RNA–Protein interactions for RNA: ENST00000555561.5

SDR39U1-213, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 452 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-213ENST00000555561 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
SDR39U1-213ENST00000555561 NHSQ6T4R5 1651 aa13.84□□□□□ -0.19
SDR39U1-213ENST00000555561 A0A1B0GUL7 405 aa13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 IRS4O14654 1257 aaPredicted RBP13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 SSFA2P28290 1259 aa13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 CRKLP46109 303 aaKnown RBP13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 EN1Q05925 392 aaPredicted RBP13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 NMIQ13287 307 aaPredicted RBP13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 TMED8Q6PL24 325 aaPredicted RBP13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 TNPO1Q92973 898 aaKnown RBP13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 TTC14Q96N46 770 aa13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 SLC4A9Q96Q91 983 aa13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 PAG1Q9NWQ8 432 aa13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 ATP6V1DQ9Y5K8 247 aa13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 RPAP1Q9BWH6 1393 aaPredicted RBP13.83□□□□□ -0.2
SDR39U1-213ENST00000555561 ZBTB22O15209 634 aa13.82□□□□□ -0.2
SDR39U1-213ENST00000555561 IFIT1P09914 478 aaKnown RBP13.82□□□□□ -0.2
SDR39U1-213ENST00000555561 UQCRFS1P1P0C7P4 283 aa13.82□□□□□ -0.2
SDR39U1-213ENST00000555561 GORABQ5T7V8 394 aa13.82□□□□□ -0.2
SDR39U1-213ENST00000555561 RUFY3Q7L099 469 aa13.82□□□□□ -0.2
SDR39U1-213ENST00000555561 DBNDD2Q9BQY9 259 aa13.82□□□□□ -0.2
SDR39U1-213ENST00000555561 UTP14AQ9BVJ6 771 aaKnown RBP13.82□□□□□ -0.2
SDR39U1-213ENST00000555561 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.82□□□□□ -0.2
SDR39U1-213ENST00000555561 TLR7Q9NYK1 1049 aaKnown RBP13.82□□□□□ -0.2
SDR39U1-213ENST00000555561 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
SDR39U1-213ENST00000555561 ARAP2Q8WZ64 1704 aa13.81□□□□□ -0.2
SDR39U1-213ENST00000555561 MAP4K4O95819 1239 aaPredicted RBP13.81□□□□□ -0.2
SDR39U1-213ENST00000555561 CCDC152Q4G0S7 254 aa13.81□□□□□ -0.2
SDR39U1-213ENST00000555561 CREB3L3Q68CJ9 461 aa13.81□□□□□ -0.2
SDR39U1-213ENST00000555561 INTS5Q6P9B9 1019 aaKnown RBP13.81□□□□□ -0.2
SDR39U1-213ENST00000555561 LDHAL6AQ6ZMR3 332 aa13.81□□□□□ -0.2
SDR39U1-213ENST00000555561 KLHDC4Q8TBB5 520 aa13.81□□□□□ -0.2
SDR39U1-213ENST00000555561 CTNNA3Q9UI47 895 aa13.81□□□□□ -0.2
SDR39U1-213ENST00000555561 PALD1Q9ULE6 856 aa13.81□□□□□ -0.2
SDR39U1-213ENST00000555561 ZNF330Q9Y3S2 320 aaPredicted RBP13.81□□□□□ -0.2
SDR39U1-213ENST00000555561 WDR33Q9C0J8 1336 aaKnown RBP13.81□□□□□ -0.2
SDR39U1-213ENST00000555561 SCN7AQ01118 1682 aa13.8□□□□□ -0.2
SDR39U1-213ENST00000555561 TRIM37O94972 964 aa13.8□□□□□ -0.2
SDR39U1-213ENST00000555561 PDCP20941 246 aa13.8□□□□□ -0.2
SDR39U1-213ENST00000555561 ITGA6P23229 1130 aa13.8□□□□□ -0.2
SDR39U1-213ENST00000555561 ATP2B3Q16720 1220 aa13.8□□□□□ -0.2
SDR39U1-213ENST00000555561 TTC39AQ5SRH9 613 aa13.8□□□□□ -0.2
SDR39U1-213ENST00000555561 BLOC1S2Q6QNY1 142 aa13.8□□□□□ -0.2
SDR39U1-213ENST00000555561 FAM89AQ96GI7 184 aa13.8□□□□□ -0.2
SDR39U1-213ENST00000555561 NEUROD6Q96NK8 337 aa13.8□□□□□ -0.2
SDR39U1-213ENST00000555561 CDC5LQ99459 802 aaKnown RBP13.8□□□□□ -0.2
SDR39U1-213ENST00000555561 RIPOR2Q9Y4F9 1068 aa13.8□□□□□ -0.2
SDR39U1-213ENST00000555561 TRAK2O60296 914 aa13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 TAF5LO75529 589 aa13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 CAMTA2O94983 1202 aa13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 CASTP20810 708 aaKnown RBP13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 PUM3Q15397 648 aaKnown RBP13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 CSPP1Q1MSJ5 1256 aa13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 ZMYM1Q5SVZ6 1142 aa13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 SPRYD3Q8NCJ5 442 aa13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 LPIN2Q92539 896 aa13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 NYXQ9GZU5 481 aa13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 PDRG1Q9NUG6 133 aa13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 CARMIL3Q8ND23 1372 aa13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 RIC1Q4ADV7 1423 aa13.79□□□□□ -0.2
SDR39U1-213ENST00000555561 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 SLC27A2O14975 620 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 RNF113AO15541 343 aaKnown RBP13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 PDE8BO95263 885 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 MBD3O95983 291 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 HLFQ16534 295 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 METTL24Q5JXM2 366 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 PRPF40BQ6NWY9 871 aaKnown RBP13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 FBXL16Q8N461 479 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 JAKMIP1Q96N16 626 aaKnown RBP13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 CAMKK2Q96RR4 588 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 DNAJC2Q99543 621 aaKnown RBP13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 IL25Q9H293 177 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 CNNM1Q9NRU3 951 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 KIF3AQ9Y496 699 aa13.78□□□□□ -0.2
SDR39U1-213ENST00000555561 BAG4O95429 457 aaKnown RBP13.77□□□□□ -0.21
SDR39U1-213ENST00000555561 BRD1O95696 1058 aa13.77□□□□□ -0.21
SDR39U1-213ENST00000555561 APBA3O96018 575 aa13.77□□□□□ -0.21
SDR39U1-213ENST00000555561 ARID4AP29374 1257 aaPredicted RBP13.77□□□□□ -0.21
SDR39U1-213ENST00000555561 PTH1RQ03431 593 aa13.77□□□□□ -0.21
SDR39U1-213ENST00000555561 LRRC24Q50LG9 513 aa13.77□□□□□ -0.21
SDR39U1-213ENST00000555561 RGS22Q8NE09 1264 aa13.77□□□□□ -0.21
SDR39U1-213ENST00000555561 XAGE2Q96GT9 111 aa13.77□□□□□ -0.21
SDR39U1-213ENST00000555561 FAM227BQ96M60 508 aa13.77□□□□□ -0.21
SDR39U1-213ENST00000555561 TNS1Q9HBL0 1735 aaKnown RBP13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 ZMYM6O95789 1325 aa13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 UBN2Q6ZU65 1347 aa13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 WDR19Q8NEZ3 1342 aa13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 PSDA5PKW4 1024 aaPredicted RBP13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 SLC5A1P13866 664 aa13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 IGHMBP2P38935 993 aaKnown RBP13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 AK2P54819 239 aa13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 VGLL2Q8N8G2 317 aa13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 APPBP2Q92624 585 aa13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 ARXQ96QS3 562 aa13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 UPF3BQ9BZI7 483 aaKnown RBP13.76□□□□□ -0.21
SDR39U1-213ENST00000555561 KAT6BQ8WYB5 2073 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms