RNA–Protein interactions for RNA: ENST00000552818.1

PFKM-229, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-229ENST00000552818 ZNF827Q17R98 1081 aa11.81□□□□□ -0.52
PFKM-229ENST00000552818 USPL1Q5W0Q7 1092 aa11.81□□□□□ -0.52
PFKM-229ENST00000552818 NUTM1Q86Y26 1132 aa11.81□□□□□ -0.52
PFKM-229ENST00000552818 TTLL11Q8NHH1 800 aa11.81□□□□□ -0.52
PFKM-229ENST00000552818 PI4K2BQ8TCG2 481 aa11.81□□□□□ -0.52
PFKM-229ENST00000552818 ZNF594Q96JF6 807 aaPredicted RBP11.81□□□□□ -0.52
PFKM-229ENST00000552818 PUS3Q9BZE2 481 aaKnown RBP11.81□□□□□ -0.52
PFKM-229ENST00000552818 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
PFKM-229ENST00000552818 SIL1Q9H173 461 aa11.81□□□□□ -0.52
PFKM-229ENST00000552818 TRMT112Q9UI30 125 aaKnown RBP11.81□□□□□ -0.52
PFKM-229ENST00000552818 NIP7Q9Y221 180 aaKnown RBP eCLIP11.81□□□□□ -0.52
PFKM-229ENST00000552818 AOX1Q06278 1338 aa11.81□□□□□ -0.52
PFKM-229ENST00000552818 COL11A2P13942 1736 aaPredicted RBP11.8□□□□□ -0.52
PFKM-229ENST00000552818 IRS4O14654 1257 aaPredicted RBP11.8□□□□□ -0.52
PFKM-229ENST00000552818 MX1P20591 662 aa11.8□□□□□ -0.52
PFKM-229ENST00000552818 CTSWP56202 376 aa11.8□□□□□ -0.52
PFKM-229ENST00000552818 PARP10Q53GL7 1025 aa11.8□□□□□ -0.52
PFKM-229ENST00000552818 C3orf67Q6ZVT6 689 aa11.8□□□□□ -0.52
PFKM-229ENST00000552818 EAF2Q96CJ1 260 aaPredicted RBP11.8□□□□□ -0.52
PFKM-229ENST00000552818 TLR7Q9NYK1 1049 aaKnown RBP11.8□□□□□ -0.52
PFKM-229ENST00000552818 RTCBQ9Y3I0 505 aaKnown RBP11.8□□□□□ -0.52
PFKM-229ENST00000552818 HCLS1P14317 486 aaPredicted RBP11.79□□□□□ -0.52
PFKM-229ENST00000552818 SDSP20132 328 aa11.79□□□□□ -0.52
PFKM-229ENST00000552818 LRRC24Q50LG9 513 aa11.79□□□□□ -0.52
PFKM-229ENST00000552818 HSP90AB4PQ58FF6 505 aa11.79□□□□□ -0.52
PFKM-229ENST00000552818 UTP14AQ9BVJ6 771 aaKnown RBP11.79□□□□□ -0.52
PFKM-229ENST00000552818 GREM2Q9H772 168 aa11.79□□□□□ -0.52
PFKM-229ENST00000552818 SH3TC1Q8TE82 1336 aa11.79□□□□□ -0.52
PFKM-229ENST00000552818 DOCK2Q92608 1830 aa11.79□□□□□ -0.52
PFKM-229ENST00000552818 RTL9Q8NET4 1388 aa11.79□□□□□ -0.52
PFKM-229ENST00000552818 LRRC37AA6NMS7 1700 aa11.78□□□□□ -0.52
PFKM-229ENST00000552818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.78□□□□□ -0.52
PFKM-229ENST00000552818 PDE8AO60658 829 aa11.78□□□□□ -0.52
PFKM-229ENST00000552818 PHF14O94880 888 aa11.78□□□□□ -0.52
PFKM-229ENST00000552818 TFCP2Q12800 502 aa11.78□□□□□ -0.52
PFKM-229ENST00000552818 ERC1Q8IUD2 1116 aa11.78□□□□□ -0.52
PFKM-229ENST00000552818 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
PFKM-229ENST00000552818 CCDC85AQ96PX6 553 aaPredicted RBP11.78□□□□□ -0.52
PFKM-229ENST00000552818 BCL11AQ9H165 835 aa11.78□□□□□ -0.52
PFKM-229ENST00000552818 ZNF652Q9Y2D9 606 aa11.78□□□□□ -0.52
PFKM-229ENST00000552818 CACNA1SQ13698 1873 aa11.78□□□□□ -0.52
PFKM-229ENST00000552818 MYH13Q9UKX3 1938 aa11.78□□□□□ -0.52
PFKM-229ENST00000552818 FAM177BA6PVY3 158 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 EYA2O00167 538 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 CIAO1O76071 339 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 APBA3O96018 575 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 SSFA2P28290 1259 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 G3BP1Q13283 466 aaKnown RBP eCLIP11.77□□□□□ -0.53
PFKM-229ENST00000552818 CAMK2BQ13554 666 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 ERFEQ4G0M1 354 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 RBM26Q5T8P6 1007 aaKnown RBP11.77□□□□□ -0.53
PFKM-229ENST00000552818 TBC1D9Q6ZT07 1266 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 VGLL2Q8N8G2 317 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 IL27Q8NEV9 243 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 MS4A4AQ96JQ5 239 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 ZMYND15Q9H091 742 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 DBNLQ9UJU6 430 aaKnown RBP11.77□□□□□ -0.53
PFKM-229ENST00000552818 LTBP1Q14766 1721 aa11.77□□□□□ -0.53
PFKM-229ENST00000552818 MAP3K13O43283 966 aa11.76□□□□□ -0.53
PFKM-229ENST00000552818 GYS1P13807 737 aa11.76□□□□□ -0.53
PFKM-229ENST00000552818 ITGA6P23229 1130 aa11.76□□□□□ -0.53
PFKM-229ENST00000552818 OS9Q13438 667 aaPredicted RBP11.76□□□□□ -0.53
PFKM-229ENST00000552818 NFIXQ14938 502 aa11.76□□□□□ -0.53
PFKM-229ENST00000552818 TNNI3KQ59H18 835 aa11.76□□□□□ -0.53
PFKM-229ENST00000552818 NPM2Q86SE8 214 aaKnown RBP11.76□□□□□ -0.53
PFKM-229ENST00000552818 AACSQ86V21 672 aa11.76□□□□□ -0.53
PFKM-229ENST00000552818 GPIHBP1Q8IV16 184 aa11.76□□□□□ -0.53
PFKM-229ENST00000552818 KRI1Q8N9T8 703 aaKnown RBP11.76□□□□□ -0.53
PFKM-229ENST00000552818 CHMP3Q9Y3E7 222 aa11.76□□□□□ -0.53
PFKM-229ENST00000552818 RIPOR2Q9Y4F9 1068 aa11.76□□□□□ -0.53
PFKM-229ENST00000552818 FPGT-TNNI3KV9GXZ4 949 aa11.76□□□□□ -0.53
PFKM-229ENST00000552818 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
PFKM-229ENST00000552818 SLC10A5Q5PT55 438 aa11.75□□□□□ -0.53
PFKM-229ENST00000552818 TRAPPC3LQ5T215 181 aa11.75□□□□□ -0.53
PFKM-229ENST00000552818 BICDL1Q6ZP65 573 aa11.75□□□□□ -0.53
PFKM-229ENST00000552818 CLASRPQ8N2M8 674 aaKnown RBP11.75□□□□□ -0.53
PFKM-229ENST00000552818 CAMKK2Q96RR4 588 aa11.75□□□□□ -0.53
PFKM-229ENST00000552818 CCDC8Q9H0W5 538 aaPredicted RBP11.75□□□□□ -0.53
PFKM-229ENST00000552818 KDM4CQ9H3R0 1056 aa11.75□□□□□ -0.53
PFKM-229ENST00000552818 ANO8Q9HCE9 1232 aaPredicted RBP11.75□□□□□ -0.53
PFKM-229ENST00000552818 SEC31BQ9NQW1 1179 aa11.75□□□□□ -0.53
PFKM-229ENST00000552818 TTC41PQ6P2S7 1318 aa11.75□□□□□ -0.53
PFKM-229ENST00000552818 CARMIL3Q8ND23 1372 aa11.75□□□□□ -0.53
PFKM-229ENST00000552818 ZPR1O75312 459 aa11.74□□□□□ -0.53
PFKM-229ENST00000552818 CDC45O75419 566 aa11.74□□□□□ -0.53
PFKM-229ENST00000552818 IL15P40933 162 aaPredicted RBP11.74□□□□□ -0.53
PFKM-229ENST00000552818 IL25Q9H293 177 aa11.74□□□□□ -0.53
PFKM-229ENST00000552818 GPR108Q9NPR9 543 aa11.74□□□□□ -0.53
PFKM-229ENST00000552818 PODXL2Q9NZ53 605 aa11.74□□□□□ -0.53
PFKM-229ENST00000552818 PNPLA7Q6ZV29 1317 aa11.74□□□□□ -0.53
PFKM-229ENST00000552818 TM4SF1P30408 202 aa11.73□□□□□ -0.53
PFKM-229ENST00000552818 RFC4P35249 363 aa11.73□□□□□ -0.53
PFKM-229ENST00000552818 DDR1Q08345 913 aa11.73□□□□□ -0.53
PFKM-229ENST00000552818 IFIT5Q13325 482 aaKnown RBP11.73□□□□□ -0.53
PFKM-229ENST00000552818 SF3B3Q15393 1217 aaKnown RBP11.73□□□□□ -0.53
PFKM-229ENST00000552818 CCDC57Q2TAC2 916 aa11.73□□□□□ -0.53
PFKM-229ENST00000552818 COL23A1Q86Y22 540 aaPredicted RBP11.73□□□□□ -0.53
PFKM-229ENST00000552818 KIF12Q96FN5 646 aa11.73□□□□□ -0.53
PFKM-229ENST00000552818 DBNDD2Q9BQY9 259 aa11.73□□□□□ -0.53
PFKM-229ENST00000552818 ECHDC1Q9NTX5 307 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms