RNA–Protein interactions for RNA: ENST00000553758.1

AF111169.2-201, humanhuman

TSL 3 BASIC

Gene AF111169.2, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.2-201ENST00000553758 TRMT112Q9UI30 125 aaKnown RBP16.88■□□□□ 0.29
AF111169.2-201ENST00000553758 SH3TC1Q8TE82 1336 aa16.88■□□□□ 0.29
AF111169.2-201ENST00000553758 PPP2R1AP30153 589 aa16.87■□□□□ 0.29
AF111169.2-201ENST00000553758 GPSM2P81274 684 aa16.87■□□□□ 0.29
AF111169.2-201ENST00000553758 FBXO46Q6PJ61 603 aaPredicted RBP16.87■□□□□ 0.29
AF111169.2-201ENST00000553758 SCAF8Q9UPN6 1271 aaKnown RBP16.87■□□□□ 0.29
AF111169.2-201ENST00000553758 PSME4Q14997 1843 aa16.86■□□□□ 0.29
AF111169.2-201ENST00000553758 GPR25O00155 361 aa16.85■□□□□ 0.29
AF111169.2-201ENST00000553758 VIL1P09327 827 aaKnown RBP16.85■□□□□ 0.29
AF111169.2-201ENST00000553758 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
AF111169.2-201ENST00000553758 SCARF1Q14162 830 aa16.85■□□□□ 0.29
AF111169.2-201ENST00000553758 HSP90AB3PQ58FF7 597 aa16.85■□□□□ 0.29
AF111169.2-201ENST00000553758 COPS6Q7L5N1 327 aa16.85■□□□□ 0.29
AF111169.2-201ENST00000553758 FKBP1BP68106 108 aa16.84■□□□□ 0.29
AF111169.2-201ENST00000553758 TCIRG1Q13488 830 aa16.84■□□□□ 0.29
AF111169.2-201ENST00000553758 TBC1D16Q8TBP0 767 aa16.84■□□□□ 0.29
AF111169.2-201ENST00000553758 XAGE3Q8WTP9 111 aa16.84■□□□□ 0.29
AF111169.2-201ENST00000553758 EYA3Q99504 573 aa16.84■□□□□ 0.29
AF111169.2-201ENST00000553758 UBE2Q2LH0YL09 131 aa16.83■□□□□ 0.28
AF111169.2-201ENST00000553758 MKRN3Q13064 507 aaKnown RBP16.83■□□□□ 0.28
AF111169.2-201ENST00000553758 NECTIN2Q92692 538 aa16.83■□□□□ 0.28
AF111169.2-201ENST00000553758 R3HDMLQ9H3Y0 253 aa16.83■□□□□ 0.28
AF111169.2-201ENST00000553758 TSPYL4Q9UJ04 414 aa16.83■□□□□ 0.28
AF111169.2-201ENST00000553758 ZNF280AP59817 542 aaPredicted RBP16.82■□□□□ 0.28
AF111169.2-201ENST00000553758 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
AF111169.2-201ENST00000553758 PRAMEF18Q5VWM3 479 aa16.82■□□□□ 0.28
AF111169.2-201ENST00000553758 RBBP6Q7Z6E9 1792 aaKnown RBP16.82■□□□□ 0.28
AF111169.2-201ENST00000553758 ZNF609O15014 1411 aa16.81■□□□□ 0.28
AF111169.2-201ENST00000553758 SZT2Q5T011 3432 aa16.81■□□□□ 0.28
AF111169.2-201ENST00000553758 POTEFA5A3E0 1075 aa16.81■□□□□ 0.28
AF111169.2-201ENST00000553758 TM4SF4P48230 202 aa16.81■□□□□ 0.28
AF111169.2-201ENST00000553758 NOM1Q5C9Z4 860 aaKnown RBP16.81■□□□□ 0.28
AF111169.2-201ENST00000553758 PLEKHF1Q96S99 279 aa16.81■□□□□ 0.28
AF111169.2-201ENST00000553758 FKTNO75072 461 aa16.8■□□□□ 0.28
AF111169.2-201ENST00000553758 NEFMP07197 916 aa16.8■□□□□ 0.28
AF111169.2-201ENST00000553758 FXR1P51114 621 aaKnown RBP eCLIP16.8■□□□□ 0.28
AF111169.2-201ENST00000553758 SF3B3Q15393 1217 aaKnown RBP16.8■□□□□ 0.28
AF111169.2-201ENST00000553758 RSBN1LQ6PCB5 846 aaPredicted RBP16.8■□□□□ 0.28
AF111169.2-201ENST00000553758 FAM89AQ96GI7 184 aa16.8■□□□□ 0.28
AF111169.2-201ENST00000553758 ZC3H12CQ9C0D7 883 aaKnown RBP16.8■□□□□ 0.28
AF111169.2-201ENST00000553758 MYOZ2Q9NPC6 264 aa16.8■□□□□ 0.28
AF111169.2-201ENST00000553758 PITPNM2Q9BZ72 1349 aa16.79■□□□□ 0.28
AF111169.2-201ENST00000553758 TTLL12Q14166 644 aaPredicted RBP16.79■□□□□ 0.28
AF111169.2-201ENST00000553758 RTL5Q5HYW3 569 aaPredicted RBP16.79■□□□□ 0.28
AF111169.2-201ENST00000553758 AGBL3Q8NEM8 1001 aa16.79■□□□□ 0.28
AF111169.2-201ENST00000553758 G3V3G9 751 aa16.78■□□□□ 0.28
AF111169.2-201ENST00000553758 UFL1O94874 794 aa16.78■□□□□ 0.28
AF111169.2-201ENST00000553758 DCAF8Q5TAQ9 597 aa16.78■□□□□ 0.28
AF111169.2-201ENST00000553758 GMLQ99445 158 aa16.77■□□□□ 0.28
AF111169.2-201ENST00000553758 CFHR5Q9BXR6 569 aa16.77■□□□□ 0.28
AF111169.2-201ENST00000553758 ZNF646O15015 1829 aaPredicted RBP16.77■□□□□ 0.27
AF111169.2-201ENST00000553758 ATP5J2-PTCD1G3V325 749 aa16.76■□□□□ 0.27
AF111169.2-201ENST00000553758 USP17L8P0C7I0 530 aa16.76■□□□□ 0.27
AF111169.2-201ENST00000553758 RPS8P62241 208 aaKnown RBP16.76■□□□□ 0.27
AF111169.2-201ENST00000553758 SREBF2Q12772 1141 aa16.76■□□□□ 0.27
AF111169.2-201ENST00000553758 NBPF9Q3BBW0 867 aa16.76■□□□□ 0.27
AF111169.2-201ENST00000553758 PODXL2Q9NZ53 605 aa16.76■□□□□ 0.27
AF111169.2-201ENST00000553758 TRIM17Q9Y577 477 aa16.76■□□□□ 0.27
AF111169.2-201ENST00000553758 ISCA1Q9BUE6 129 aa16.75■□□□□ 0.27
AF111169.2-201ENST00000553758 SEC31BQ9NQW1 1179 aa16.75■□□□□ 0.27
AF111169.2-201ENST00000553758 ANKIB1Q9P2G1 1089 aa16.75■□□□□ 0.27
AF111169.2-201ENST00000553758 GGA1Q9UJY5 639 aa16.75■□□□□ 0.27
AF111169.2-201ENST00000553758 PTPN12Q05209 780 aaKnown RBP16.74■□□□□ 0.27
AF111169.2-201ENST00000553758 PRKG1Q13976 671 aa16.74■□□□□ 0.27
AF111169.2-201ENST00000553758 KRT24Q2M2I5 525 aa16.74■□□□□ 0.27
AF111169.2-201ENST00000553758 OTOP1Q7RTM1 612 aa16.74■□□□□ 0.27
AF111169.2-201ENST00000553758 KIAA0100Q14667 2235 aaKnown RBP16.74■□□□□ 0.27
AF111169.2-201ENST00000553758 IRS4O14654 1257 aaPredicted RBP16.73■□□□□ 0.27
AF111169.2-201ENST00000553758 CHPF2Q9P2E5 772 aa16.73■□□□□ 0.27
AF111169.2-201ENST00000553758 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
AF111169.2-201ENST00000553758 INTS3Q68E01 1043 aaKnown RBP16.72■□□□□ 0.27
AF111169.2-201ENST00000553758 PLBD2Q8NHP8 589 aa16.72■□□□□ 0.27
AF111169.2-201ENST00000553758 MXD3Q9BW11 206 aa16.72■□□□□ 0.27
AF111169.2-201ENST00000553758 COLQQ9Y215 455 aaPredicted RBP16.72■□□□□ 0.27
AF111169.2-201ENST00000553758 LAMB1P07942 1786 aa16.72■□□□□ 0.27
AF111169.2-201ENST00000553758 USP17L3A6NCW0 530 aa16.71■□□□□ 0.27
AF111169.2-201ENST00000553758 USP17L4A6NCW7 530 aa16.71■□□□□ 0.27
AF111169.2-201ENST00000553758 EN2P19622 333 aaPredicted RBP16.71■□□□□ 0.27
AF111169.2-201ENST00000553758 NF2P35240 595 aa16.71■□□□□ 0.27
AF111169.2-201ENST00000553758 USP17L1Q7RTZ2 530 aa16.71■□□□□ 0.27
AF111169.2-201ENST00000553758 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
AF111169.2-201ENST00000553758 FZD1Q9UP38 647 aa16.71■□□□□ 0.27
AF111169.2-201ENST00000553758 WNT10BO00744 389 aa16.7■□□□□ 0.26
AF111169.2-201ENST00000553758 SPRYD7Q5W111 196 aa16.7■□□□□ 0.26
AF111169.2-201ENST00000553758 ANKRD13DQ6ZTN6 518 aa16.7■□□□□ 0.26
AF111169.2-201ENST00000553758 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
AF111169.2-201ENST00000553758 SPEF2Q9C093 1822 aa16.7■□□□□ 0.26
AF111169.2-201ENST00000553758 WTIPA6NIX2 430 aaPredicted RBP16.69■□□□□ 0.26
AF111169.2-201ENST00000553758 SASH1O94885 1247 aa16.69■□□□□ 0.26
AF111169.2-201ENST00000553758 ALDH1A1P00352 501 aa16.69■□□□□ 0.26
AF111169.2-201ENST00000553758 RIPK4P57078 832 aa16.69■□□□□ 0.26
AF111169.2-201ENST00000553758 ARMC9Q7Z3E5 817 aa16.69■□□□□ 0.26
AF111169.2-201ENST00000553758 CCDC85AQ96PX6 553 aaPredicted RBP16.69■□□□□ 0.26
AF111169.2-201ENST00000553758 BABAM1Q9NWV8 329 aa16.69■□□□□ 0.26
AF111169.2-201ENST00000553758 PTPN22Q9Y2R2 807 aa16.69■□□□□ 0.26
AF111169.2-201ENST00000553758 IGF2BP3O00425 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
AF111169.2-201ENST00000553758 LDLRAD1Q5T700 205 aa16.68■□□□□ 0.26
AF111169.2-201ENST00000553758 PODNQ7Z5L7 613 aa16.68■□□□□ 0.26
AF111169.2-201ENST00000553758 IFNL1Q8IU54 200 aa16.68■□□□□ 0.26
AF111169.2-201ENST00000553758 CD99L2Q8TCZ2 262 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms