDC93Q567U6 631 aa15.37■□□□□ 0.05
SHMT2-221ENST00000555773 ANKRD45Q5TZF3 282 aa15.37■□□□□ 0.05
SHMT2-221ENST00000555773 CLASRPQ8N2M8 674 aaKnown RBP15.37■□□□□ 0.05
SHMT2-221ENST00000555773 MPNDQ8N594 471 aa15.37■□□□□ 0.05
SHMT2-221ENST00000555773 VGLL2Q8N8G2 317 aa15.37■□□□□ 0.05
SHMT2-221ENST00000555773 BCS1LQ9Y276 419 aa15.37■□□□□ 0.05
SHMT2-221ENST00000555773 APBB1O00213 710 aa15.36■□□□□ 0.05
SHMT2-221ENST00000555773 GPSM2P81274 684 aa15.36■□□□□ 0.05
SHMT2-221ENST00000555773 NUCB1Q02818 461 aa15.36■□□□□ 0.05
SHMT2-221ENST00000555773 PUM3Q15397 648 aaKnown RBP15.36■□□□□ 0.05
SHMT2-221ENST00000555773 DPP8Q6V1X1 898 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-221ENST00000555773 HELBQ8NG08 1087 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-221ENST00000555773 LPIN2Q92539 896 aa15.36■□□□□ 0.05
SHMT2-221ENST00000555773 GGA1Q9UJY5 639 aa15.36■□□□□ 0.05
SHMT2-221ENST00000555773 TAF5LO75529 589 aa15.35■□□□□ 0.05
SHMT2-221ENST00000555773 FGFR2P21802 821 aa15.35■□□□□ 0.05
SHMT2-221ENST00000555773 KCNJ4P48050 445 aa15.35■□□□□ 0.05
SHMT2-221ENST00000555773 SUPT20HQ8NEM7 779 aa15.35■□□□□ 0.05
SHMT2-221ENST00000555773 RTFDC1Q9BY42 306 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-221ENST00000555773 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-221ENST00000555773 SRCAPQ6ZRS2 3230 aa15.35■□□□□ 0.05
SHMT2-221ENST00000555773 IFIT1P09914 478 aaKnown RBP15.34■□□□□ 0.05
SHMT2-221ENST00000555773 ATP2B3Q16720 1220 aa15.34■□□□□ 0.05
SHMT2-221ENST00000555773 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
SHMT2-221ENST00000555773 CHD1LQ86WJ1 897 aa15.34■□□□□ 0.05
SHMT2-221ENST00000555773 TBC1D16Q8TBP0 767 aa15.34■□□□□ 0.05
SHMT2-221ENST00000555773 VPS33BQ9H267 617 aa15.34■□□□□ 0.05
SHMT2-221ENST00000555773 IL1RAPL2Q9NP60 686 aa15.34■□□□□ 0.05
SHMT2-221ENST00000555773 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
SHMT2-221ENST00000555773 ZNF804BA4D1E1 1349 aa15.34■□□□□ 0.05
SHMT2-221ENST00000555773 LRP5O75197 1615 aa15.33■□□□□ 0.04
SHMT2-221ENST00000555773 SLC5A1P13866 664 aa15.33■□□□□ 0.04
SHMT2-221ENST00000555773 TIMM10P62072 90 aa15.33■□□□□ 0.04
SHMT2-221ENST00000555773 OLFM4Q6UX06 510 aa15.33■□□□□ 0.04
SHMT2-221ENST00000555773 C15orf52Q6ZUT6 534 aaKnown RBP15.33■□□□□ 0.04
SHMT2-221ENST00000555773 EAF2Q96CJ1 260 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-221ENST00000555773 PSMD1Q99460 953 aa15.33■□□□□ 0.04
SHMT2-221ENST00000555773 EYA3Q99504 573 aa15.33■□□□□ 0.04
SHMT2-221ENST00000555773 POLLQ9UGP5 575 aa15.33■□□□□ 0.04
SHMT2-221ENST00000555773 A0A1B0GUL7 405 aa15.32■□□□□ 0.04
SHMT2-221ENST00000555773 C6orf229H3BNL8 230 aa15.32■□□□□ 0.04
SHMT2-221ENST00000555773 SMARCA5O60264 1052 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-221ENST00000555773 UFL1O94874 794 aa15.32■□□□□ 0.04
SHMT2-221ENST00000555773 IFIT2P09913 472 aaKnown RBP15.32■□□□□ 0.04
SHMT2-221ENST00000555773 AACSQ86V21 672 aa15.32■□□□□ 0.04
SHMT2-221ENST00000555773 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
SHMT2-221ENST00000555773 WWC3Q9ULE0 1092 aa15.32■□□□□ 0.04
SHMT2-221ENST00000555773 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-221ENST00000555773 COL11A2P13942 1736 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-221ENST00000555773 FKBP4Q02790 459 aaKnown RBP eCLIP15.31■□□□□ 0.04
SHMT2-221ENST00000555773 CAVIN4Q5BKX8 364 aa15.31■□□□□ 0.04
SHMT2-221ENST00000555773 ZC3H12CQ9C0D7 883 aaKnown RBP15.31■□□□□ 0.04
SHMT2-221ENST00000555773 COL4A1P02462 1669 aa15.31■□□□□ 0.04
SHMT2-221ENST00000555773 GRIN3BO60391 1043 aa15.3■□□□□ 0.04
SHMT2-221ENST00000555773 WASHC4Q2M389 1173 aa15.3■□□□□ 0.04
SHMT2-221ENST00000555773 SLC51AQ86UW1 340 aa15.3■□□□□ 0.04
SHMT2-221ENST00000555773 XAGE2Q96GT9 111 aa15.3■□□□□ 0.04
SHMT2-221ENST00000555773 LNPKQ9C0E8 428 aa15.3■□□□□ 0.04
SHMT2-221ENST00000555773 CCDC8Q9H0W5 538 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-221ENST00000555773 SLX4Q8IY92 1834 aa15.29■□□□□ 0.04
SHMT2-221ENST00000555773 KIAA1551Q9HCM1 1747 aa15.29■□□□□ 0.04
SHMT2-221ENST00000555773 LTBP3Q9NS15 1303 aa15.29■□□□□ 0.04
SHMT2-221ENST00000555773 WTIPA6NIX2 430 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-221ENST00000555773 SNAP23O00161 211 aa15.29■□□□□ 0.04
SHMT2-221ENST00000555773 GPR162Q16538 588 aa15.29■□□□□ 0.04
SHMT2-221ENST00000555773 GORABQ5T7V8 394 aa15.29■□□□□ 0.04
SHMT2-221ENST00000555773 FBXO33Q7Z6M2 555 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms