RNA–Protein interactions for RNA: ENST00000552742.5

PFDN5-218, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-218ENST00000552742 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
PFDN5-218ENST00000552742 BICC1Q9H694 974 aaKnown RBP12.38□□□□□ -0.43
PFDN5-218ENST00000552742 PODXL2Q9NZ53 605 aa12.38□□□□□ -0.43
PFDN5-218ENST00000552742 ZNF541Q9H0D2 1346 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 CEP350Q5VT06 3117 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 UFL1O94874 794 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 VEGFAP15692 232 aaPredicted RBP12.37□□□□□ -0.43
PFDN5-218ENST00000552742 KIAA2012Q0VF49 1180 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 WASHC4Q2M389 1173 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 CCDC57Q2TAC2 916 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 INTS3Q68E01 1043 aaKnown RBP12.37□□□□□ -0.43
PFDN5-218ENST00000552742 NIM1KQ8IY84 436 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 MPHOSPH8Q99549 860 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 GGA1Q9UJY5 639 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 ZNRF3Q9ULT6 936 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 DUOX1Q9NRD9 1551 aa12.37□□□□□ -0.43
PFDN5-218ENST00000552742 EIF6P56537 245 aaKnown RBP12.36□□□□□ -0.43
PFDN5-218ENST00000552742 DOK7Q18PE1 504 aa12.36□□□□□ -0.43
PFDN5-218ENST00000552742 ZKSCAN2Q63HK3 967 aa12.36□□□□□ -0.43
PFDN5-218ENST00000552742 HELBQ8NG08 1087 aaPredicted RBP12.36□□□□□ -0.43
PFDN5-218ENST00000552742 YTHDC1Q96MU7 727 aaKnown RBP12.36□□□□□ -0.43
PFDN5-218ENST00000552742 ZC3H12CQ9C0D7 883 aaKnown RBP12.36□□□□□ -0.43
PFDN5-218ENST00000552742 GJA3Q9Y6H8 435 aa12.36□□□□□ -0.43
PFDN5-218ENST00000552742 LTBP1Q14766 1721 aa12.36□□□□□ -0.43
PFDN5-218ENST00000552742 XDHP47989 1333 aa12.36□□□□□ -0.43
PFDN5-218ENST00000552742 UBTFL1P0CB47 393 aaPredicted RBP12.35□□□□□ -0.43
PFDN5-218ENST00000552742 CXCL9Q07325 125 aa12.35□□□□□ -0.43
PFDN5-218ENST00000552742 RABL6Q3YEC7 729 aaPredicted RBP12.35□□□□□ -0.43
PFDN5-218ENST00000552742 LDHAL6AQ6ZMR3 332 aa12.35□□□□□ -0.43
PFDN5-218ENST00000552742 EYA3Q99504 573 aa12.35□□□□□ -0.43
PFDN5-218ENST00000552742 MEIS3Q99687 375 aa12.35□□□□□ -0.43
PFDN5-218ENST00000552742 KCNQ5Q9NR82 932 aa12.35□□□□□ -0.43
PFDN5-218ENST00000552742 YDJCA8MPS7 323 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 TAF5LO75529 589 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 RAD17O75943 681 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 ATP2B4P23634 1241 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 C1QTNF8P60827 252 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 CHRNDQ07001 517 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 TAF7LQ5H9L4 462 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 GPC2Q8N158 579 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 TMEM57Q8N5G2 664 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 PUS3Q9BZE2 481 aaKnown RBP12.34□□□□□ -0.43
PFDN5-218ENST00000552742 ANKRD2Q9GZV1 360 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 DBNDD1Q9H9R9 158 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 LRRFIP2Q9Y608 721 aaKnown RBP12.34□□□□□ -0.43
PFDN5-218ENST00000552742 WDR90Q96KV7 1748 aa12.34□□□□□ -0.43
PFDN5-218ENST00000552742 G3V3G9 751 aa12.33□□□□□ -0.44
PFDN5-218ENST00000552742 SNAP23O00161 211 aa12.33□□□□□ -0.44
PFDN5-218ENST00000552742 PLIN1O60240 522 aa12.33□□□□□ -0.44
PFDN5-218ENST00000552742 RLBP1P12271 317 aa12.33□□□□□ -0.44
PFDN5-218ENST00000552742 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
PFDN5-218ENST00000552742 C16orf71Q8IYS4 520 aaPredicted RBP12.33□□□□□ -0.44
PFDN5-218ENST00000552742 KLHDC4Q8TBB5 520 aa12.33□□□□□ -0.44
PFDN5-218ENST00000552742 L3MBTL3Q96JM7 780 aaPredicted RBP12.33□□□□□ -0.44
PFDN5-218ENST00000552742 CNNM1Q9NRU3 951 aa12.33□□□□□ -0.44
PFDN5-218ENST00000552742 RCAN3Q9UKA8 241 aa12.33□□□□□ -0.44
PFDN5-218ENST00000552742 ECE2O60344 883 aa12.32□□□□□ -0.44
PFDN5-218ENST00000552742 TOMM70O94826 608 aa12.32□□□□□ -0.44
PFDN5-218ENST00000552742 CIAPIN1Q6FI81 312 aa12.32□□□□□ -0.44
PFDN5-218ENST00000552742 TXNRD3Q86VQ6 643 aa12.32□□□□□ -0.44
PFDN5-218ENST00000552742 DZIP1LQ8IYY4 767 aaKnown RBP12.32□□□□□ -0.44
PFDN5-218ENST00000552742 LEMD3Q9Y2U8 911 aa12.32□□□□□ -0.44
PFDN5-218ENST00000552742 RIPOR2Q9Y4F9 1068 aa12.32□□□□□ -0.44
PFDN5-218ENST00000552742 SCN9AQ15858 1988 aa12.32□□□□□ -0.44
PFDN5-218ENST00000552742 ZNF804BA4D1E1 1349 aa12.32□□□□□ -0.44
PFDN5-218ENST00000552742 SCN4AP35499 1836 aa12.32□□□□□ -0.44
PFDN5-218ENST00000552742 GNAI3P08754 354 aa12.31□□□□□ -0.44
PFDN5-218ENST00000552742 RFX5P48382 616 aaPredicted RBP12.31□□□□□ -0.44
PFDN5-218ENST00000552742 TNIP1Q15025 636 aa12.31□□□□□ -0.44
PFDN5-218ENST00000552742 LRRC24Q50LG9 513 aa12.31□□□□□ -0.44
PFDN5-218ENST00000552742 PANK1Q8TE04 598 aa12.31□□□□□ -0.44
PFDN5-218ENST00000552742 TAF1DQ9H5J8 278 aaPredicted RBP12.31□□□□□ -0.44
PFDN5-218ENST00000552742 HACL1Q9UJ83 578 aa12.31□□□□□ -0.44
PFDN5-218ENST00000552742 HDAC5Q9UQL6 1122 aa12.31□□□□□ -0.44
PFDN5-218ENST00000552742 PSMD14O00487 310 aa12.3□□□□□ -0.44
PFDN5-218ENST00000552742 KLRK1P26718 216 aa12.3□□□□□ -0.44
PFDN5-218ENST00000552742 EPS15P42566 896 aa12.3□□□□□ -0.44
PFDN5-218ENST00000552742 KCNJ4P48050 445 aa12.3□□□□□ -0.44
PFDN5-218ENST00000552742 GMPSP49915 693 aaPredicted RBP12.3□□□□□ -0.44
PFDN5-218ENST00000552742 FTSJ3Q8IY81 847 aaKnown RBP12.3□□□□□ -0.44
PFDN5-218ENST00000552742 RBM46Q8TBY0 533 aaKnown RBP12.3□□□□□ -0.44
PFDN5-218ENST00000552742 A0A1B0GUL6 1792 aa12.29□□□□□ -0.44
PFDN5-218ENST00000552742 IQCA1LA6NCM1 817 aa12.29□□□□□ -0.44
PFDN5-218ENST00000552742 GNAI2P04899 355 aa12.29□□□□□ -0.44
PFDN5-218ENST00000552742 POTEIP0CG38 1075 aa12.29□□□□□ -0.44
PFDN5-218ENST00000552742 POTEJP0CG39 1038 aa12.29□□□□□ -0.44
PFDN5-218ENST00000552742 SCNN1DP51172 638 aa12.29□□□□□ -0.44
PFDN5-218ENST00000552742 PTPN12Q05209 780 aaKnown RBP12.29□□□□□ -0.44
PFDN5-218ENST00000552742 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
PFDN5-218ENST00000552742 ZBTB7BO15156 539 aaPredicted RBP12.28□□□□□ -0.44
PFDN5-218ENST00000552742 LMOD1P29536 600 aaPredicted RBP12.28□□□□□ -0.44
PFDN5-218ENST00000552742 EPHX2P34913 555 aa12.28□□□□□ -0.44
PFDN5-218ENST00000552742 EAPPQ56P03 285 aaPredicted RBP12.28□□□□□ -0.44
PFDN5-218ENST00000552742 ITPRIPQ8IWB1 547 aa12.28□□□□□ -0.44
PFDN5-218ENST00000552742 SIL1Q9H173 461 aa12.28□□□□□ -0.44
PFDN5-218ENST00000552742 GPRC5DQ9NZD1 345 aa12.28□□□□□ -0.44
PFDN5-218ENST00000552742 MED23Q9ULK4 1368 aa12.28□□□□□ -0.44
PFDN5-218ENST00000552742 SHTN1A0MZ66 631 aa12.27□□□□□ -0.45
PFDN5-218ENST00000552742 EYA2O00167 538 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms