RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 SP8Q8IXZ3 490 aa10.01□□□□□ -0.81
LINC01397-201ENST00000554808 ANKRD2Q9GZV1 360 aa10.01□□□□□ -0.81
LINC01397-201ENST00000554808 COPRSQ9NQ92 184 aa10.01□□□□□ -0.81
LINC01397-201ENST00000554808 ATP6V0A2Q9Y487 856 aa10.01□□□□□ -0.81
LINC01397-201ENST00000554808 COL4A1P02462 1669 aa10.01□□□□□ -0.81
LINC01397-201ENST00000554808 WDR90Q96KV7 1748 aa10.01□□□□□ -0.81
LINC01397-201ENST00000554808 MROH5Q6ZUA9 1318 aa10.01□□□□□ -0.81
LINC01397-201ENST00000554808 GRIN3BO60391 1043 aa10□□□□□ -0.81
LINC01397-201ENST00000554808 LDHAL6AQ6ZMR3 332 aa10□□□□□ -0.81
LINC01397-201ENST00000554808 RTKN2Q8IZC4 609 aa10□□□□□ -0.81
LINC01397-201ENST00000554808 SUPT20HQ8NEM7 779 aa10□□□□□ -0.81
LINC01397-201ENST00000554808 CELF1Q92879 486 aaKnown RBP10□□□□□ -0.81
LINC01397-201ENST00000554808 VPS33BQ9H267 617 aa10□□□□□ -0.81
LINC01397-201ENST00000554808 SEC31BQ9NQW1 1179 aa10□□□□□ -0.81
LINC01397-201ENST00000554808 CNNM1Q9NRU3 951 aa10□□□□□ -0.81
LINC01397-201ENST00000554808 BCS1LQ9Y276 419 aa10□□□□□ -0.81
LINC01397-201ENST00000554808 XDHP47989 1333 aa10□□□□□ -0.81
LINC01397-201ENST00000554808 LTBP3Q9NS15 1303 aa10□□□□□ -0.81
LINC01397-201ENST00000554808 DUOX1Q9NRD9 1551 aa10□□□□□ -0.81
LINC01397-201ENST00000554808 ZNF646O15015 1829 aaPredicted RBP9.99□□□□□ -0.81
LINC01397-201ENST00000554808 ECM29Q5VYK3 1845 aa9.99□□□□□ -0.81
LINC01397-201ENST00000554808 IL15P40933 162 aaPredicted RBP9.99□□□□□ -0.81
LINC01397-201ENST00000554808 RFX5P48382 616 aaPredicted RBP9.99□□□□□ -0.81
LINC01397-201ENST00000554808 PTPN12Q05209 780 aaKnown RBP9.99□□□□□ -0.81
LINC01397-201ENST00000554808 ERC1Q8IUD2 1116 aa9.99□□□□□ -0.81
LINC01397-201ENST00000554808 CCDC85AQ96PX6 553 aaPredicted RBP9.99□□□□□ -0.81
LINC01397-201ENST00000554808 C1orf115Q9H7X2 142 aa9.99□□□□□ -0.81
LINC01397-201ENST00000554808 PODXL2Q9NZ53 605 aa9.99□□□□□ -0.81
LINC01397-201ENST00000554808 SNED1Q8TER0 1413 aa9.99□□□□□ -0.81
LINC01397-201ENST00000554808 AKAP11Q9UKA4 1901 aa9.98□□□□□ -0.81
LINC01397-201ENST00000554808 PNMA6EA0A0J9YXQ4 647 aa9.98□□□□□ -0.81
LINC01397-201ENST00000554808 EYA2O00167 538 aa9.98□□□□□ -0.81
LINC01397-201ENST00000554808 G3BP1Q13283 466 aaKnown RBP eCLIP9.98□□□□□ -0.81
LINC01397-201ENST00000554808 EXOC6Q8TAG9 804 aa9.98□□□□□ -0.81
LINC01397-201ENST00000554808 C7orf43Q8WVR3 580 aa9.98□□□□□ -0.81
LINC01397-201ENST00000554808 PSMD1Q99460 953 aa9.98□□□□□ -0.81
LINC01397-201ENST00000554808 EYA3Q99504 573 aa9.98□□□□□ -0.81
LINC01397-201ENST00000554808 LEMD3Q9Y2U8 911 aa9.98□□□□□ -0.81
LINC01397-201ENST00000554808 NOP58Q9Y2X3 529 aaKnown RBP9.98□□□□□ -0.81
LINC01397-201ENST00000554808 C21orf2O43822 256 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 RAB11FIP3O75154 756 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 ATP2B4P23634 1241 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 HDAC1Q13547 482 aaPredicted RBP9.97□□□□□ -0.81
LINC01397-201ENST00000554808 UBE4AQ14139 1066 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 DPP8Q6V1X1 898 aaPredicted RBP9.97□□□□□ -0.81
LINC01397-201ENST00000554808 MPNDQ8N594 471 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 GCC1Q96CN9 775 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 RWDD1Q9H446 243 aaPredicted RBP9.97□□□□□ -0.81
LINC01397-201ENST00000554808 ANKIB1Q9P2G1 1089 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 AKAP2Q9Y2D5 859 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 RIPOR2Q9Y4F9 1068 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 SCN4AP35499 1836 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 DOCK2Q92608 1830 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 MYO5AQ9Y4I1 1855 aaKnown RBP9.97□□□□□ -0.81
LINC01397-201ENST00000554808 SCN9AQ15858 1988 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 PCNTO95613 3336 aa9.97□□□□□ -0.81
LINC01397-201ENST00000554808 SURF6O75683 361 aaKnown RBP9.96□□□□□ -0.82
LINC01397-201ENST00000554808 FKBP4Q02790 459 aaKnown RBP eCLIP9.96□□□□□ -0.82
LINC01397-201ENST00000554808 CHRNDQ07001 517 aa9.96□□□□□ -0.82
LINC01397-201ENST00000554808 OS9Q13438 667 aaPredicted RBP9.96□□□□□ -0.82
LINC01397-201ENST00000554808 METTL24Q5JXM2 366 aa9.96□□□□□ -0.82
LINC01397-201ENST00000554808 ZNF526Q8TF50 670 aaPredicted RBP9.96□□□□□ -0.82
LINC01397-201ENST00000554808 KIF1BPQ96EK5 621 aa9.96□□□□□ -0.82
LINC01397-201ENST00000554808 ZNF594Q96JF6 807 aaPredicted RBP9.96□□□□□ -0.82
LINC01397-201ENST00000554808 RTFDC1Q9BY42 306 aaPredicted RBP9.96□□□□□ -0.82
LINC01397-201ENST00000554808 TAOK3Q9H2K8 898 aa9.96□□□□□ -0.82
LINC01397-201ENST00000554808 GPBP1L1Q9HC44 474 aaPredicted RBP9.96□□□□□ -0.82
LINC01397-201ENST00000554808 GPR108Q9NPR9 543 aa9.96□□□□□ -0.82
LINC01397-201ENST00000554808 CEP126Q9P2H0 1117 aa9.96□□□□□ -0.82
LINC01397-201ENST00000554808 GGA1Q9UJY5 639 aa9.96□□□□□ -0.82
LINC01397-201ENST00000554808 WWC3Q9ULE0 1092 aa9.96□□□□□ -0.82
LINC01397-201ENST00000554808 MINPP1Q9UNW1 487 aa9.96□□□□□ -0.82
LINC01397-201ENST00000554808 MED23Q9ULK4 1368 aa9.96□□□□□ -0.82
LINC01397-201ENST00000554808 MAST2Q6P0Q8 1798 aa9.96□□□□□ -0.82
LINC01397-201ENST00000554808 PDE8BO95263 885 aa9.95□□□□□ -0.82
LINC01397-201ENST00000554808 HSPA6P17066 643 aa9.95□□□□□ -0.82
LINC01397-201ENST00000554808 KCNJ4P48050 445 aa9.95□□□□□ -0.82
LINC01397-201ENST00000554808 PUM3Q15397 648 aaKnown RBP9.95□□□□□ -0.82
LINC01397-201ENST00000554808 ATG9AQ7Z3C6 839 aa9.95□□□□□ -0.82
LINC01397-201ENST00000554808 SIL1Q9H173 461 aa9.95□□□□□ -0.82
LINC01397-201ENST00000554808 ZBTB47Q9UFB7 747 aaPredicted RBP9.95□□□□□ -0.82
LINC01397-201ENST00000554808 NSFL1CQ9UNZ2 370 aaKnown RBP9.95□□□□□ -0.82
LINC01397-201ENST00000554808 ZC3H4Q9UPT8 1303 aaKnown RBP9.95□□□□□ -0.82
LINC01397-201ENST00000554808 ZNF609O15014 1411 aa9.95□□□□□ -0.82
LINC01397-201ENST00000554808 MYH2Q9UKX2 1941 aa9.95□□□□□ -0.82
LINC01397-201ENST00000554808 ZNF804BA4D1E1 1349 aa9.94□□□□□ -0.82
LINC01397-201ENST00000554808 UFL1O94874 794 aa9.94□□□□□ -0.82
LINC01397-201ENST00000554808 IFIT1P09914 478 aaKnown RBP9.94□□□□□ -0.82
LINC01397-201ENST00000554808 IRX6P78412 446 aaPredicted RBP9.94□□□□□ -0.82
LINC01397-201ENST00000554808 LRRC24Q50LG9 513 aa9.94□□□□□ -0.82
LINC01397-201ENST00000554808 C15orf52Q6ZUT6 534 aaKnown RBP9.94□□□□□ -0.82
LINC01397-201ENST00000554808 SIRT2Q8IXJ6 389 aa9.94□□□□□ -0.82
LINC01397-201ENST00000554808 VGLL2Q8N8G2 317 aa9.94□□□□□ -0.82
LINC01397-201ENST00000554808 KLHDC4Q8TBB5 520 aa9.94□□□□□ -0.82
LINC01397-201ENST00000554808 DCTPP1Q9H773 170 aa9.94□□□□□ -0.82
LINC01397-201ENST00000554808 PA2G4Q9UQ80 394 aaKnown RBP9.94□□□□□ -0.82
LINC01397-201ENST00000554808 PCDHB15Q9Y5E8 787 aa9.94□□□□□ -0.82
LINC01397-201ENST00000554808 C6orf229H3BNL8 230 aa9.93□□□□□ -0.82
LINC01397-201ENST00000554808 KIF3CO14782 793 aa9.93□□□□□ -0.82
LINC01397-201ENST00000554808 SLC5A1P13866 664 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms