RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 JARID2Q92833 1246 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-208ENST00000552890 CLUAP1Q96AJ1 413 aa12.79□□□□□ -0.36
TRAFD1-208ENST00000552890 SUCLG2Q96I99 432 aa12.79□□□□□ -0.36
TRAFD1-208ENST00000552890 SEC31BQ9NQW1 1179 aa12.79□□□□□ -0.36
TRAFD1-208ENST00000552890 MINPP1Q9UNW1 487 aa12.79□□□□□ -0.36
TRAFD1-208ENST00000552890 GOLGB1Q14789 3259 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-208ENST00000552890 GLTPD2A6NH11 291 aa12.78□□□□□ -0.36
TRAFD1-208ENST00000552890 HMMRO75330 724 aa12.78□□□□□ -0.36
TRAFD1-208ENST00000552890 MTX1Q13505 466 aa12.78□□□□□ -0.36
TRAFD1-208ENST00000552890 GPBP1L1Q9HC44 474 aaPredicted RBP12.78□□□□□ -0.36
TRAFD1-208ENST00000552890 ZNRF3Q9ULT6 936 aa12.78□□□□□ -0.36
TRAFD1-208ENST00000552890 CIAO1O76071 339 aa12.77□□□□□ -0.37
TRAFD1-208ENST00000552890 UFL1O94874 794 aa12.77□□□□□ -0.37
TRAFD1-208ENST00000552890 UBE4AQ14139 1066 aa12.77□□□□□ -0.37
TRAFD1-208ENST00000552890 MVPQ14764 893 aaKnown RBP12.77□□□□□ -0.37
TRAFD1-208ENST00000552890 HSP90AB4PQ58FF6 505 aa12.77□□□□□ -0.37
TRAFD1-208ENST00000552890 PODNQ7Z5L7 613 aa12.77□□□□□ -0.37
TRAFD1-208ENST00000552890 TMEM57Q8N5G2 664 aa12.77□□□□□ -0.37
TRAFD1-208ENST00000552890 CCDC85AQ96PX6 553 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-208ENST00000552890 ZNF277Q9NRM2 450 aaPredicted RBP12.77□□□□□ -0.37
TRAFD1-208ENST00000552890 FZD9O00144 591 aa12.76□□□□□ -0.37
TRAFD1-208ENST00000552890 IL15P40933 162 aaPredicted RBP12.76□□□□□ -0.37
TRAFD1-208ENST00000552890 RASSF7Q02833 373 aa12.76□□□□□ -0.37
TRAFD1-208ENST00000552890 C16orf71Q8IYS4 520 aaPredicted RBP12.76□□□□□ -0.37
TRAFD1-208ENST00000552890 GPC2Q8N158 579 aa12.76□□□□□ -0.37
TRAFD1-208ENST00000552890 TBC1D16Q8TBP0 767 aa12.76□□□□□ -0.37
TRAFD1-208ENST00000552890 MEIS3Q99687 375 aa12.76□□□□□ -0.37
TRAFD1-208ENST00000552890 LRRFIP2Q9Y608 721 aaKnown RBP12.76□□□□□ -0.37
TRAFD1-208ENST00000552890 UTRNP46939 3433 aa12.76□□□□□ -0.37
TRAFD1-208ENST00000552890 CACNA1SQ13698 1873 aa12.76□□□□□ -0.37
TRAFD1-208ENST00000552890 ZNF804BA4D1E1 1349 aa12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 LRRC37AA6NMS7 1700 aa12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 SRGAP3O43295 1099 aa12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 VEGFAP15692 232 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 LMOD1P29536 600 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 GPSM2P81274 684 aa12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 C15orf52Q6ZUT6 534 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 ZNF804AQ7Z570 1209 aa12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 RPAP2Q8IXW5 612 aaPredicted RBP12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 COA1Q9GZY4 146 aa12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 COPRSQ9NQ92 184 aa12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 CEP126Q9P2H0 1117 aa12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 MED23Q9ULK4 1368 aa12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 AKAP2Q9Y2D5 859 aa12.75□□□□□ -0.37
TRAFD1-208ENST00000552890 DICER1Q9UPY3 1922 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 SBF1O95248 1867 aa12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 SNED1Q8TER0 1413 aa12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 EYA2O00167 538 aa12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 ZBTB7BO15156 539 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 IFIT1P09914 478 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 RPS12P25398 132 aaKnown RBP12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 CHRNDQ07001 517 aa12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 G3BP1Q13283 466 aaKnown RBP eCLIP12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 CAVIN4Q5BKX8 364 aa12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 METTL24Q5JXM2 366 aa12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 ERC1Q8IUD2 1116 aa12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 ZNF784Q8NCA9 323 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 KAZALD1Q96I82 304 aa12.74□□□□□ -0.37
TRAFD1-208ENST00000552890 MYO3BQ8WXR4 1341 aa12.73□□□□□ -0.37
TRAFD1-208ENST00000552890 PUM3Q15397 648 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-208ENST00000552890 AOC3Q16853 763 aa12.73□□□□□ -0.37
TRAFD1-208ENST00000552890 EPHA10Q5JZY3 1008 aa12.73□□□□□ -0.37
TRAFD1-208ENST00000552890 CIAPIN1Q6FI81 312 aa12.73□□□□□ -0.37
TRAFD1-208ENST00000552890 PNMA8AQ86V59 439 aaPredicted RBP12.73□□□□□ -0.37
TRAFD1-208ENST00000552890 VPS37DQ86XT2 251 aa12.73□□□□□ -0.37
TRAFD1-208ENST00000552890 L3MBTL3Q96JM7 780 aaPredicted RBP12.73□□□□□ -0.37
TRAFD1-208ENST00000552890 POLLQ9UGP5 575 aa12.73□□□□□ -0.37
TRAFD1-208ENST00000552890 RIPOR2Q9Y4F9 1068 aa12.73□□□□□ -0.37
TRAFD1-208ENST00000552890 PDE8BO95263 885 aa12.72□□□□□ -0.37
TRAFD1-208ENST00000552890 ATP8B2P98198 1209 aa12.72□□□□□ -0.37
TRAFD1-208ENST00000552890 GNL3LQ9NVN8 582 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-208ENST00000552890 SLC5A1P13866 664 aa12.71□□□□□ -0.37
TRAFD1-208ENST00000552890 RRP1P56182 461 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-208ENST00000552890 PTPN12Q05209 780 aaKnown RBP12.71□□□□□ -0.37
TRAFD1-208ENST00000552890 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
TRAFD1-208ENST00000552890 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
TRAFD1-208ENST00000552890 LPIN2Q92539 896 aa12.71□□□□□ -0.37
TRAFD1-208ENST00000552890 DPF2Q92785 391 aa12.71□□□□□ -0.37
TRAFD1-208ENST00000552890 H7C1D1 291 aa12.7□□□□□ -0.38
TRAFD1-208ENST00000552890 ECE2O60344 883 aa12.7□□□□□ -0.38
TRAFD1-208ENST00000552890 RLBP1P12271 317 aa12.7□□□□□ -0.38
TRAFD1-208ENST00000552890 OS9Q13438 667 aaPredicted RBP12.7□□□□□ -0.38
TRAFD1-208ENST00000552890 AGBL3Q8NEM8 1001 aa12.7□□□□□ -0.38
TRAFD1-208ENST00000552890 SSH3Q8TE77 659 aa12.7□□□□□ -0.38
TRAFD1-208ENST00000552890 ZBTB40Q9NUA8 1239 aa12.7□□□□□ -0.38
TRAFD1-208ENST00000552890 HACL1Q9UJ83 578 aa12.7□□□□□ -0.38
TRAFD1-208ENST00000552890 COG6Q9Y2V7 657 aa12.7□□□□□ -0.38
TRAFD1-208ENST00000552890 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
TRAFD1-208ENST00000552890 USP17L3A6NCW0 530 aa12.69□□□□□ -0.38
TRAFD1-208ENST00000552890 USP17L4A6NCW7 530 aa12.69□□□□□ -0.38
TRAFD1-208ENST00000552890 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
TRAFD1-208ENST00000552890 ZBTB22O15209 634 aa12.69□□□□□ -0.38
TRAFD1-208ENST00000552890 IGSF3O75054 1194 aa12.69□□□□□ -0.38
TRAFD1-208ENST00000552890 STRIP1Q5VSL9 837 aa12.69□□□□□ -0.38
TRAFD1-208ENST00000552890 USP17L1Q7RTZ2 530 aa12.69□□□□□ -0.38
TRAFD1-208ENST00000552890 OGFOD1Q8N543 542 aa12.69□□□□□ -0.38
TRAFD1-208ENST00000552890 TBC1D22AQ8WUA7 517 aa12.69□□□□□ -0.38
TRAFD1-208ENST00000552890 ZNF594Q96JF6 807 aaPredicted RBP12.69□□□□□ -0.38
TRAFD1-208ENST00000552890 SEMA3EO15041 775 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms