RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
MMP19-209ENST00000552872 TAF5LO75529 589 aa12.47□□□□□ -0.41
MMP19-209ENST00000552872 SASH1O94885 1247 aa12.47□□□□□ -0.41
MMP19-209ENST00000552872 MTX1Q13505 466 aa12.47□□□□□ -0.41
MMP19-209ENST00000552872 SMC5Q8IY18 1101 aa12.47□□□□□ -0.41
MMP19-209ENST00000552872 NLRP3Q96P20 1036 aa12.47□□□□□ -0.41
MMP19-209ENST00000552872 FSD2A1L4K1 749 aa12.46□□□□□ -0.41
MMP19-209ENST00000552872 ST5P78524 1137 aa12.46□□□□□ -0.41
MMP19-209ENST00000552872 TFCP2Q12800 502 aa12.46□□□□□ -0.41
MMP19-209ENST00000552872 TLR7Q9NYK1 1049 aaKnown RBP12.46□□□□□ -0.41
MMP19-209ENST00000552872 CHD1LQ86WJ1 897 aa12.45□□□□□ -0.42
MMP19-209ENST00000552872 PLA2G12BQ9BX93 195 aa12.45□□□□□ -0.42
MMP19-209ENST00000552872 CCDC8Q9H0W5 538 aaPredicted RBP12.45□□□□□ -0.42
MMP19-209ENST00000552872 PDCL3Q9H2J4 239 aa12.45□□□□□ -0.42
MMP19-209ENST00000552872 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
MMP19-209ENST00000552872 ANKRD18BA2A2Z9 1011 aa12.45□□□□□ -0.42
MMP19-209ENST00000552872 NUCB1Q02818 461 aa12.45□□□□□ -0.42
MMP19-209ENST00000552872 G3BP1Q13283 466 aaKnown RBP eCLIP12.45□□□□□ -0.42
MMP19-209ENST00000552872 CCDC152Q4G0S7 254 aa12.45□□□□□ -0.42
MMP19-209ENST00000552872 LDHAL6AQ6ZMR3 332 aa12.45□□□□□ -0.42
MMP19-209ENST00000552872 ATG9AQ7Z3C6 839 aa12.45□□□□□ -0.42
MMP19-209ENST00000552872 IBTKQ9P2D0 1353 aaPredicted RBP12.45□□□□□ -0.42
MMP19-209ENST00000552872 RHPN1Q8TCX5 695 aa12.44□□□□□ -0.42
MMP19-209ENST00000552872 SLKQ9H2G2 1235 aaPredicted RBP12.44□□□□□ -0.42
MMP19-209ENST00000552872 CNNM1Q9NRU3 951 aa12.44□□□□□ -0.42
MMP19-209ENST00000552872 LRRCC1Q9C099 1032 aa12.44□□□□□ -0.42
MMP19-209ENST00000552872 ANTXR1Q9H6X2 564 aa12.44□□□□□ -0.42
MMP19-209ENST00000552872 NDUFB9Q9Y6M9 179 aa12.44□□□□□ -0.42
MMP19-209ENST00000552872 COL11A2P13942 1736 aaPredicted RBP12.44□□□□□ -0.42
MMP19-209ENST00000552872 TPM2P07951 284 aa12.43□□□□□ -0.42
MMP19-209ENST00000552872 TIMM10P62072 90 aa12.43□□□□□ -0.42
MMP19-209ENST00000552872 ZNF622Q969S3 477 aaKnown RBP eCLIP12.43□□□□□ -0.42
MMP19-209ENST00000552872 GCC1Q96CN9 775 aa12.43□□□□□ -0.42
MMP19-209ENST00000552872 GPR101Q96P66 508 aaPredicted RBP12.43□□□□□ -0.42
MMP19-209ENST00000552872 A0A0G2JLW4 131 aa12.43□□□□□ -0.42
MMP19-209ENST00000552872 MAP4K4O95819 1239 aaPredicted RBP12.43□□□□□ -0.42
MMP19-209ENST00000552872 SLC10A5Q5PT55 438 aa12.43□□□□□ -0.42
MMP19-209ENST00000552872 RPGRQ92834 1020 aaKnown RBP12.43□□□□□ -0.42
MMP19-209ENST00000552872 MPHOSPH8Q99549 860 aa12.43□□□□□ -0.42
MMP19-209ENST00000552872 HDAC5Q9UQL6 1122 aa12.43□□□□□ -0.42
MMP19-209ENST00000552872 AACSQ86V21 672 aa12.42□□□□□ -0.42
MMP19-209ENST00000552872 NEUROD6Q96NK8 337 aa12.42□□□□□ -0.42
MMP19-209ENST00000552872 COPRSQ9NQ92 184 aa12.42□□□□□ -0.42
MMP19-209ENST00000552872 ESPNB1AK53 854 aa12.42□□□□□ -0.42
MMP19-209ENST00000552872 EYA2O00167 538 aa12.42□□□□□ -0.42
MMP19-209ENST00000552872 METTL24Q5JXM2 366 aa12.42□□□□□ -0.42
MMP19-209ENST00000552872 DDX46Q7L014 1031 aaKnown RBP12.42□□□□□ -0.42
MMP19-209ENST00000552872 EAF2Q96CJ1 260 aaPredicted RBP12.42□□□□□ -0.42
MMP19-209ENST00000552872 SF3B3Q15393 1217 aaKnown RBP12.41□□□□□ -0.42
MMP19-209ENST00000552872 MTFR1LQ9H019 292 aa12.41□□□□□ -0.42
MMP19-209ENST00000552872 ADORA1P30542 326 aa12.41□□□□□ -0.42
MMP19-209ENST00000552872 C2CD5Q86YS7 1000 aa12.41□□□□□ -0.42
MMP19-209ENST00000552872 ANKRD18AQ8IVF6 992 aa12.41□□□□□ -0.42
MMP19-209ENST00000552872 NRXN2Q9P2S2 1712 aa12.4□□□□□ -0.42
MMP19-209ENST00000552872 RIC1Q4ADV7 1423 aa12.4□□□□□ -0.42
MMP19-209ENST00000552872 HMGB2P26583 209 aaKnown RBP12.4□□□□□ -0.42
MMP19-209ENST00000552872 KLRK1P26718 216 aa12.4□□□□□ -0.42
MMP19-209ENST00000552872 IGHMBP2P38935 993 aaKnown RBP12.4□□□□□ -0.42
MMP19-209ENST00000552872 BRIP1Q9BX63 1249 aa12.4□□□□□ -0.42
MMP19-209ENST00000552872 RIPOR2Q9Y4F9 1068 aa12.4□□□□□ -0.42
MMP19-209ENST00000552872 RGL2O15211 777 aa12.4□□□□□ -0.43
MMP19-209ENST00000552872 SRGNP10124 158 aa12.4□□□□□ -0.43
MMP19-209ENST00000552872 RPS8P62241 208 aaKnown RBP12.4□□□□□ -0.43
MMP19-209ENST00000552872 KIF1BPQ96EK5 621 aa12.4□□□□□ -0.43
MMP19-209ENST00000552872 PTGER2P43116 358 aa12.39□□□□□ -0.43
MMP19-209ENST00000552872 MRE11P49959 708 aa12.39□□□□□ -0.43
MMP19-209ENST00000552872 CHRNDQ07001 517 aa12.39□□□□□ -0.43
MMP19-209ENST00000552872 DBNDD2Q9BQY9 259 aa12.39□□□□□ -0.43
MMP19-209ENST00000552872 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
MMP19-209ENST00000552872 CRY2Q49AN0 593 aa12.38□□□□□ -0.43
MMP19-209ENST00000552872 PLEKHM2Q8IWE5 1019 aa12.38□□□□□ -0.43
MMP19-209ENST00000552872 MINPP1Q9UNW1 487 aa12.38□□□□□ -0.43
MMP19-209ENST00000552872 IQSEC3Q9UPP2 1182 aaPredicted RBP12.38□□□□□ -0.43
MMP19-209ENST00000552872 SLX4Q8IY92 1834 aa12.38□□□□□ -0.43
MMP19-209ENST00000552872 DPEP1P16444 411 aa12.38□□□□□ -0.43
MMP19-209ENST00000552872 POLD1P28340 1107 aa12.38□□□□□ -0.43
MMP19-209ENST00000552872 TNNI3KQ59H18 835 aa12.38□□□□□ -0.43
MMP19-209ENST00000552872 DHX37Q8IY37 1157 aaKnown RBP12.38□□□□□ -0.43
MMP19-209ENST00000552872 NLGN2Q8NFZ4 835 aa12.38□□□□□ -0.43
MMP19-209ENST00000552872 CDC5LQ99459 802 aaKnown RBP12.38□□□□□ -0.43
MMP19-209ENST00000552872 DBNLQ9UJU6 430 aaKnown RBP12.38□□□□□ -0.43
MMP19-209ENST00000552872 FPGT-TNNI3KV9GXZ4 949 aa12.38□□□□□ -0.43
MMP19-209ENST00000552872 A0A1B0GUL7 405 aa12.37□□□□□ -0.43
MMP19-209ENST00000552872 SEC24BO95487 1268 aa12.37□□□□□ -0.43
MMP19-209ENST00000552872 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
MMP19-209ENST00000552872 IL15P40933 162 aaPredicted RBP12.37□□□□□ -0.43
MMP19-209ENST00000552872 CLASRPQ8N2M8 674 aaKnown RBP12.37□□□□□ -0.43
MMP19-209ENST00000552872 SLC16A10Q8TF71 515 aa12.37□□□□□ -0.43
MMP19-209ENST00000552872 EDC3Q96F86 508 aaKnown RBP12.37□□□□□ -0.43
MMP19-209ENST00000552872 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
MMP19-209ENST00000552872 H0YIN7 160 aa12.37□□□□□ -0.43
MMP19-209ENST00000552872 RAB11FIP3O75154 756 aa12.37□□□□□ -0.43
MMP19-209ENST00000552872 PDE6BP35913 854 aa12.37□□□□□ -0.43
MMP19-209ENST00000552872 GRAPQ13588 217 aa12.37□□□□□ -0.43
MMP19-209ENST00000552872 PI16Q6UXB8 463 aa12.37□□□□□ -0.43
MMP19-209ENST00000552872 GRAPLQ8TC17 118 aaPredicted RBP12.37□□□□□ -0.43
MMP19-209ENST00000552872 SGIP1Q9BQI5 828 aa12.37□□□□□ -0.43
MMP19-209ENST00000552872 UPF2Q9HAU5 1272 aaKnown RBP12.37□□□□□ -0.43
MMP19-209ENST00000552872 ANKIB1Q9P2G1 1089 aa12.37□□□□□ -0.43
MMP19-209ENST00000552872 JAG2Q9Y219 1238 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms