RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 EYA3Q99504 573 aa29.85■■■□□ 2.37
TDP1-205ENST00000553527 DBNDD1Q9H9R9 158 aa29.85■■■□□ 2.37
TDP1-205ENST00000553527 IGHMBP2P38935 993 aaKnown RBP29.84■■■□□ 2.37
TDP1-205ENST00000553527 FOXO4P98177 505 aa29.84■■■□□ 2.37
TDP1-205ENST00000553527 DOK7Q18PE1 504 aa29.84■■■□□ 2.37
TDP1-205ENST00000553527 ZC3H12CQ9C0D7 883 aaKnown RBP29.84■■■□□ 2.37
TDP1-205ENST00000553527 GGA1Q9UJY5 639 aa29.84■■■□□ 2.37
TDP1-205ENST00000553527 LTBP1Q14766 1721 aa29.83■■■□□ 2.37
TDP1-205ENST00000553527 RTL9Q8NET4 1388 aa29.83■■■□□ 2.37
TDP1-205ENST00000553527 CT47B1P0C2W7 299 aaPredicted RBP29.83■■■□□ 2.37
TDP1-205ENST00000553527 EPHX2P34913 555 aa29.83■■■□□ 2.37
TDP1-205ENST00000553527 BSDC1Q9NW68 430 aaPredicted RBP29.83■■■□□ 2.37
TDP1-205ENST00000553527 PODXL2Q9NZ53 605 aa29.83■■■□□ 2.37
TDP1-205ENST00000553527 G3V3G9 751 aa29.82■■■□□ 2.36
TDP1-205ENST00000553527 LMOD1P29536 600 aaPredicted RBP29.82■■■□□ 2.36
TDP1-205ENST00000553527 EPHA10Q5JZY3 1008 aa29.82■■■□□ 2.36
TDP1-205ENST00000553527 DCAF8Q5TAQ9 597 aa29.82■■■□□ 2.36
TDP1-205ENST00000553527 CIAPIN1Q6FI81 312 aa29.82■■■□□ 2.36
TDP1-205ENST00000553527 MPHOSPH8Q99549 860 aa29.82■■■□□ 2.36
TDP1-205ENST00000553527 MINPP1Q9UNW1 487 aa29.82■■■□□ 2.36
TDP1-205ENST00000553527 CLEC11AQ9Y240 323 aa29.82■■■□□ 2.36
TDP1-205ENST00000553527 ANKRD18BA2A2Z9 1011 aa29.81■■■□□ 2.36
TDP1-205ENST00000553527 YDJCA8MPS7 323 aa29.81■■■□□ 2.36
TDP1-205ENST00000553527 LMBR1LQ6UX01 489 aa29.81■■■□□ 2.36
TDP1-205ENST00000553527 NOB1Q9ULX3 412 aaKnown RBP29.81■■■□□ 2.36
TDP1-205ENST00000553527 XDHP47989 1333 aa29.8■■■□□ 2.36
TDP1-205ENST00000553527 NBPF7P0C2Y1 421 aaPredicted RBP29.8■■■□□ 2.36
TDP1-205ENST00000553527 CEP350Q5VT06 3117 aa29.79■■■□□ 2.36
TDP1-205ENST00000553527 WTIPA6NIX2 430 aaPredicted RBP29.79■■■□□ 2.36
TDP1-205ENST00000553527 EPS15P42566 896 aa29.79■■■□□ 2.36
TDP1-205ENST00000553527 SCNN1DP51172 638 aa29.79■■■□□ 2.36
TDP1-205ENST00000553527 IFIT5Q13325 482 aaKnown RBP29.79■■■□□ 2.36
TDP1-205ENST00000553527 CHADLQ6NUI6 762 aa29.79■■■□□ 2.36
TDP1-205ENST00000553527 ATP2B4P23634 1241 aa29.78■■■□□ 2.36
TDP1-205ENST00000553527 APLP1P51693 650 aa29.78■■■□□ 2.36
TDP1-205ENST00000553527 TNIP1Q15025 636 aa29.78■■■□□ 2.36
TDP1-205ENST00000553527 SUCLG2Q96I99 432 aa29.78■■■□□ 2.36
TDP1-205ENST00000553527 ECE2O60344 883 aa29.77■■■□□ 2.36
TDP1-205ENST00000553527 RARSP54136 660 aaKnown RBP29.77■■■□□ 2.36
TDP1-205ENST00000553527 HTRA3P83110 453 aa29.77■■■□□ 2.36
TDP1-205ENST00000553527 KCNQ5Q9NR82 932 aa29.77■■■□□ 2.36
TDP1-205ENST00000553527 GMPSP49915 693 aaPredicted RBP29.76■■■□□ 2.35
TDP1-205ENST00000553527 CCDC57Q2TAC2 916 aa29.76■■■□□ 2.35
TDP1-205ENST00000553527 LDHDQ86WU2 507 aa29.76■■■□□ 2.35
TDP1-205ENST00000553527 TAF7LQ5H9L4 462 aa29.75■■■□□ 2.35
TDP1-205ENST00000553527 PNMA8AQ86V59 439 aaPredicted RBP29.75■■■□□ 2.35
TDP1-205ENST00000553527 ZNF594Q96JF6 807 aaPredicted RBP29.75■■■□□ 2.35
TDP1-205ENST00000553527 CCT4P50991 539 aaKnown RBP29.74■■■□□ 2.35
TDP1-205ENST00000553527 ZBTB12Q9Y330 459 aaPredicted RBP29.74■■■□□ 2.35
TDP1-205ENST00000553527 PSMD14O00487 310 aa29.73■■■□□ 2.35
TDP1-205ENST00000553527 KAZALD1Q96I82 304 aa29.73■■■□□ 2.35
TDP1-205ENST00000553527 GPRC5DQ9NZD1 345 aa29.73■■■□□ 2.35
TDP1-205ENST00000553527 SCN9AQ15858 1988 aa29.72■■■□□ 2.35
TDP1-205ENST00000553527 UTYO14607 1347 aa29.71■■■□□ 2.35
TDP1-205ENST00000553527 CHRNDQ07001 517 aa29.71■■■□□ 2.35
TDP1-205ENST00000553527 HELBQ8NG08 1087 aaPredicted RBP29.71■■■□□ 2.35
TDP1-205ENST00000553527 ANKRD2Q9GZV1 360 aa29.71■■■□□ 2.35
TDP1-205ENST00000553527 USP44Q9H0E7 712 aa29.71■■■□□ 2.35
TDP1-205ENST00000553527 BICC1Q9H694 974 aaKnown RBP29.71■■■□□ 2.35
TDP1-205ENST00000553527 KCNJ4P48050 445 aa29.7■■■□□ 2.35
TDP1-205ENST00000553527 MAP1SQ66K74 1059 aaPredicted RBP29.7■■■□□ 2.35
TDP1-205ENST00000553527 API5Q9BZZ5 524 aaKnown RBP29.7■■■□□ 2.35
TDP1-205ENST00000553527 PLIN1O60240 522 aa29.69■■■□□ 2.34
TDP1-205ENST00000553527 TAF5LO75529 589 aa29.69■■■□□ 2.34
TDP1-205ENST00000553527 LDHAL6AQ6ZMR3 332 aa29.69■■■□□ 2.34
TDP1-205ENST00000553527 CNOT7Q9UIV1 285 aaKnown RBP29.69■■■□□ 2.34
TDP1-205ENST00000553527 LEMD3Q9Y2U8 911 aa29.69■■■□□ 2.34
TDP1-205ENST00000553527 SHTN1A0MZ66 631 aa29.68■■■□□ 2.34
TDP1-205ENST00000553527 BCAR3O75815 825 aa29.68■■■□□ 2.34
TDP1-205ENST00000553527 BRPF1P55201 1214 aaPredicted RBP29.68■■■□□ 2.34
TDP1-205ENST00000553527 FRAT1Q92837 279 aaPredicted RBP29.68■■■□□ 2.34
TDP1-205ENST00000553527 CNNM1Q9NRU3 951 aa29.68■■■□□ 2.34
TDP1-205ENST00000553527 ADARB2Q9NS39 739 aaKnown RBP29.68■■■□□ 2.34
TDP1-205ENST00000553527 ZNF804BA4D1E1 1349 aa29.68■■■□□ 2.34
TDP1-205ENST00000553527 USP50Q70EL3 339 aaPredicted RBP29.67■■■□□ 2.34
TDP1-205ENST00000553527 SNAP23O00161 211 aa29.66■■■□□ 2.34
TDP1-205ENST00000553527 TXNRD3Q86VQ6 643 aa29.66■■■□□ 2.34
TDP1-205ENST00000553527 CNTROBQ8N137 903 aa29.66■■■□□ 2.34
TDP1-205ENST00000553527 ADAMTSL1Q8N6G6 1762 aa29.65■■■□□ 2.34
TDP1-205ENST00000553527 H7C1D1 291 aa29.65■■■□□ 2.34
TDP1-205ENST00000553527 MICALL2Q8IY33 904 aa29.65■■■□□ 2.34
TDP1-205ENST00000553527 KIF16BQ96L93 1317 aa29.65■■■□□ 2.34
TDP1-205ENST00000553527 MED23Q9ULK4 1368 aa29.64■■■□□ 2.34
TDP1-205ENST00000553527 KLRK1P26718 216 aa29.64■■■□□ 2.34
TDP1-205ENST00000553527 ANKRD44Q8N8A2 993 aa29.63■■■□□ 2.33
TDP1-205ENST00000553527 FBXW7Q969H0 707 aa29.63■■■□□ 2.33
TDP1-205ENST00000553527 PUS3Q9BZE2 481 aaKnown RBP29.63■■■□□ 2.33
TDP1-205ENST00000553527 A0A1B0GUL6 1792 aa29.62■■■□□ 2.33
TDP1-205ENST00000553527 ITGBL1O95965 494 aaPredicted RBP29.62■■■□□ 2.33
TDP1-205ENST00000553527 VIL1P09327 827 aaKnown RBP29.62■■■□□ 2.33
TDP1-205ENST00000553527 RABL6Q3YEC7 729 aaPredicted RBP29.62■■■□□ 2.33
TDP1-205ENST00000553527 RBM26Q5T8P6 1007 aaKnown RBP29.62■■■□□ 2.33
TDP1-205ENST00000553527 PODNQ7Z5L7 613 aa29.62■■■□□ 2.33
TDP1-205ENST00000553527 IPO8O15397 1037 aaKnown RBP29.61■■■□□ 2.33
TDP1-205ENST00000553527 ARHGAP45Q92619 1136 aa29.61■■■□□ 2.33
TDP1-205ENST00000553527 DPF2Q92785 391 aa29.61■■■□□ 2.33
TDP1-205ENST00000553527 PSME4Q14997 1843 aa29.6■■■□□ 2.33
TDP1-205ENST00000553527 UBTFL1P0CB47 393 aaPredicted RBP29.6■■■□□ 2.33
TDP1-205ENST00000553527 SAMD7Q7Z3H4 446 aa29.6■■■□□ 2.33
TDP1-205ENST00000553527 DNAJC5GQ8N7S2 189 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms