RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 RNF181Q9P0P0 153 aa16.45■□□□□ 0.22
CDK4-212ENST00000552388 CHMP3Q9Y3E7 222 aa16.45■□□□□ 0.22
CDK4-212ENST00000552388 LRRFIP2Q9Y608 721 aaKnown RBP16.45■□□□□ 0.22
CDK4-212ENST00000552388 DUOX1Q9NRD9 1551 aa16.44■□□□□ 0.22
CDK4-212ENST00000552388 CCDC57Q2TAC2 916 aa16.44■□□□□ 0.22
CDK4-212ENST00000552388 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
CDK4-212ENST00000552388 TMX4Q9H1E5 349 aaPredicted RBP16.44■□□□□ 0.22
CDK4-212ENST00000552388 GNAI2P04899 355 aa16.43■□□□□ 0.22
CDK4-212ENST00000552388 IGHMBP2P38935 993 aaKnown RBP16.43■□□□□ 0.22
CDK4-212ENST00000552388 C20orf194Q5TEA3 1177 aa16.43■□□□□ 0.22
CDK4-212ENST00000552388 TAOK3Q9H2K8 898 aa16.43■□□□□ 0.22
CDK4-212ENST00000552388 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
CDK4-212ENST00000552388 DDX19BQ9UMR2 479 aa16.43■□□□□ 0.22
CDK4-212ENST00000552388 COG6Q9Y2V7 657 aa16.43■□□□□ 0.22
CDK4-212ENST00000552388 FKBP4Q02790 459 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDK4-212ENST00000552388 RASSF7Q02833 373 aa16.42■□□□□ 0.22
CDK4-212ENST00000552388 PSMD1Q99460 953 aa16.42■□□□□ 0.22
CDK4-212ENST00000552388 MTX1Q13505 466 aa16.41■□□□□ 0.22
CDK4-212ENST00000552388 MPNDQ8N594 471 aa16.41■□□□□ 0.22
CDK4-212ENST00000552388 MPHOSPH8Q99549 860 aa16.41■□□□□ 0.22
CDK4-212ENST00000552388 LMNB1P20700 586 aa16.4■□□□□ 0.22
CDK4-212ENST00000552388 RFX5P48382 616 aaPredicted RBP16.4■□□□□ 0.22
CDK4-212ENST00000552388 HTRA3P83110 453 aa16.4■□□□□ 0.22
CDK4-212ENST00000552388 SMC1BQ8NDV3 1235 aa16.4■□□□□ 0.22
CDK4-212ENST00000552388 ZNF594Q96JF6 807 aaPredicted RBP16.4■□□□□ 0.22
CDK4-212ENST00000552388 RTFDC1Q9BY42 306 aaPredicted RBP16.4■□□□□ 0.22
CDK4-212ENST00000552388 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
CDK4-212ENST00000552388 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
CDK4-212ENST00000552388 MINPP1Q9UNW1 487 aa16.4■□□□□ 0.22
CDK4-212ENST00000552388 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
CDK4-212ENST00000552388 GLTPD2A6NH11 291 aa16.39■□□□□ 0.21
CDK4-212ENST00000552388 GPSM2P81274 684 aa16.39■□□□□ 0.21
CDK4-212ENST00000552388 TAF7LQ5H9L4 462 aa16.39■□□□□ 0.21
CDK4-212ENST00000552388 DPP8Q6V1X1 898 aaPredicted RBP16.39■□□□□ 0.21
CDK4-212ENST00000552388 C16orf71Q8IYS4 520 aaPredicted RBP16.39■□□□□ 0.21
CDK4-212ENST00000552388 RRAGCQ9HB90 399 aa16.39■□□□□ 0.21
CDK4-212ENST00000552388 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
CDK4-212ENST00000552388 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
CDK4-212ENST00000552388 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
CDK4-212ENST00000552388 XDHP47989 1333 aa16.38■□□□□ 0.21
CDK4-212ENST00000552388 IARSP41252 1262 aaKnown RBP16.37■□□□□ 0.21
CDK4-212ENST00000552388 PTPN12Q05209 780 aaKnown RBP16.37■□□□□ 0.21
CDK4-212ENST00000552388 ANKRD2Q9GZV1 360 aa16.37■□□□□ 0.21
CDK4-212ENST00000552388 VPS33BQ9H267 617 aa16.37■□□□□ 0.21
CDK4-212ENST00000552388 C1orf115Q9H7X2 142 aa16.37■□□□□ 0.21
CDK4-212ENST00000552388 CNNM1Q9NRU3 951 aa16.37■□□□□ 0.21
CDK4-212ENST00000552388 POTECB2RU33 542 aa16.36■□□□□ 0.21
CDK4-212ENST00000552388 SRGAP3O43295 1099 aa16.36■□□□□ 0.21
CDK4-212ENST00000552388 CHRNDQ07001 517 aa16.36■□□□□ 0.21
CDK4-212ENST00000552388 COL13A1Q5TAT6 717 aaPredicted RBP16.36■□□□□ 0.21
CDK4-212ENST00000552388 KLHDC4Q8TBB5 520 aa16.36■□□□□ 0.21
CDK4-212ENST00000552388 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
CDK4-212ENST00000552388 COPRSQ9NQ92 184 aa16.36■□□□□ 0.21
CDK4-212ENST00000552388 ZNF277Q9NRM2 450 aaPredicted RBP16.36■□□□□ 0.21
CDK4-212ENST00000552388 ANKIB1Q9P2G1 1089 aa16.36■□□□□ 0.21
CDK4-212ENST00000552388 POLLQ9UGP5 575 aa16.36■□□□□ 0.21
CDK4-212ENST00000552388 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
CDK4-212ENST00000552388 RIPOR2Q9Y4F9 1068 aa16.36■□□□□ 0.21
CDK4-212ENST00000552388 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
CDK4-212ENST00000552388 COL4A5P29400 1685 aa16.36■□□□□ 0.21
CDK4-212ENST00000552388 PSME4Q14997 1843 aa16.35■□□□□ 0.21
CDK4-212ENST00000552388 PNMA6EA0A0J9YXQ4 647 aa16.35■□□□□ 0.21
CDK4-212ENST00000552388 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
CDK4-212ENST00000552388 PUS3Q9BZE2 481 aaKnown RBP16.35■□□□□ 0.21
CDK4-212ENST00000552388 GGA1Q9UJY5 639 aa16.35■□□□□ 0.21
CDK4-212ENST00000552388 C6orf229H3BNL8 230 aa16.34■□□□□ 0.21
CDK4-212ENST00000552388 EYA2O00167 538 aa16.34■□□□□ 0.21
CDK4-212ENST00000552388 VEGFAP15692 232 aaPredicted RBP16.34■□□□□ 0.21
CDK4-212ENST00000552388 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
CDK4-212ENST00000552388 KIAA2012Q0VF49 1180 aa16.34■□□□□ 0.21
CDK4-212ENST00000552388 POLA2Q14181 598 aa16.34■□□□□ 0.21
CDK4-212ENST00000552388 LRRC24Q50LG9 513 aa16.34■□□□□ 0.21
CDK4-212ENST00000552388 LEMD3Q9Y2U8 911 aa16.34■□□□□ 0.21
CDK4-212ENST00000552388 MROH5Q6ZUA9 1318 aa16.34■□□□□ 0.21
CDK4-212ENST00000552388 PPIP5K2O43314 1243 aa16.33■□□□□ 0.2
CDK4-212ENST00000552388 UFL1O94874 794 aa16.33■□□□□ 0.2
CDK4-212ENST00000552388 CEP85Q6P2H3 762 aa16.33■□□□□ 0.2
CDK4-212ENST00000552388 SSH3Q8TE77 659 aa16.33■□□□□ 0.2
CDK4-212ENST00000552388 EYA3Q99504 573 aa16.33■□□□□ 0.2
CDK4-212ENST00000552388 ZNF804BA4D1E1 1349 aa16.32■□□□□ 0.2
CDK4-212ENST00000552388 TAF5LO75529 589 aa16.32■□□□□ 0.2
CDK4-212ENST00000552388 CIAO1O76071 339 aa16.32■□□□□ 0.2
CDK4-212ENST00000552388 AOC3Q16853 763 aa16.32■□□□□ 0.2
CDK4-212ENST00000552388 WASHC4Q2M389 1173 aa16.32■□□□□ 0.2
CDK4-212ENST00000552388 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
CDK4-212ENST00000552388 RPAP2Q8IXW5 612 aaPredicted RBP16.32■□□□□ 0.2
CDK4-212ENST00000552388 LARGE2Q8N3Y3 721 aa16.32■□□□□ 0.2
CDK4-212ENST00000552388 ARAP2Q8WZ64 1704 aa16.32■□□□□ 0.2
CDK4-212ENST00000552388 MED23Q9ULK4 1368 aa16.32■□□□□ 0.2
CDK4-212ENST00000552388 PA2G4Q9UQ80 394 aaKnown RBP16.32■□□□□ 0.2
CDK4-212ENST00000552388 SCN9AQ15858 1988 aa16.31■□□□□ 0.2
CDK4-212ENST00000552388 ZNF646O15015 1829 aaPredicted RBP16.31■□□□□ 0.2
CDK4-212ENST00000552388 WTIPA6NIX2 430 aaPredicted RBP16.31■□□□□ 0.2
CDK4-212ENST00000552388 VGLL2Q8N8G2 317 aa16.31■□□□□ 0.2
CDK4-212ENST00000552388 HELBQ8NG08 1087 aaPredicted RBP16.31■□□□□ 0.2
CDK4-212ENST00000552388 JDP2Q8WYK2 163 aa16.31■□□□□ 0.2
CDK4-212ENST00000552388 CRBNQ96SW2 442 aa16.31■□□□□ 0.2
CDK4-212ENST00000552388 ADAMTSL1Q8N6G6 1762 aa16.31■□□□□ 0.2
CDK4-212ENST00000552388 MYH13Q9UKX3 1938 aa16.3■□□□□ 0.2
CDK4-212ENST00000552388 IL15P40933 162 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms