RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 PNMA8AQ86V59 439 aaPredicted RBP9.3□□□□□ -0.92
SMARCD1-210ENST00000551352 SP8Q8IXZ3 490 aa9.3□□□□□ -0.92
SMARCD1-210ENST00000551352 TRPM4Q8TD43 1214 aa9.3□□□□□ -0.92
SMARCD1-210ENST00000551352 CELF1Q92879 486 aaKnown RBP9.3□□□□□ -0.92
SMARCD1-210ENST00000551352 GPR101Q96P66 508 aaPredicted RBP9.3□□□□□ -0.92
SMARCD1-210ENST00000551352 GPRC5DQ9NZD1 345 aa9.3□□□□□ -0.92
SMARCD1-210ENST00000551352 PTPRCP08575 1304 aa9.3□□□□□ -0.92
SMARCD1-210ENST00000551352 WDR33Q9C0J8 1336 aaKnown RBP9.3□□□□□ -0.92
SMARCD1-210ENST00000551352 RTL9Q8NET4 1388 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 ATP5J2-PTCD1G3V325 749 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 EGFRP00533 1210 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 IGHDP01880 384 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 KIAA2012Q0VF49 1180 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 GRAPQ13588 217 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 DEFB115Q30KQ5 88 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 NIM1KQ8IY84 436 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 GRAPLQ8TC17 118 aaPredicted RBP9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 GLIS2Q9BZE0 524 aaPredicted RBP9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 KCNQ5Q9NR82 932 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 ZBTB40Q9NUA8 1239 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 PGAP2Q9UHJ9 254 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 TRMT112Q9UI30 125 aaKnown RBP9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 AKAP11Q9UKA4 1901 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 SH3TC1Q8TE82 1336 aa9.29□□□□□ -0.92
SMARCD1-210ENST00000551352 RAD17O75943 681 aa9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 SLC4A2P04920 1241 aa9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 HOXB7P09629 217 aa9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 LBX1P52954 281 aa9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 HDGFL1Q5TGJ6 251 aa9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 CCDC30Q5VVM6 783 aa9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 CYP4F22Q6NT55 531 aa9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 USP50Q70EL3 339 aaPredicted RBP9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 FAM89AQ96GI7 184 aa9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 STK31Q9BXU1 1019 aa9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 CHMP4BQ9H444 224 aaKnown RBP9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 PHAXQ9H814 394 aaKnown RBP9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 PRDM10Q9NQV6 1147 aa9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 ZNRF3Q9ULT6 936 aa9.28□□□□□ -0.92
SMARCD1-210ENST00000551352 AOC2O75106 756 aa9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 BBOX1O75936 387 aa9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 LMOD1P29536 600 aaPredicted RBP9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 GPSM2P81274 684 aa9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 SF3B3Q15393 1217 aaKnown RBP9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 GRIPAP1Q4V328 841 aa9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 HSP90AB3PQ58FF7 597 aa9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 RTL5Q5HYW3 569 aaPredicted RBP9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 INTS3Q68E01 1043 aaKnown RBP9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 DPP8Q6V1X1 898 aaPredicted RBP9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 MPNDQ8N594 471 aa9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 PLBD2Q8NHP8 589 aa9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 CAPNS2Q96L46 248 aa9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 ZIC5Q96T25 663 aa9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 RWDD1Q9H446 243 aaPredicted RBP9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 ADARB2Q9NS39 739 aaKnown RBP9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 POLLQ9UGP5 575 aa9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 TLL2Q9Y6L7 1015 aa9.27□□□□□ -0.93
SMARCD1-210ENST00000551352 ECM29Q5VYK3 1845 aa9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 WTIPA6NIX2 430 aaPredicted RBP9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 ZBTB7BO15156 539 aaPredicted RBP9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 CTCFP49711 727 aaPredicted RBP9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 HDAC1Q13547 482 aaPredicted RBP9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 CIAPIN1Q6FI81 312 aa9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 ANKRD13DQ6ZTN6 518 aa9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 DDX46Q7L014 1031 aaKnown RBP9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 G2E3Q7L622 706 aa9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 SKAP1Q86WV1 359 aa9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 JARID2Q92833 1246 aaPredicted RBP9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 CHMP4AQ9BY43 222 aa9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 VPS33BQ9H267 617 aa9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 SEC31BQ9NQW1 1179 aa9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 ABT1Q9ULW3 272 aaKnown RBP9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 ZBTB12Q9Y330 459 aaPredicted RBP9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 LAMB1P07942 1786 aa9.26□□□□□ -0.93
SMARCD1-210ENST00000551352 PSMD14O00487 310 aa9.25□□□□□ -0.93
SMARCD1-210ENST00000551352 SAPCD2Q86UD0 394 aa9.25□□□□□ -0.93
SMARCD1-210ENST00000551352 SUPT20HQ8NEM7 779 aa9.25□□□□□ -0.93
SMARCD1-210ENST00000551352 DBNDD1Q9H9R9 158 aa9.25□□□□□ -0.93
SMARCD1-210ENST00000551352 DBF4Q9UBU7 674 aaPredicted RBP9.25□□□□□ -0.93
SMARCD1-210ENST00000551352 TSKSQ9UJT2 592 aa9.25□□□□□ -0.93
SMARCD1-210ENST00000551352 RBM19Q9Y4C8 960 aaKnown RBP9.25□□□□□ -0.93
SMARCD1-210ENST00000551352 ASTN2O75129 1339 aaPredicted RBP9.25□□□□□ -0.93
SMARCD1-210ENST00000551352 RIMBP2O15034 1052 aa9.24□□□□□ -0.93
SMARCD1-210ENST00000551352 FLIIQ13045 1269 aa9.24□□□□□ -0.93
SMARCD1-210ENST00000551352 TRIM28Q13263 835 aaKnown RBP9.24□□□□□ -0.93
SMARCD1-210ENST00000551352 SAMD7Q7Z3H4 446 aa9.24□□□□□ -0.93
SMARCD1-210ENST00000551352 MICALL2Q8IY33 904 aa9.24□□□□□ -0.93
SMARCD1-210ENST00000551352 CNOT7Q9UIV1 285 aaKnown RBP9.24□□□□□ -0.93
SMARCD1-210ENST00000551352 CDHR2Q9BYE9 1310 aa9.24□□□□□ -0.93
SMARCD1-210ENST00000551352 ZNF609O15014 1411 aa9.23□□□□□ -0.93
SMARCD1-210ENST00000551352 IRS4O14654 1257 aaPredicted RBP9.23□□□□□ -0.93
SMARCD1-210ENST00000551352 ECE2O60344 883 aa9.23□□□□□ -0.93
SMARCD1-210ENST00000551352 CELF2O95319 508 aaKnown RBP9.23□□□□□ -0.93
SMARCD1-210ENST00000551352 CCT4P50991 539 aaKnown RBP9.23□□□□□ -0.93
SMARCD1-210ENST00000551352 GRM1Q13255 1194 aa9.23□□□□□ -0.93
SMARCD1-210ENST00000551352 DOK7Q18PE1 504 aa9.23□□□□□ -0.93
SMARCD1-210ENST00000551352 TBC1D16Q8TBP0 767 aa9.23□□□□□ -0.93
SMARCD1-210ENST00000551352 MYD88Q99836 296 aa9.23□□□□□ -0.93
SMARCD1-210ENST00000551352 HYPKQ9NX55 129 aa9.23□□□□□ -0.93
SMARCD1-210ENST00000551352 ADM5C9JUS6 153 aa9.22□□□□□ -0.93
SMARCD1-210ENST00000551352 F6X3S4 739 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 1160.2 ms