RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CASP8AP2Q9UKL3 1982 aa13.3□□□□□ -0.28
TMEM260-206ENST00000555046 ABCC4O15439 1325 aa13.3□□□□□ -0.28
TMEM260-206ENST00000555046 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
TMEM260-206ENST00000555046 UBTFL1P0CB47 393 aaPredicted RBP13.29□□□□□ -0.28
TMEM260-206ENST00000555046 PSMD1Q99460 953 aa13.29□□□□□ -0.28
TMEM260-206ENST00000555046 LTBP3Q9NS15 1303 aa13.29□□□□□ -0.28
TMEM260-206ENST00000555046 GLTPD2A6NH11 291 aa13.28□□□□□ -0.28
TMEM260-206ENST00000555046 POTECB2RU33 542 aa13.28□□□□□ -0.28
TMEM260-206ENST00000555046 NBPF7P0C2Y1 421 aaPredicted RBP13.28□□□□□ -0.28
TMEM260-206ENST00000555046 FKBP4Q02790 459 aaKnown RBP eCLIP13.28□□□□□ -0.28
TMEM260-206ENST00000555046 TAF7LQ5H9L4 462 aa13.28□□□□□ -0.28
TMEM260-206ENST00000555046 LMBR1LQ6UX01 489 aa13.28□□□□□ -0.28
TMEM260-206ENST00000555046 MPNDQ8N594 471 aa13.28□□□□□ -0.28
TMEM260-206ENST00000555046 MPHOSPH8Q99549 860 aa13.28□□□□□ -0.28
TMEM260-206ENST00000555046 BSDC1Q9NW68 430 aaPredicted RBP13.28□□□□□ -0.28
TMEM260-206ENST00000555046 A0A0C4DFX4 3053 aa13.28□□□□□ -0.28
TMEM260-206ENST00000555046 ITGA6P23229 1130 aa13.27□□□□□ -0.29
TMEM260-206ENST00000555046 FOXO4P98177 505 aa13.27□□□□□ -0.29
TMEM260-206ENST00000555046 DPP8Q6V1X1 898 aaPredicted RBP13.27□□□□□ -0.29
TMEM260-206ENST00000555046 CLUAP1Q96AJ1 413 aa13.27□□□□□ -0.29
TMEM260-206ENST00000555046 CCDC85AQ96PX6 553 aaPredicted RBP13.27□□□□□ -0.29
TMEM260-206ENST00000555046 GREM2Q9H772 168 aa13.27□□□□□ -0.29
TMEM260-206ENST00000555046 CHMP3Q9Y3E7 222 aa13.27□□□□□ -0.29
TMEM260-206ENST00000555046 RTL9Q8NET4 1388 aa13.27□□□□□ -0.29
TMEM260-206ENST00000555046 AFDNP55196 1824 aaKnown RBP13.26□□□□□ -0.29
TMEM260-206ENST00000555046 CELF1Q92879 486 aaKnown RBP13.26□□□□□ -0.29
TMEM260-206ENST00000555046 MCOLN1Q9GZU1 580 aa13.26□□□□□ -0.29
TMEM260-206ENST00000555046 ANKRD2Q9GZV1 360 aa13.26□□□□□ -0.29
TMEM260-206ENST00000555046 SEC31BQ9NQW1 1179 aa13.26□□□□□ -0.29
TMEM260-206ENST00000555046 ANKIB1Q9P2G1 1089 aa13.26□□□□□ -0.29
TMEM260-206ENST00000555046 NSFL1CQ9UNZ2 370 aaKnown RBP13.26□□□□□ -0.29
TMEM260-206ENST00000555046 PASKQ96RG2 1323 aa13.25□□□□□ -0.29
TMEM260-206ENST00000555046 RASSF7Q02833 373 aa13.25□□□□□ -0.29
TMEM260-206ENST00000555046 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
TMEM260-206ENST00000555046 RABL6Q3YEC7 729 aaPredicted RBP13.25□□□□□ -0.29
TMEM260-206ENST00000555046 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
TMEM260-206ENST00000555046 DPY19L2Q6NUT2 758 aa13.25□□□□□ -0.29
TMEM260-206ENST00000555046 JDP2Q8WYK2 163 aa13.25□□□□□ -0.29
TMEM260-206ENST00000555046 SUCLG2Q96I99 432 aa13.25□□□□□ -0.29
TMEM260-206ENST00000555046 EYA3Q99504 573 aa13.25□□□□□ -0.29
TMEM260-206ENST00000555046 RTFDC1Q9BY42 306 aaPredicted RBP13.25□□□□□ -0.29
TMEM260-206ENST00000555046 NFKBIEO00221 500 aa13.24□□□□□ -0.29
TMEM260-206ENST00000555046 GNAI2P04899 355 aa13.24□□□□□ -0.29
TMEM260-206ENST00000555046 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
TMEM260-206ENST00000555046 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
TMEM260-206ENST00000555046 ATP2B4P23634 1241 aa13.24□□□□□ -0.29
TMEM260-206ENST00000555046 LDHAL6AQ6ZMR3 332 aa13.24□□□□□ -0.29
TMEM260-206ENST00000555046 ITPRIPQ8IWB1 547 aa13.24□□□□□ -0.29
TMEM260-206ENST00000555046 BICC1Q9H694 974 aaKnown RBP13.24□□□□□ -0.29
TMEM260-206ENST00000555046 PODXL2Q9NZ53 605 aa13.24□□□□□ -0.29
TMEM260-206ENST00000555046 DICER1Q9UPY3 1922 aaKnown RBP13.23□□□□□ -0.29
TMEM260-206ENST00000555046 C6orf229H3BNL8 230 aa13.23□□□□□ -0.29
TMEM260-206ENST00000555046 IARSP41252 1262 aaKnown RBP13.23□□□□□ -0.29
TMEM260-206ENST00000555046 MAP2K1Q02750 393 aaPredicted RBP13.23□□□□□ -0.29
TMEM260-206ENST00000555046 TMEM57Q8N5G2 664 aa13.23□□□□□ -0.29
TMEM260-206ENST00000555046 WASHC4Q2M389 1173 aa13.22□□□□□ -0.29
TMEM260-206ENST00000555046 EPHA10Q5JZY3 1008 aa13.22□□□□□ -0.29
TMEM260-206ENST00000555046 LARGE2Q8N3Y3 721 aa13.22□□□□□ -0.29
TMEM260-206ENST00000555046 ZC3H12CQ9C0D7 883 aaKnown RBP13.22□□□□□ -0.29
TMEM260-206ENST00000555046 ZNF277Q9NRM2 450 aaPredicted RBP13.22□□□□□ -0.29
TMEM260-206ENST00000555046 GGA1Q9UJY5 639 aa13.22□□□□□ -0.29
TMEM260-206ENST00000555046 FBXO3Q9UK99 471 aa13.22□□□□□ -0.29
TMEM260-206ENST00000555046 DDX19BQ9UMR2 479 aa13.22□□□□□ -0.29
TMEM260-206ENST00000555046 MINPP1Q9UNW1 487 aa13.22□□□□□ -0.29
TMEM260-206ENST00000555046 LEMD3Q9Y2U8 911 aa13.22□□□□□ -0.29
TMEM260-206ENST00000555046 ARFGEF2Q9Y6D5 1785 aa13.22□□□□□ -0.29
TMEM260-206ENST00000555046 XDHP47989 1333 aa13.21□□□□□ -0.29
TMEM260-206ENST00000555046 G3V3G9 751 aa13.21□□□□□ -0.29
TMEM260-206ENST00000555046 ZBTB7BO15156 539 aaPredicted RBP13.21□□□□□ -0.29
TMEM260-206ENST00000555046 DCAF8Q5TAQ9 597 aa13.21□□□□□ -0.29
TMEM260-206ENST00000555046 OLFM4Q6UX06 510 aa13.21□□□□□ -0.29
TMEM260-206ENST00000555046 KAZALD1Q96I82 304 aa13.21□□□□□ -0.29
TMEM260-206ENST00000555046 MEIS3Q99687 375 aa13.21□□□□□ -0.29
TMEM260-206ENST00000555046 CNNM1Q9NRU3 951 aa13.21□□□□□ -0.29
TMEM260-206ENST00000555046 LRRFIP2Q9Y608 721 aaKnown RBP13.21□□□□□ -0.29
TMEM260-206ENST00000555046 TMEM88BA6NKF7 163 aa13.2□□□□□ -0.3
TMEM260-206ENST00000555046 PPIP5K2O43314 1243 aa13.2□□□□□ -0.3
TMEM260-206ENST00000555046 KCNJ4P48050 445 aa13.2□□□□□ -0.3
TMEM260-206ENST00000555046 EIF6P56537 245 aaKnown RBP13.2□□□□□ -0.3
TMEM260-206ENST00000555046 SOX10P56693 466 aa13.2□□□□□ -0.3
TMEM260-206ENST00000555046 GPSM2P81274 684 aa13.2□□□□□ -0.3
TMEM260-206ENST00000555046 NIM1KQ8IY84 436 aa13.2□□□□□ -0.3
TMEM260-206ENST00000555046 ANKRD44Q8N8A2 993 aa13.2□□□□□ -0.3
TMEM260-206ENST00000555046 DLEC1Q9Y238 1755 aa13.2□□□□□ -0.3
TMEM260-206ENST00000555046 SZT2Q5T011 3432 aa13.19□□□□□ -0.3
TMEM260-206ENST00000555046 MROH5Q6ZUA9 1318 aa13.19□□□□□ -0.3
TMEM260-206ENST00000555046 RASSF10A6NK89 507 aa13.19□□□□□ -0.3
TMEM260-206ENST00000555046 KIAA2012Q0VF49 1180 aa13.19□□□□□ -0.3
TMEM260-206ENST00000555046 MVPQ14764 893 aaKnown RBP13.19□□□□□ -0.3
TMEM260-206ENST00000555046 TBC1D16Q8TBP0 767 aa13.19□□□□□ -0.3
TMEM260-206ENST00000555046 TSKSQ9UJT2 592 aa13.19□□□□□ -0.3
TMEM260-206ENST00000555046 ANKRD36CQ5JPF3 1778 aa13.19□□□□□ -0.3
TMEM260-206ENST00000555046 WDR33Q9C0J8 1336 aaKnown RBP13.18□□□□□ -0.3
TMEM260-206ENST00000555046 PLIN1O60240 522 aa13.18□□□□□ -0.3
TMEM260-206ENST00000555046 UFL1O94874 794 aa13.18□□□□□ -0.3
TMEM260-206ENST00000555046 RLBP1P12271 317 aa13.18□□□□□ -0.3
TMEM260-206ENST00000555046 CHRNDQ07001 517 aa13.18□□□□□ -0.3
TMEM260-206ENST00000555046 MTX1Q13505 466 aa13.18□□□□□ -0.3
TMEM260-206ENST00000555046 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
TMEM260-206ENST00000555046 POLLQ9UGP5 575 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms