RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 UFL1O94874 794 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 POTEIP0CG38 1075 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 POTEJP0CG39 1038 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 ITGA6P23229 1130 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 POLA2Q14181 598 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 WASHC4Q2M389 1173 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 TBC1D16Q8TBP0 767 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 VPS33BQ9H267 617 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 DBNDD1Q9H9R9 158 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 C9orf78Q9NZ63 289 aaPredicted RBP12.93□□□□□ -0.34
LINC00517-201ENST00000553396 ZNRF3Q9ULT6 936 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 CHMP3Q9Y3E7 222 aa12.93□□□□□ -0.34
LINC00517-201ENST00000553396 ALDH1L1O75891 902 aa12.92□□□□□ -0.34
LINC00517-201ENST00000553396 FSTL1Q12841 308 aa12.92□□□□□ -0.34
LINC00517-201ENST00000553396 EAPPQ56P03 285 aaPredicted RBP12.92□□□□□ -0.34
LINC00517-201ENST00000553396 TAF1DQ9H5J8 278 aaPredicted RBP12.92□□□□□ -0.34
LINC00517-201ENST00000553396 HACL1Q9UJ83 578 aa12.92□□□□□ -0.34
LINC00517-201ENST00000553396 GGA1Q9UJY5 639 aa12.92□□□□□ -0.34
LINC00517-201ENST00000553396 XDHP47989 1333 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 SCN9AQ15858 1988 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 YDJCA8MPS7 323 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 RAD17O75943 681 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 CT47B1P0C2W7 299 aaPredicted RBP12.91□□□□□ -0.34
LINC00517-201ENST00000553396 EPHX2P34913 555 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 IGHMBP2P38935 993 aaKnown RBP12.91□□□□□ -0.34
LINC00517-201ENST00000553396 FOXO4P98177 505 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 CXCL9Q07325 125 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 EPHA10Q5JZY3 1008 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 EYA3Q99504 573 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 PODXL2Q9NZ53 605 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 A0A1B0GUL6 1792 aa12.91□□□□□ -0.34
LINC00517-201ENST00000553396 ADAMTSL1Q8N6G6 1762 aa12.9□□□□□ -0.34
LINC00517-201ENST00000553396 CSF1RP07333 972 aa12.9□□□□□ -0.34
LINC00517-201ENST00000553396 NBPF7P0C2Y1 421 aaPredicted RBP12.9□□□□□ -0.34
LINC00517-201ENST00000553396 LMOD1P29536 600 aaPredicted RBP12.9□□□□□ -0.34
LINC00517-201ENST00000553396 SCNN1DP51172 638 aa12.9□□□□□ -0.34
LINC00517-201ENST00000553396 CIAPIN1Q6FI81 312 aa12.9□□□□□ -0.34
LINC00517-201ENST00000553396 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
LINC00517-201ENST00000553396 MPHOSPH8Q99549 860 aa12.9□□□□□ -0.34
LINC00517-201ENST00000553396 BSDC1Q9NW68 430 aaPredicted RBP12.9□□□□□ -0.34
LINC00517-201ENST00000553396 ANKRD18BA2A2Z9 1011 aa12.89□□□□□ -0.35
LINC00517-201ENST00000553396 WTIPA6NIX2 430 aaPredicted RBP12.89□□□□□ -0.35
LINC00517-201ENST00000553396 ECE2O60344 883 aa12.89□□□□□ -0.35
LINC00517-201ENST00000553396 EPS15P42566 896 aa12.89□□□□□ -0.35
LINC00517-201ENST00000553396 SUCLG2Q96I99 432 aa12.89□□□□□ -0.35
LINC00517-201ENST00000553396 ZC3H12CQ9C0D7 883 aaKnown RBP12.89□□□□□ -0.35
LINC00517-201ENST00000553396 NOB1Q9ULX3 412 aaKnown RBP12.89□□□□□ -0.35
LINC00517-201ENST00000553396 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
LINC00517-201ENST00000553396 CLEC11AQ9Y240 323 aa12.89□□□□□ -0.35
LINC00517-201ENST00000553396 G3V3G9 751 aa12.88□□□□□ -0.35
LINC00517-201ENST00000553396 ATP2B4P23634 1241 aa12.88□□□□□ -0.35
LINC00517-201ENST00000553396 GMPSP49915 693 aaPredicted RBP12.88□□□□□ -0.35
LINC00517-201ENST00000553396 APLP1P51693 650 aa12.88□□□□□ -0.35
LINC00517-201ENST00000553396 RARSP54136 660 aaKnown RBP12.88□□□□□ -0.35
LINC00517-201ENST00000553396 HTRA3P83110 453 aa12.88□□□□□ -0.35
LINC00517-201ENST00000553396 IFIT5Q13325 482 aaKnown RBP12.88□□□□□ -0.35
LINC00517-201ENST00000553396 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
LINC00517-201ENST00000553396 CHADLQ6NUI6 762 aa12.88□□□□□ -0.35
LINC00517-201ENST00000553396 LDHDQ86WU2 507 aa12.88□□□□□ -0.35
LINC00517-201ENST00000553396 PSME4Q14997 1843 aa12.88□□□□□ -0.35
LINC00517-201ENST00000553396 PSMD14O00487 310 aa12.87□□□□□ -0.35
LINC00517-201ENST00000553396 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
LINC00517-201ENST00000553396 TNIP1Q15025 636 aa12.87□□□□□ -0.35
LINC00517-201ENST00000553396 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
LINC00517-201ENST00000553396 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
LINC00517-201ENST00000553396 PNMA8AQ86V59 439 aaPredicted RBP12.87□□□□□ -0.35
LINC00517-201ENST00000553396 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
LINC00517-201ENST00000553396 ZNF594Q96JF6 807 aaPredicted RBP12.87□□□□□ -0.35
LINC00517-201ENST00000553396 KCNQ5Q9NR82 932 aa12.87□□□□□ -0.35
LINC00517-201ENST00000553396 GPRC5DQ9NZD1 345 aa12.87□□□□□ -0.35
LINC00517-201ENST00000553396 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
LINC00517-201ENST00000553396 UTYO14607 1347 aa12.87□□□□□ -0.35
LINC00517-201ENST00000553396 MED23Q9ULK4 1368 aa12.86□□□□□ -0.35
LINC00517-201ENST00000553396 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
LINC00517-201ENST00000553396 CHRNDQ07001 517 aa12.86□□□□□ -0.35
LINC00517-201ENST00000553396 CCDC57Q2TAC2 916 aa12.86□□□□□ -0.35
LINC00517-201ENST00000553396 BICC1Q9H694 974 aaKnown RBP12.86□□□□□ -0.35
LINC00517-201ENST00000553396 ZBED9Q6R2W3 1325 aa12.86□□□□□ -0.35
LINC00517-201ENST00000553396 KIF16BQ96L93 1317 aa12.86□□□□□ -0.35
LINC00517-201ENST00000553396 SHTN1A0MZ66 631 aa12.85□□□□□ -0.35
LINC00517-201ENST00000553396 KLRK1P26718 216 aa12.85□□□□□ -0.35
LINC00517-201ENST00000553396 KCNJ4P48050 445 aa12.85□□□□□ -0.35
LINC00517-201ENST00000553396 MAP1SQ66K74 1059 aaPredicted RBP12.85□□□□□ -0.35
LINC00517-201ENST00000553396 HELBQ8NG08 1087 aaPredicted RBP12.85□□□□□ -0.35
LINC00517-201ENST00000553396 API5Q9BZZ5 524 aaKnown RBP12.85□□□□□ -0.35
LINC00517-201ENST00000553396 ANKRD2Q9GZV1 360 aa12.85□□□□□ -0.35
LINC00517-201ENST00000553396 USP44Q9H0E7 712 aa12.85□□□□□ -0.35
LINC00517-201ENST00000553396 ZNF804BA4D1E1 1349 aa12.85□□□□□ -0.35
LINC00517-201ENST00000553396 TAF5LO75529 589 aa12.84□□□□□ -0.35
LINC00517-201ENST00000553396 BCAR3O75815 825 aa12.84□□□□□ -0.35
LINC00517-201ENST00000553396 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
LINC00517-201ENST00000553396 TXNRD3Q86VQ6 643 aa12.84□□□□□ -0.35
LINC00517-201ENST00000553396 MICALL2Q8IY33 904 aa12.84□□□□□ -0.35
LINC00517-201ENST00000553396 ANKRD44Q8N8A2 993 aa12.84□□□□□ -0.35
LINC00517-201ENST00000553396 FRAT1Q92837 279 aaPredicted RBP12.84□□□□□ -0.35
LINC00517-201ENST00000553396 CNNM1Q9NRU3 951 aa12.84□□□□□ -0.35
LINC00517-201ENST00000553396 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.35
LINC00517-201ENST00000553396 SNAP23O00161 211 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms