RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 XDHP47989 1333 aa24.05■■□□□ 1.44
DDX54-208ENST00000551344 RIMBP2O15034 1052 aa24.04■■□□□ 1.44
DDX54-208ENST00000551344 FOXO4P98177 505 aa24.04■■□□□ 1.44
DDX54-208ENST00000551344 MINPP1Q9UNW1 487 aa24.04■■□□□ 1.44
DDX54-208ENST00000551344 MYH3P11055 1940 aa24.04■■□□□ 1.44
DDX54-208ENST00000551344 UFL1O94874 794 aa24.03■■□□□ 1.44
DDX54-208ENST00000551344 POTEIP0CG38 1075 aa24.03■■□□□ 1.44
DDX54-208ENST00000551344 POTEJP0CG39 1038 aa24.03■■□□□ 1.44
DDX54-208ENST00000551344 ATP2B4P23634 1241 aa24.03■■□□□ 1.44
DDX54-208ENST00000551344 SCNN1DP51172 638 aa24.03■■□□□ 1.44
DDX54-208ENST00000551344 BCL2L13Q9BXK5 485 aa24.03■■□□□ 1.44
DDX54-208ENST00000551344 SMC4Q9NTJ3 1288 aa24.03■■□□□ 1.44
DDX54-208ENST00000551344 YDJCA8MPS7 323 aa24.02■■□□□ 1.44
DDX54-208ENST00000551344 RAD17O75943 681 aa24.02■■□□□ 1.44
DDX54-208ENST00000551344 BRPF1P55201 1214 aaPredicted RBP24.02■■□□□ 1.44
DDX54-208ENST00000551344 FAM161AQ3B820 660 aa24.02■■□□□ 1.44
DDX54-208ENST00000551344 EAPPQ56P03 285 aaPredicted RBP24.02■■□□□ 1.44
DDX54-208ENST00000551344 MPHOSPH8Q99549 860 aa24.02■■□□□ 1.44
DDX54-208ENST00000551344 ANKRD18BA2A2Z9 1011 aa24.01■■□□□ 1.43
DDX54-208ENST00000551344 DBNDD1Q9H9R9 158 aa24.01■■□□□ 1.43
DDX54-208ENST00000551344 EPS15P42566 896 aa24■■□□□ 1.43
DDX54-208ENST00000551344 IFIT5Q13325 482 aaKnown RBP24■■□□□ 1.43
DDX54-208ENST00000551344 GPRC5DQ9NZD1 345 aa24■■□□□ 1.43
DDX54-208ENST00000551344 CLEC11AQ9Y240 323 aa24■■□□□ 1.43
DDX54-208ENST00000551344 UTYO14607 1347 aa24■■□□□ 1.43
DDX54-208ENST00000551344 LTBP1Q14766 1721 aa23.99■■□□□ 1.43
DDX54-208ENST00000551344 G3V3G9 751 aa23.99■■□□□ 1.43
DDX54-208ENST00000551344 DOK7Q18PE1 504 aa23.99■■□□□ 1.43
DDX54-208ENST00000551344 DCAF8Q5TAQ9 597 aa23.99■■□□□ 1.43
DDX54-208ENST00000551344 LMBR1LQ6UX01 489 aa23.99■■□□□ 1.43
DDX54-208ENST00000551344 GPR101Q96P66 508 aaPredicted RBP23.99■■□□□ 1.43
DDX54-208ENST00000551344 ANKRD2Q9GZV1 360 aa23.99■■□□□ 1.43
DDX54-208ENST00000551344 ECE2O60344 883 aa23.98■■□□□ 1.43
DDX54-208ENST00000551344 GMPSP49915 693 aaPredicted RBP23.98■■□□□ 1.43
DDX54-208ENST00000551344 HNRNPUQ00839 825 aaKnown RBP eCLIP23.98■■□□□ 1.43
DDX54-208ENST00000551344 EPHA10Q5JZY3 1008 aa23.98■■□□□ 1.43
DDX54-208ENST00000551344 USP50Q70EL3 339 aaPredicted RBP23.98■■□□□ 1.43
DDX54-208ENST00000551344 LEMD3Q9Y2U8 911 aa23.98■■□□□ 1.43
DDX54-208ENST00000551344 CHMP3Q9Y3E7 222 aa23.98■■□□□ 1.43
DDX54-208ENST00000551344 NBPF7P0C2Y1 421 aaPredicted RBP23.97■■□□□ 1.43
DDX54-208ENST00000551344 CCT4P50991 539 aaKnown RBP23.97■■□□□ 1.43
DDX54-208ENST00000551344 CCDC57Q2TAC2 916 aa23.97■■□□□ 1.43
DDX54-208ENST00000551344 ADARB2Q9NS39 739 aaKnown RBP23.97■■□□□ 1.43
DDX54-208ENST00000551344 RARSP54136 660 aaKnown RBP23.96■■□□□ 1.43
DDX54-208ENST00000551344 DNAJC5GQ8N7S2 189 aa23.96■■□□□ 1.43
DDX54-208ENST00000551344 DPF2Q92785 391 aa23.96■■□□□ 1.43
DDX54-208ENST00000551344 NOB1Q9ULX3 412 aaKnown RBP23.96■■□□□ 1.43
DDX54-208ENST00000551344 CEP350Q5VT06 3117 aa23.96■■□□□ 1.43
DDX54-208ENST00000551344 PSMD14O00487 310 aa23.95■■□□□ 1.42
DDX54-208ENST00000551344 SUCLG2Q96I99 432 aa23.95■■□□□ 1.42
DDX54-208ENST00000551344 ITGBL1O95965 494 aaPredicted RBP23.94■■□□□ 1.42
DDX54-208ENST00000551344 RPS12P25398 132 aaKnown RBP23.94■■□□□ 1.42
DDX54-208ENST00000551344 PODNQ7Z5L7 613 aa23.94■■□□□ 1.42
DDX54-208ENST00000551344 CNTROBQ8N137 903 aa23.94■■□□□ 1.42
DDX54-208ENST00000551344 KAZALD1Q96I82 304 aa23.94■■□□□ 1.42
DDX54-208ENST00000551344 USP44Q9H0E7 712 aa23.94■■□□□ 1.42
DDX54-208ENST00000551344 KCNQ5Q9NR82 932 aa23.94■■□□□ 1.42
DDX54-208ENST00000551344 CNOT7Q9UIV1 285 aaKnown RBP23.94■■□□□ 1.42
DDX54-208ENST00000551344 WTIPA6NIX2 430 aaPredicted RBP23.93■■□□□ 1.42
DDX54-208ENST00000551344 H7C1D1 291 aa23.93■■□□□ 1.42
DDX54-208ENST00000551344 VIL1P09327 827 aaKnown RBP23.93■■□□□ 1.42
DDX54-208ENST00000551344 CHRNDQ07001 517 aa23.93■■□□□ 1.42
DDX54-208ENST00000551344 API5Q9BZZ5 524 aaKnown RBP23.93■■□□□ 1.42
DDX54-208ENST00000551344 MED23Q9ULK4 1368 aa23.92■■□□□ 1.42
DDX54-208ENST00000551344 ZNF804BA4D1E1 1349 aa23.92■■□□□ 1.42
DDX54-208ENST00000551344 PASKQ96RG2 1323 aa23.92■■□□□ 1.42
DDX54-208ENST00000551344 HTRA3P83110 453 aa23.92■■□□□ 1.42
DDX54-208ENST00000551344 TAF7LQ5H9L4 462 aa23.92■■□□□ 1.42
DDX54-208ENST00000551344 ARHGAP45Q92619 1136 aa23.92■■□□□ 1.42
DDX54-208ENST00000551344 ZBTB12Q9Y330 459 aaPredicted RBP23.92■■□□□ 1.42
DDX54-208ENST00000551344 RABL6Q3YEC7 729 aaPredicted RBP23.91■■□□□ 1.42
DDX54-208ENST00000551344 MAP1SQ66K74 1059 aaPredicted RBP23.91■■□□□ 1.42
DDX54-208ENST00000551344 LDHAL6AQ6ZMR3 332 aa23.91■■□□□ 1.42
DDX54-208ENST00000551344 BICC1Q9H694 974 aaKnown RBP23.9■■□□□ 1.42
DDX54-208ENST00000551344 ADAMTSL1Q8N6G6 1762 aa23.9■■□□□ 1.42
DDX54-208ENST00000551344 KIF16BQ96L93 1317 aa23.89■■□□□ 1.42
DDX54-208ENST00000551344 KCNJ4P48050 445 aa23.89■■□□□ 1.41
DDX54-208ENST00000551344 MICALL2Q8IY33 904 aa23.89■■□□□ 1.41
DDX54-208ENST00000551344 ZC3H15Q8WU90 426 aaKnown RBP23.89■■□□□ 1.41
DDX54-208ENST00000551344 ZNF594Q96JF6 807 aaPredicted RBP23.89■■□□□ 1.41
DDX54-208ENST00000551344 COA1Q9GZY4 146 aa23.89■■□□□ 1.41
DDX54-208ENST00000551344 CREBZFQ9NS37 354 aa23.89■■□□□ 1.41
DDX54-208ENST00000551344 KLRG1Q96E93 195 aa23.88■■□□□ 1.41
DDX54-208ENST00000551344 CNNM1Q9NRU3 951 aa23.88■■□□□ 1.41
DDX54-208ENST00000551344 PGAP2Q9UHJ9 254 aa23.88■■□□□ 1.41
DDX54-208ENST00000551344 USP17L3A6NCW0 530 aa23.87■■□□□ 1.41
DDX54-208ENST00000551344 USP17L4A6NCW7 530 aa23.87■■□□□ 1.41
DDX54-208ENST00000551344 IPO8O15397 1037 aaKnown RBP23.87■■□□□ 1.41
DDX54-208ENST00000551344 USP17L1Q7RTZ2 530 aa23.87■■□□□ 1.41
DDX54-208ENST00000551344 TXNRD3Q86VQ6 643 aa23.87■■□□□ 1.41
DDX54-208ENST00000551344 AGBL3Q8NEM8 1001 aa23.87■■□□□ 1.41
DDX54-208ENST00000551344 SPEF2Q9C093 1822 aa23.87■■□□□ 1.41
DDX54-208ENST00000551344 TAF5LO75529 589 aa23.86■■□□□ 1.41
DDX54-208ENST00000551344 HIRAP54198 1017 aaPredicted RBP23.86■■□□□ 1.41
DDX54-208ENST00000551344 RSBN1LQ6PCB5 846 aaPredicted RBP23.86■■□□□ 1.41
DDX54-208ENST00000551344 C15orf52Q6ZUT6 534 aaKnown RBP23.86■■□□□ 1.41
DDX54-208ENST00000551344 ANKRD44Q8N8A2 993 aa23.86■■□□□ 1.41
DDX54-208ENST00000551344 HELBQ8NG08 1087 aaPredicted RBP23.86■■□□□ 1.41
DDX54-208ENST00000551344 ZBED9Q6R2W3 1325 aa23.85■■□□□ 1.41
DDX54-208ENST00000551344 SHTN1A0MZ66 631 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms