RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 GPR108Q9NPR9 543 aa17.87■□□□□ 0.45
SHMT2-210ENST00000553950 SEC31BQ9NQW1 1179 aa17.87■□□□□ 0.45
SHMT2-210ENST00000553950 CEP126Q9P2H0 1117 aa17.87■□□□□ 0.45
SHMT2-210ENST00000553950 AKAP2Q9Y2D5 859 aa17.87■□□□□ 0.45
SHMT2-210ENST00000553950 CD2APQ9Y5K6 639 aa17.87■□□□□ 0.45
SHMT2-210ENST00000553950 METTL24Q5JXM2 366 aa17.86■□□□□ 0.45
SHMT2-210ENST00000553950 ZNF594Q96JF6 807 aaPredicted RBP17.86■□□□□ 0.45
SHMT2-210ENST00000553950 APBB1O00213 710 aa17.85■□□□□ 0.45
SHMT2-210ENST00000553950 COL4A1P02462 1669 aa17.85■□□□□ 0.45
SHMT2-210ENST00000553950 PTGER2P43116 358 aa17.85■□□□□ 0.45
SHMT2-210ENST00000553950 LTBP1Q14766 1721 aa17.85■□□□□ 0.45
SHMT2-210ENST00000553950 GPATCH3Q96I76 525 aa17.85■□□□□ 0.45
SHMT2-210ENST00000553950 ANKRD2Q9GZV1 360 aa17.85■□□□□ 0.45
SHMT2-210ENST00000553950 MYH13Q9UKX3 1938 aa17.84■□□□□ 0.45
SHMT2-210ENST00000553950 ARFGEF1Q9Y6D6 1849 aa17.84■□□□□ 0.45
SHMT2-210ENST00000553950 PPEF1O14829 653 aaPredicted RBP17.84■□□□□ 0.45
SHMT2-210ENST00000553950 ATG9AQ7Z3C6 839 aa17.84■□□□□ 0.45
SHMT2-210ENST00000553950 CELF1Q92879 486 aaKnown RBP17.84■□□□□ 0.45
SHMT2-210ENST00000553950 RIPOR2Q9Y4F9 1068 aa17.84■□□□□ 0.45
SHMT2-210ENST00000553950 AK9Q5TCS8 1911 aa17.83■□□□□ 0.44
SHMT2-210ENST00000553950 PUM3Q15397 648 aaKnown RBP17.83■□□□□ 0.44
SHMT2-210ENST00000553950 GRIPAP1Q4V328 841 aa17.83■□□□□ 0.44
SHMT2-210ENST00000553950 LRRC24Q50LG9 513 aa17.83■□□□□ 0.44
SHMT2-210ENST00000553950 LNPKQ9C0E8 428 aa17.83■□□□□ 0.44
SHMT2-210ENST00000553950 SLX4Q8IY92 1834 aa17.83■□□□□ 0.44
SHMT2-210ENST00000553950 AOX1Q06278 1338 aa17.82■□□□□ 0.44
SHMT2-210ENST00000553950 SASH1O94885 1247 aa17.82■□□□□ 0.44
SHMT2-210ENST00000553950 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
SHMT2-210ENST00000553950 TFCP2Q12800 502 aa17.82■□□□□ 0.44
SHMT2-210ENST00000553950 ZNF622Q969S3 477 aaKnown RBP eCLIP17.82■□□□□ 0.44
SHMT2-210ENST00000553950 PUS3Q9BZE2 481 aaKnown RBP17.82■□□□□ 0.44
SHMT2-210ENST00000553950 XDHP47989 1333 aa17.81■□□□□ 0.44
SHMT2-210ENST00000553950 PDE8BO95263 885 aa17.81■□□□□ 0.44
SHMT2-210ENST00000553950 CHRNDQ07001 517 aa17.81■□□□□ 0.44
SHMT2-210ENST00000553950 TNNI3KQ59H18 835 aa17.81■□□□□ 0.44
SHMT2-210ENST00000553950 SOGA3Q5TF21 947 aa17.81■□□□□ 0.44
SHMT2-210ENST00000553950 CC2D2BQ6DHV5 1058 aa17.81■□□□□ 0.44
SHMT2-210ENST00000553950 FPGT-TNNI3KV9GXZ4 949 aa17.81■□□□□ 0.44
SHMT2-210ENST00000553950 SLC5A1P13866 664 aa17.8■□□□□ 0.44
SHMT2-210ENST00000553950 ATP2B3Q16720 1220 aa17.8■□□□□ 0.44
SHMT2-210ENST00000553950 AACSQ86V21 672 aa17.8■□□□□ 0.44
SHMT2-210ENST00000553950 PELP1Q8IZL8 1130 aaKnown RBP17.8■□□□□ 0.44
SHMT2-210ENST00000553950 VGLL2Q8N8G2 317 aa17.8■□□□□ 0.44
SHMT2-210ENST00000553950 LPIN2Q92539 896 aa17.8■□□□□ 0.44
SHMT2-210ENST00000553950 IL1RAPL2Q9NP60 686 aa17.8■□□□□ 0.44
SHMT2-210ENST00000553950 MINPP1Q9UNW1 487 aa17.8■□□□□ 0.44
SHMT2-210ENST00000553950 ATP6V0A2Q9Y487 856 aa17.8■□□□□ 0.44
SHMT2-210ENST00000553950 TTC41PQ6P2S7 1318 aa17.79■□□□□ 0.44
SHMT2-210ENST00000553950 IFIT1P09914 478 aaKnown RBP17.79■□□□□ 0.44
SHMT2-210ENST00000553950 KCNJ4P48050 445 aa17.79■□□□□ 0.44
SHMT2-210ENST00000553950 PRPF40BQ6NWY9 871 aaKnown RBP17.79■□□□□ 0.44
SHMT2-210ENST00000553950 SP8Q8IXZ3 490 aa17.79■□□□□ 0.44
SHMT2-210ENST00000553950 TTLL6Q8N841 843 aa17.79■□□□□ 0.44
SHMT2-210ENST00000553950 PPP1R1BQ9UD71 204 aaPredicted RBP17.79■□□□□ 0.44
SHMT2-210ENST00000553950 DUOX1Q9NRD9 1551 aa17.79■□□□□ 0.44
SHMT2-210ENST00000553950 ERC2O15083 957 aa17.78■□□□□ 0.44
SHMT2-210ENST00000553950 SMARCA5O60264 1052 aaPredicted RBP17.78■□□□□ 0.44
SHMT2-210ENST00000553950 MX1P20591 662 aa17.78■□□□□ 0.44
SHMT2-210ENST00000553950 CHRNA5P30532 468 aa17.78■□□□□ 0.44
SHMT2-210ENST00000553950 UBE4AQ14139 1066 aa17.78■□□□□ 0.44
SHMT2-210ENST00000553950 PIM2Q9P1W9 311 aa17.78■□□□□ 0.44
SHMT2-210ENST00000553950 LEMD3Q9Y2U8 911 aa17.78■□□□□ 0.44
SHMT2-210ENST00000553950 A0A1B0GUL7 405 aa17.77■□□□□ 0.44
SHMT2-210ENST00000553950 ATP2B4P23634 1241 aa17.77■□□□□ 0.44
SHMT2-210ENST00000553950 KLHL34Q8N239 644 aa17.77■□□□□ 0.44
SHMT2-210ENST00000553950 PODXL2Q9NZ53 605 aa17.77■□□□□ 0.44
SHMT2-210ENST00000553950 ANKIB1Q9P2G1 1089 aa17.77■□□□□ 0.44
SHMT2-210ENST00000553950 DPEP1P16444 411 aa17.76■□□□□ 0.43
SHMT2-210ENST00000553950 OSBPL3Q9H4L5 887 aa17.76■□□□□ 0.43
SHMT2-210ENST00000553950 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
SHMT2-210ENST00000553950 SALL3Q9BXA9 1300 aa17.75■□□□□ 0.43
SHMT2-210ENST00000553950 FGFR2P21802 821 aa17.75■□□□□ 0.43
SHMT2-210ENST00000553950 GORABQ5T7V8 394 aa17.75■□□□□ 0.43
SHMT2-210ENST00000553950 EAF2Q96CJ1 260 aaPredicted RBP17.75■□□□□ 0.43
SHMT2-210ENST00000553950 ECHDC1Q9NTX5 307 aa17.75■□□□□ 0.43
SHMT2-210ENST00000553950 STAP2Q9UGK3 403 aa17.75■□□□□ 0.43
SHMT2-210ENST00000553950 GGA1Q9UJY5 639 aa17.75■□□□□ 0.43
SHMT2-210ENST00000553950 ZNF804BA4D1E1 1349 aa17.74■□□□□ 0.43
SHMT2-210ENST00000553950 GLRX3O76003 335 aaKnown RBP17.74■□□□□ 0.43
SHMT2-210ENST00000553950 PDE4AP27815 886 aa17.74■□□□□ 0.43
SHMT2-210ENST00000553950 RGS3P49796 1198 aa17.74■□□□□ 0.43
SHMT2-210ENST00000553950 CCDC93Q567U6 631 aa17.74■□□□□ 0.43
SHMT2-210ENST00000553950 DALRD3Q5D0E6 543 aaKnown RBP17.74■□□□□ 0.43
SHMT2-210ENST00000553950 CCDC158Q5M9N0 1113 aa17.74■□□□□ 0.43
SHMT2-210ENST00000553950 SUPT20HQ8NEM7 779 aa17.74■□□□□ 0.43
SHMT2-210ENST00000553950 NEUROD6Q96NK8 337 aa17.74■□□□□ 0.43
SHMT2-210ENST00000553950 MED23Q9ULK4 1368 aa17.74■□□□□ 0.43
SHMT2-210ENST00000553950 MYH7P12883 1935 aa17.73■□□□□ 0.43
SHMT2-210ENST00000553950 A0A0G2JLW4 131 aa17.73■□□□□ 0.43
SHMT2-210ENST00000553950 PDE1AP54750 535 aa17.73■□□□□ 0.43
SHMT2-210ENST00000553950 CAVIN4Q5BKX8 364 aa17.73■□□□□ 0.43
SHMT2-210ENST00000553950 DPP8Q6V1X1 898 aaPredicted RBP17.73■□□□□ 0.43
SHMT2-210ENST00000553950 PLEKHM2Q8IWE5 1019 aa17.73■□□□□ 0.43
SHMT2-210ENST00000553950 RTKN2Q8IZC4 609 aa17.73■□□□□ 0.43
SHMT2-210ENST00000553950 MPNDQ8N594 471 aa17.73■□□□□ 0.43
SHMT2-210ENST00000553950 EYA3Q99504 573 aa17.73■□□□□ 0.43
SHMT2-210ENST00000553950 DBNLQ9UJU6 430 aaKnown RBP17.73■□□□□ 0.43
SHMT2-210ENST00000553950 TAF5LO75529 589 aa17.72■□□□□ 0.43
SHMT2-210ENST00000553950 UFL1O94874 794 aa17.72■□□□□ 0.43
SHMT2-210ENST00000553950 UQCRFS1P1P0C7P4 283 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms