RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 CTU1Q7Z7A3 348 aaKnown RBP15.37■□□□□ 0.05
SRP54-203ENST00000553544 ZC3H12CQ9C0D7 883 aaKnown RBP15.37■□□□□ 0.05
SRP54-203ENST00000553544 G3V3G9 751 aa15.36■□□□□ 0.05
SRP54-203ENST00000553544 CHL1O00533 1208 aa15.36■□□□□ 0.05
SRP54-203ENST00000553544 SLC10A3P09131 477 aa15.36■□□□□ 0.05
SRP54-203ENST00000553544 GPSM2P81274 684 aa15.36■□□□□ 0.05
SRP54-203ENST00000553544 KIF4BQ2VIQ3 1234 aa15.36■□□□□ 0.05
SRP54-203ENST00000553544 DCAF8Q5TAQ9 597 aa15.36■□□□□ 0.05
SRP54-203ENST00000553544 CELF1Q92879 486 aaKnown RBP15.36■□□□□ 0.05
SRP54-203ENST00000553544 FAM89AQ96GI7 184 aa15.36■□□□□ 0.05
SRP54-203ENST00000553544 VIL1P09327 827 aaKnown RBP15.35■□□□□ 0.05
SRP54-203ENST00000553544 RPS8P62241 208 aaKnown RBP15.35■□□□□ 0.05
SRP54-203ENST00000553544 CCDC184Q52MB2 194 aa15.35■□□□□ 0.05
SRP54-203ENST00000553544 ANKRD13DQ6ZTN6 518 aa15.35■□□□□ 0.05
SRP54-203ENST00000553544 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
SRP54-203ENST00000553544 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
SRP54-203ENST00000553544 PRPF38BQ5VTL8 546 aaKnown RBP15.34■□□□□ 0.05
SRP54-203ENST00000553544 PLBD2Q8NHP8 589 aa15.34■□□□□ 0.05
SRP54-203ENST00000553544 TBC1D16Q8TBP0 767 aa15.34■□□□□ 0.05
SRP54-203ENST00000553544 FKBP1BP68106 108 aa15.33■□□□□ 0.04
SRP54-203ENST00000553544 SCARF1Q14162 830 aa15.33■□□□□ 0.04
SRP54-203ENST00000553544 CDCA5Q96FF9 252 aa15.33■□□□□ 0.04
SRP54-203ENST00000553544 GGA3Q9NZ52 723 aa15.33■□□□□ 0.04
SRP54-203ENST00000553544 ANKRD36CQ5JPF3 1778 aa15.33■□□□□ 0.04
SRP54-203ENST00000553544 RTL9Q8NET4 1388 aa15.33■□□□□ 0.04
SRP54-203ENST00000553544 APAF1O14727 1248 aa15.32■□□□□ 0.04
SRP54-203ENST00000553544 ISCA1Q9BUE6 129 aa15.32■□□□□ 0.04
SRP54-203ENST00000553544 HDAC9Q9UKV0 1011 aa15.32■□□□□ 0.04
SRP54-203ENST00000553544 ATP5J2-PTCD1G3V325 749 aa15.31■□□□□ 0.04
SRP54-203ENST00000553544 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
SRP54-203ENST00000553544 HSP90B1P14625 803 aaKnown RBP15.31■□□□□ 0.04
SRP54-203ENST00000553544 ZNF280AP59817 542 aaPredicted RBP15.31■□□□□ 0.04
SRP54-203ENST00000553544 RTL5Q5HYW3 569 aaPredicted RBP15.31■□□□□ 0.04
SRP54-203ENST00000553544 ANGEL2Q5VTE6 544 aaKnown RBP15.31■□□□□ 0.04
SRP54-203ENST00000553544 AGBL3Q8NEM8 1001 aa15.31■□□□□ 0.04
SRP54-203ENST00000553544 PODXL2Q9NZ53 605 aa15.31■□□□□ 0.04
SRP54-203ENST00000553544 CHPF2Q9P2E5 772 aa15.31■□□□□ 0.04
SRP54-203ENST00000553544 ANKIB1Q9P2G1 1089 aa15.31■□□□□ 0.04
SRP54-203ENST00000553544 HPS5Q9UPZ3 1129 aa15.31■□□□□ 0.04
SRP54-203ENST00000553544 POLR2AP24928 1970 aaKnown RBP15.31■□□□□ 0.04
SRP54-203ENST00000553544 ASTN2O75129 1339 aaPredicted RBP15.3■□□□□ 0.04
SRP54-203ENST00000553544 TRIM28Q13263 835 aaKnown RBP15.3■□□□□ 0.04
SRP54-203ENST00000553544 KRT24Q2M2I5 525 aa15.3■□□□□ 0.04
SRP54-203ENST00000553544 RSBN1LQ6PCB5 846 aaPredicted RBP15.3■□□□□ 0.04
SRP54-203ENST00000553544 RASAL3Q86YV0 1011 aa15.3■□□□□ 0.04
SRP54-203ENST00000553544 DBF4Q9UBU7 674 aaPredicted RBP15.3■□□□□ 0.04
SRP54-203ENST00000553544 USP17L8P0C7I0 530 aa15.29■□□□□ 0.04
SRP54-203ENST00000553544 ZNF853P0CG23 659 aa15.29■□□□□ 0.04
SRP54-203ENST00000553544 HDGFL1Q5TGJ6 251 aa15.29■□□□□ 0.04
SRP54-203ENST00000553544 HYPKQ9NX55 129 aa15.29■□□□□ 0.04
SRP54-203ENST00000553544 GGA1Q9UJY5 639 aa15.29■□□□□ 0.04
SRP54-203ENST00000553544 LAS1LQ9Y4W2 734 aaKnown RBP15.29■□□□□ 0.04
SRP54-203ENST00000553544 DUOX1Q9NRD9 1551 aa15.28■□□□□ 0.04
SRP54-203ENST00000553544 UFL1O94874 794 aa15.28■□□□□ 0.04
SRP54-203ENST00000553544 TBC1D8O95759 1140 aa15.28■□□□□ 0.04
SRP54-203ENST00000553544 MYOZ2Q9NPC6 264 aa15.28■□□□□ 0.04
SRP54-203ENST00000553544 UBE2Q2LH0YL09 131 aa15.27■□□□□ 0.04
SRP54-203ENST00000553544 ANP32CO43423 234 aa15.27■□□□□ 0.04
SRP54-203ENST00000553544 HOXB7P09629 217 aa15.27■□□□□ 0.04
SRP54-203ENST00000553544 TM4SF4P48230 202 aa15.27■□□□□ 0.04
SRP54-203ENST00000553544 ZBTB38Q8NAP3 1195 aaPredicted RBP15.27■□□□□ 0.04
SRP54-203ENST00000553544 ZNF296Q8WUU4 475 aaPredicted RBP15.27■□□□□ 0.04
SRP54-203ENST00000553544 MBIPQ9NS73 344 aa15.27■□□□□ 0.04
SRP54-203ENST00000553544 TAF1P21675 1872 aa15.27■□□□□ 0.03
SRP54-203ENST00000553544 PITPNM2Q9BZ72 1349 aa15.26■□□□□ 0.03
SRP54-203ENST00000553544 USP17L3A6NCW0 530 aa15.26■□□□□ 0.03
SRP54-203ENST00000553544 USP17L4A6NCW7 530 aa15.26■□□□□ 0.03
SRP54-203ENST00000553544 USP17L1Q7RTZ2 530 aa15.26■□□□□ 0.03
SRP54-203ENST00000553544 RIC3Q7Z5B4 369 aa15.26■□□□□ 0.03
SRP54-203ENST00000553544 PODNQ7Z5L7 613 aa15.26■□□□□ 0.03
SRP54-203ENST00000553544 GMLQ99445 158 aa15.26■□□□□ 0.03
SRP54-203ENST00000553544 SEC31BQ9NQW1 1179 aa15.26■□□□□ 0.03
SRP54-203ENST00000553544 IFT57Q9NWB7 429 aa15.26■□□□□ 0.03
SRP54-203ENST00000553544 LAMB2P55268 1798 aa15.26■□□□□ 0.03
SRP54-203ENST00000553544 AKAP11Q9UKA4 1901 aa15.25■□□□□ 0.03
SRP54-203ENST00000553544 GPR25O00155 361 aa15.25■□□□□ 0.03
SRP54-203ENST00000553544 TTLL12Q14166 644 aaPredicted RBP15.25■□□□□ 0.03
SRP54-203ENST00000553544 CCDC152Q4G0S7 254 aa15.25■□□□□ 0.03
SRP54-203ENST00000553544 NOM1Q5C9Z4 860 aaKnown RBP15.25■□□□□ 0.03
SRP54-203ENST00000553544 MOB2Q70IA6 237 aa15.25■□□□□ 0.03
SRP54-203ENST00000553544 NF2P35240 595 aa15.24■□□□□ 0.03
SRP54-203ENST00000553544 GNAI1P63096 354 aa15.24■□□□□ 0.03
SRP54-203ENST00000553544 CALD1Q05682 793 aaKnown RBP15.24■□□□□ 0.03
SRP54-203ENST00000553544 PRAMEF18Q5VWM3 479 aa15.24■□□□□ 0.03
SRP54-203ENST00000553544 FBXO46Q6PJ61 603 aaPredicted RBP15.24■□□□□ 0.03
SRP54-203ENST00000553544 OGFOD1Q8N543 542 aa15.24■□□□□ 0.03
SRP54-203ENST00000553544 MRS2Q9HD23 443 aa15.24■□□□□ 0.03
SRP54-203ENST00000553544 PDE8AO60658 829 aa15.23■□□□□ 0.03
SRP54-203ENST00000553544 ATP2B4P23634 1241 aa15.23■□□□□ 0.03
SRP54-203ENST00000553544 CCDC27Q2M243 656 aa15.23■□□□□ 0.03
SRP54-203ENST00000553544 NCBP3Q53F19 620 aaKnown RBP15.23■□□□□ 0.03
SRP54-203ENST00000553544 DUSP27Q5VZP5 1158 aa15.23■□□□□ 0.03
SRP54-203ENST00000553544 GCC1Q96CN9 775 aa15.23■□□□□ 0.03
SRP54-203ENST00000553544 SCAF8Q9UPN6 1271 aaKnown RBP15.23■□□□□ 0.03
SRP54-203ENST00000553544 LRRC37AA6NMS7 1700 aa15.23■□□□□ 0.03
SRP54-203ENST00000553544 XDHP47989 1333 aa15.22■□□□□ 0.03
SRP54-203ENST00000553544 GOLGA2Q08379 1002 aa15.22■□□□□ 0.03
SRP54-203ENST00000553544 SREBF2Q12772 1141 aa15.22■□□□□ 0.03
SRP54-203ENST00000553544 NBPF9Q3BBW0 867 aa15.22■□□□□ 0.03
SRP54-203ENST00000553544 ANKRD18AQ8IVF6 992 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms