RNA–Protein interactions for RNA: ENST00000554628.5

PTPN21-206, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 1,571 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-206ENST00000554628 RRP1P56182 461 aaKnown RBP22.72■■□□□ 1.23
PTPN21-206ENST00000554628 TAF7LQ5H9L4 462 aa22.72■■□□□ 1.23
PTPN21-206ENST00000554628 A0A1B0GUL6 1792 aa22.71■■□□□ 1.23
PTPN21-206ENST00000554628 TIAM2Q8IVF5 1701 aa22.71■■□□□ 1.23
PTPN21-206ENST00000554628 RTFDC1Q9BY42 306 aaPredicted RBP22.71■■□□□ 1.23
PTPN21-206ENST00000554628 MINPP1Q9UNW1 487 aa22.71■■□□□ 1.23
PTPN21-206ENST00000554628 LDHAL6AQ6ZMR3 332 aa22.69■■□□□ 1.22
PTPN21-206ENST00000554628 PODXL2Q9NZ53 605 aa22.69■■□□□ 1.22
PTPN21-206ENST00000554628 ANKIB1Q9P2G1 1089 aa22.69■■□□□ 1.22
PTPN21-206ENST00000554628 DDX19BQ9UMR2 479 aa22.69■■□□□ 1.22
PTPN21-206ENST00000554628 YY1P25490 414 aa22.68■■□□□ 1.22
PTPN21-206ENST00000554628 IARSP41252 1262 aaKnown RBP22.68■■□□□ 1.22
PTPN21-206ENST00000554628 RFX5P48382 616 aaPredicted RBP22.68■■□□□ 1.22
PTPN21-206ENST00000554628 SUPT20HQ8NEM7 779 aa22.68■■□□□ 1.22
PTPN21-206ENST00000554628 KLHDC4Q8TBB5 520 aa22.68■■□□□ 1.22
PTPN21-206ENST00000554628 C1orf115Q9H7X2 142 aa22.68■■□□□ 1.22
PTPN21-206ENST00000554628 POLLQ9UGP5 575 aa22.68■■□□□ 1.22
PTPN21-206ENST00000554628 XDHP47989 1333 aa22.67■■□□□ 1.22
PTPN21-206ENST00000554628 TBC1D16Q8TBP0 767 aa22.67■■□□□ 1.22
PTPN21-206ENST00000554628 PUS3Q9BZE2 481 aaKnown RBP22.67■■□□□ 1.22
PTPN21-206ENST00000554628 CNNM1Q9NRU3 951 aa22.67■■□□□ 1.22
PTPN21-206ENST00000554628 C6orf229H3BNL8 230 aa22.66■■□□□ 1.22
PTPN21-206ENST00000554628 PTPN12Q05209 780 aaKnown RBP22.66■■□□□ 1.22
PTPN21-206ENST00000554628 CHRNDQ07001 517 aa22.66■■□□□ 1.22
PTPN21-206ENST00000554628 MTX1Q13505 466 aa22.66■■□□□ 1.22
PTPN21-206ENST00000554628 COL4A5P29400 1685 aa22.66■■□□□ 1.22
PTPN21-206ENST00000554628 AOC3Q16853 763 aa22.65■■□□□ 1.22
PTPN21-206ENST00000554628 GGA1Q9UJY5 639 aa22.65■■□□□ 1.22
PTPN21-206ENST00000554628 WTIPA6NIX2 430 aaPredicted RBP22.64■■□□□ 1.22
PTPN21-206ENST00000554628 SRGAP3O43295 1099 aa22.64■■□□□ 1.22
PTPN21-206ENST00000554628 PPIP5K2O43314 1243 aa22.64■■□□□ 1.22
PTPN21-206ENST00000554628 UFL1O94874 794 aa22.64■■□□□ 1.22
PTPN21-206ENST00000554628 LRRC24Q50LG9 513 aa22.64■■□□□ 1.22
PTPN21-206ENST00000554628 GPR101Q96P66 508 aaPredicted RBP22.64■■□□□ 1.22
PTPN21-206ENST00000554628 ANKRD2Q9GZV1 360 aa22.64■■□□□ 1.22
PTPN21-206ENST00000554628 VPS33BQ9H267 617 aa22.64■■□□□ 1.22
PTPN21-206ENST00000554628 ATP2B4P23634 1241 aa22.63■■□□□ 1.21
PTPN21-206ENST00000554628 KIAA2012Q0VF49 1180 aa22.63■■□□□ 1.21
PTPN21-206ENST00000554628 WASHC4Q2M389 1173 aa22.63■■□□□ 1.21
PTPN21-206ENST00000554628 LARGE2Q8N3Y3 721 aa22.63■■□□□ 1.21
PTPN21-206ENST00000554628 RIPOR2Q9Y4F9 1068 aa22.63■■□□□ 1.21
PTPN21-206ENST00000554628 PNMA6EA0A0J9YXQ4 647 aa22.63■■□□□ 1.21
PTPN21-206ENST00000554628 HELBQ8NG08 1087 aaPredicted RBP22.63■■□□□ 1.21
PTPN21-206ENST00000554628 ZBTB40Q9NUA8 1239 aa22.63■■□□□ 1.21
PTPN21-206ENST00000554628 ZC3H4Q9UPT8 1303 aaKnown RBP22.62■■□□□ 1.21
PTPN21-206ENST00000554628 TAF5LO75529 589 aa22.62■■□□□ 1.21
PTPN21-206ENST00000554628 EYA3Q99504 573 aa22.62■■□□□ 1.21
PTPN21-206ENST00000554628 PA2G4Q9UQ80 394 aaKnown RBP22.62■■□□□ 1.21
PTPN21-206ENST00000554628 SUPT16HQ9Y5B9 1047 aaKnown RBP22.62■■□□□ 1.21
PTPN21-206ENST00000554628 RIMBP2O15034 1052 aa22.61■■□□□ 1.21
PTPN21-206ENST00000554628 JDP2Q8WYK2 163 aa22.61■■□□□ 1.21
PTPN21-206ENST00000554628 SIL1Q9H173 461 aa22.61■■□□□ 1.21
PTPN21-206ENST00000554628 CHMP4BQ9H444 224 aaKnown RBP22.61■■□□□ 1.21
PTPN21-206ENST00000554628 EYA2O00167 538 aa22.6■■□□□ 1.21
PTPN21-206ENST00000554628 ATP8B2P98198 1209 aa22.6■■□□□ 1.21
PTPN21-206ENST00000554628 COPRSQ9NQ92 184 aa22.6■■□□□ 1.21
PTPN21-206ENST00000554628 LEMD3Q9Y2U8 911 aa22.6■■□□□ 1.21
PTPN21-206ENST00000554628 MROH5Q6ZUA9 1318 aa22.6■■□□□ 1.21
PTPN21-206ENST00000554628 SNAP23O00161 211 aa22.59■■□□□ 1.21
PTPN21-206ENST00000554628 ZC3H12CQ9C0D7 883 aaKnown RBP22.59■■□□□ 1.21
PTPN21-206ENST00000554628 ZNF804BA4D1E1 1349 aa22.59■■□□□ 1.21
PTPN21-206ENST00000554628 CEP85Q6P2H3 762 aa22.59■■□□□ 1.21
PTPN21-206ENST00000554628 NIM1KQ8IY84 436 aa22.59■■□□□ 1.21
PTPN21-206ENST00000554628 FZD9O00144 591 aa22.58■■□□□ 1.2
PTPN21-206ENST00000554628 KCNJ4P48050 445 aa22.58■■□□□ 1.2
PTPN21-206ENST00000554628 POLA2Q14181 598 aa22.58■■□□□ 1.2
PTPN21-206ENST00000554628 METTL24Q5JXM2 366 aa22.58■■□□□ 1.2
PTPN21-206ENST00000554628 ATG9AQ7Z3C6 839 aa22.58■■□□□ 1.2
PTPN21-206ENST00000554628 FBXO3Q9UK99 471 aa22.58■■□□□ 1.2
PTPN21-206ENST00000554628 MED23Q9ULK4 1368 aa22.57■■□□□ 1.2
PTPN21-206ENST00000554628 CIAO1O76071 339 aa22.57■■□□□ 1.2
PTPN21-206ENST00000554628 SSH3Q8TE77 659 aa22.57■■□□□ 1.2
PTPN21-206ENST00000554628 TXNRD3Q86VQ6 643 aa22.56■■□□□ 1.2
PTPN21-206ENST00000554628 VGLL2Q8N8G2 317 aa22.56■■□□□ 1.2
PTPN21-206ENST00000554628 ZNF526Q8TF50 670 aaPredicted RBP22.56■■□□□ 1.2
PTPN21-206ENST00000554628 DBNDD1Q9H9R9 158 aa22.56■■□□□ 1.2
PTPN21-206ENST00000554628 KLRK1P26718 216 aa22.55■■□□□ 1.2
PTPN21-206ENST00000554628 DOK7Q18PE1 504 aa22.55■■□□□ 1.2
PTPN21-206ENST00000554628 CRBNQ96SW2 442 aa22.55■■□□□ 1.2
PTPN21-206ENST00000554628 ZNF541Q9H0D2 1346 aa22.55■■□□□ 1.2
PTPN21-206ENST00000554628 GLTPD2A6NH11 291 aa22.55■■□□□ 1.2
PTPN21-206ENST00000554628 PDE8BO95263 885 aa22.55■■□□□ 1.2
PTPN21-206ENST00000554628 ZNF784Q8NCA9 323 aaPredicted RBP22.55■■□□□ 1.2
PTPN21-206ENST00000554628 ZNRF3Q9ULT6 936 aa22.55■■□□□ 1.2
PTPN21-206ENST00000554628 SCN9AQ15858 1988 aa22.54■■□□□ 1.2
PTPN21-206ENST00000554628 YDJCA8MPS7 323 aa22.54■■□□□ 1.2
PTPN21-206ENST00000554628 IL15P40933 162 aaPredicted RBP22.54■■□□□ 1.2
PTPN21-206ENST00000554628 UBE4AQ14139 1066 aa22.54■■□□□ 1.2
PTPN21-206ENST00000554628 DPY19L2Q6NUT2 758 aa22.54■■□□□ 1.2
PTPN21-206ENST00000554628 RPAP2Q8IXW5 612 aaPredicted RBP22.54■■□□□ 1.2
PTPN21-206ENST00000554628 IRS2Q9Y4H2 1338 aa22.54■■□□□ 1.2
PTPN21-206ENST00000554628 ECE2O60344 883 aa22.53■■□□□ 1.2
PTPN21-206ENST00000554628 EIF6P56537 245 aaKnown RBP22.53■■□□□ 1.2
PTPN21-206ENST00000554628 G3V3G9 751 aa22.52■■□□□ 1.2
PTPN21-206ENST00000554628 DDNO94850 711 aaPredicted RBP22.52■■□□□ 1.2
PTPN21-206ENST00000554628 DCAF8Q5TAQ9 597 aa22.52■■□□□ 1.2
PTPN21-206ENST00000554628 C15orf52Q6ZUT6 534 aaKnown RBP22.51■■□□□ 1.19
PTPN21-206ENST00000554628 SIRT2Q8IXJ6 389 aa22.51■■□□□ 1.19
PTPN21-206ENST00000554628 CEP126Q9P2H0 1117 aa22.51■■□□□ 1.19
PTPN21-206ENST00000554628 KDM2BQ8NHM5 1336 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms