RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 UBTFL1P0CB47 393 aaPredicted RBP9.67□□□□□ -0.86
NPAS3-213ENST00000552874 CCDC152Q4G0S7 254 aa9.67□□□□□ -0.86
NPAS3-213ENST00000552874 DALRD3Q5D0E6 543 aaKnown RBP9.67□□□□□ -0.86
NPAS3-213ENST00000552874 LMBR1LQ6UX01 489 aa9.67□□□□□ -0.86
NPAS3-213ENST00000552874 ITPRIPQ8IWB1 547 aa9.67□□□□□ -0.86
NPAS3-213ENST00000552874 FTSJ3Q8IY81 847 aaKnown RBP9.67□□□□□ -0.86
NPAS3-213ENST00000552874 CNKSR1Q969H4 720 aa9.67□□□□□ -0.86
NPAS3-213ENST00000552874 RBM17Q96I25 401 aaKnown RBP9.67□□□□□ -0.86
NPAS3-213ENST00000552874 ZBTB40Q9NUA8 1239 aa9.67□□□□□ -0.86
NPAS3-213ENST00000552874 WWC3Q9ULE0 1092 aa9.67□□□□□ -0.86
NPAS3-213ENST00000552874 COG6Q9Y2V7 657 aa9.67□□□□□ -0.86
NPAS3-213ENST00000552874 WDR90Q96KV7 1748 aa9.67□□□□□ -0.86
NPAS3-213ENST00000552874 NPHP1O15259 732 aa9.66□□□□□ -0.86
NPAS3-213ENST00000552874 HSP90B1P14625 803 aaKnown RBP9.66□□□□□ -0.86
NPAS3-213ENST00000552874 ITGA6P23229 1130 aa9.66□□□□□ -0.86
NPAS3-213ENST00000552874 RPGRQ92834 1020 aaKnown RBP9.66□□□□□ -0.86
NPAS3-213ENST00000552874 ZNF622Q969S3 477 aaKnown RBP eCLIP9.66□□□□□ -0.86
NPAS3-213ENST00000552874 CCDC85AQ96PX6 553 aaPredicted RBP9.66□□□□□ -0.86
NPAS3-213ENST00000552874 ATP6V0A2Q9Y487 856 aa9.66□□□□□ -0.86
NPAS3-213ENST00000552874 SCN4AP35499 1836 aa9.66□□□□□ -0.86
NPAS3-213ENST00000552874 MAST2Q6P0Q8 1798 aa9.65□□□□□ -0.86
NPAS3-213ENST00000552874 PNMA6EA0A0J9YXQ4 647 aa9.65□□□□□ -0.86
NPAS3-213ENST00000552874 GNAI3P08754 354 aa9.65□□□□□ -0.86
NPAS3-213ENST00000552874 RASSF7Q02833 373 aa9.65□□□□□ -0.86
NPAS3-213ENST00000552874 PTPN12Q05209 780 aaKnown RBP9.65□□□□□ -0.86
NPAS3-213ENST00000552874 DDX46Q7L014 1031 aaKnown RBP9.65□□□□□ -0.86
NPAS3-213ENST00000552874 VGLL2Q8N8G2 317 aa9.65□□□□□ -0.86
NPAS3-213ENST00000552874 RTFDC1Q9BY42 306 aaPredicted RBP9.65□□□□□ -0.86
NPAS3-213ENST00000552874 C1orf115Q9H7X2 142 aa9.65□□□□□ -0.86
NPAS3-213ENST00000552874 DDX19BQ9UMR2 479 aa9.65□□□□□ -0.86
NPAS3-213ENST00000552874 BCS1LQ9Y276 419 aa9.65□□□□□ -0.86
NPAS3-213ENST00000552874 CDK5RAP2Q96SN8 1893 aa9.64□□□□□ -0.87
NPAS3-213ENST00000552874 C21orf2O43822 256 aa9.64□□□□□ -0.87
NPAS3-213ENST00000552874 MS4A1P11836 297 aa9.64□□□□□ -0.87
NPAS3-213ENST00000552874 ALDH1B1P30837 517 aa9.64□□□□□ -0.87
NPAS3-213ENST00000552874 CEP85Q6P2H3 762 aa9.64□□□□□ -0.87
NPAS3-213ENST00000552874 TMC4Q7Z404 712 aa9.64□□□□□ -0.87
NPAS3-213ENST00000552874 SIRT2Q8IXJ6 389 aa9.64□□□□□ -0.87
NPAS3-213ENST00000552874 SP8Q8IXZ3 490 aa9.64□□□□□ -0.87
NPAS3-213ENST00000552874 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.64□□□□□ -0.87
NPAS3-213ENST00000552874 ZNF594Q96JF6 807 aaPredicted RBP9.64□□□□□ -0.87
NPAS3-213ENST00000552874 PSMD1Q99460 953 aa9.64□□□□□ -0.87
NPAS3-213ENST00000552874 BSDC1Q9NW68 430 aaPredicted RBP9.64□□□□□ -0.87
NPAS3-213ENST00000552874 PODXL2Q9NZ53 605 aa9.64□□□□□ -0.87
NPAS3-213ENST00000552874 ZNF609O15014 1411 aa9.64□□□□□ -0.87
NPAS3-213ENST00000552874 WTIPA6NIX2 430 aaPredicted RBP9.63□□□□□ -0.87
NPAS3-213ENST00000552874 BBOX1O75936 387 aa9.63□□□□□ -0.87
NPAS3-213ENST00000552874 GNAI2P04899 355 aa9.63□□□□□ -0.87
NPAS3-213ENST00000552874 RPS8P62241 208 aaKnown RBP9.63□□□□□ -0.87
NPAS3-213ENST00000552874 GPSM2P81274 684 aa9.63□□□□□ -0.87
NPAS3-213ENST00000552874 CCDC93Q567U6 631 aa9.63□□□□□ -0.87
NPAS3-213ENST00000552874 ATG9AQ7Z3C6 839 aa9.63□□□□□ -0.87
NPAS3-213ENST00000552874 KLHDC4Q8TBB5 520 aa9.63□□□□□ -0.87
NPAS3-213ENST00000552874 SSH3Q8TE77 659 aa9.63□□□□□ -0.87
NPAS3-213ENST00000552874 CRBNQ96SW2 442 aa9.63□□□□□ -0.87
NPAS3-213ENST00000552874 CDC5LQ99459 802 aaKnown RBP9.63□□□□□ -0.87
NPAS3-213ENST00000552874 PUS3Q9BZE2 481 aaKnown RBP9.63□□□□□ -0.87
NPAS3-213ENST00000552874 SUPT16HQ9Y5B9 1047 aaKnown RBP9.63□□□□□ -0.87
NPAS3-213ENST00000552874 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.63□□□□□ -0.87
NPAS3-213ENST00000552874 COL1A1P02452 1464 aaPredicted RBP9.62□□□□□ -0.87
NPAS3-213ENST00000552874 ANKRD18BA2A2Z9 1011 aa9.62□□□□□ -0.87
NPAS3-213ENST00000552874 FKBP4Q02790 459 aaKnown RBP eCLIP9.62□□□□□ -0.87
NPAS3-213ENST00000552874 LRRC24Q50LG9 513 aa9.62□□□□□ -0.87
NPAS3-213ENST00000552874 SOGA3Q5TF21 947 aa9.62□□□□□ -0.87
NPAS3-213ENST00000552874 ANKRD18AQ8IVF6 992 aa9.62□□□□□ -0.87
NPAS3-213ENST00000552874 COPRSQ9NQ92 184 aa9.62□□□□□ -0.87
NPAS3-213ENST00000552874 MINPP1Q9UNW1 487 aa9.62□□□□□ -0.87
NPAS3-213ENST00000552874 PA2G4Q9UQ80 394 aaKnown RBP9.62□□□□□ -0.87
NPAS3-213ENST00000552874 RIPOR2Q9Y4F9 1068 aa9.62□□□□□ -0.87
NPAS3-213ENST00000552874 AK9Q5TCS8 1911 aa9.62□□□□□ -0.87
NPAS3-213ENST00000552874 MED23Q9ULK4 1368 aa9.62□□□□□ -0.87
NPAS3-213ENST00000552874 FOCADQ5VW36 1801 aa9.61□□□□□ -0.87
NPAS3-213ENST00000552874 ATP8B2P98198 1209 aa9.61□□□□□ -0.87
NPAS3-213ENST00000552874 IFIT5Q13325 482 aaKnown RBP9.61□□□□□ -0.87
NPAS3-213ENST00000552874 CC2D2BQ6DHV5 1058 aa9.61□□□□□ -0.87
NPAS3-213ENST00000552874 POLLQ9UGP5 575 aa9.61□□□□□ -0.87
NPAS3-213ENST00000552874 POLR2AP24928 1970 aaKnown RBP9.61□□□□□ -0.87
NPAS3-213ENST00000552874 XDHP47989 1333 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 SRGAP3O43295 1099 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 GRIN3BO60391 1043 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 CIAO1O76071 339 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 FGFR2P21802 821 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 KLRK1P26718 216 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 CHRNDQ07001 517 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 GPR162Q16538 588 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 CCDC57Q2TAC2 916 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 RTKN2Q8IZC4 609 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 TBC1D16Q8TBP0 767 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 GPR101Q96P66 508 aaPredicted RBP9.6□□□□□ -0.87
NPAS3-213ENST00000552874 TAOK3Q9H2K8 898 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 FBXO3Q9UK99 471 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 NOP58Q9Y2X3 529 aaKnown RBP9.6□□□□□ -0.87
NPAS3-213ENST00000552874 PCDHB15Q9Y5E8 787 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 MYH2Q9UKX2 1941 aa9.6□□□□□ -0.87
NPAS3-213ENST00000552874 SNAP23O00161 211 aa9.59□□□□□ -0.87
NPAS3-213ENST00000552874 EYA2O00167 538 aa9.59□□□□□ -0.87
NPAS3-213ENST00000552874 IGHMBP2P38935 993 aaKnown RBP9.59□□□□□ -0.87
NPAS3-213ENST00000552874 KIAA2012Q0VF49 1180 aa9.59□□□□□ -0.87
NPAS3-213ENST00000552874 GRIPAP1Q4V328 841 aa9.59□□□□□ -0.87
NPAS3-213ENST00000552874 C15orf52Q6ZUT6 534 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms