RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 IGHMBP2P38935 993 aaKnown RBP21.79■■□□□ 1.08
CHMP1A-208ENST00000550102 TAF1DQ9H5J8 278 aaPredicted RBP21.79■■□□□ 1.08
CHMP1A-208ENST00000550102 BSDC1Q9NW68 430 aaPredicted RBP21.79■■□□□ 1.08
CHMP1A-208ENST00000550102 GGA1Q9UJY5 639 aa21.79■■□□□ 1.08
CHMP1A-208ENST00000550102 FOXO4P98177 505 aa21.78■■□□□ 1.08
CHMP1A-208ENST00000550102 LMOD1P29536 600 aaPredicted RBP21.77■■□□□ 1.08
CHMP1A-208ENST00000550102 KIF16BQ96L93 1317 aa21.77■■□□□ 1.07
CHMP1A-208ENST00000550102 ANKRD18BA2A2Z9 1011 aa21.76■■□□□ 1.07
CHMP1A-208ENST00000550102 RIMBP2O15034 1052 aa21.76■■□□□ 1.07
CHMP1A-208ENST00000550102 EPHX2P34913 555 aa21.76■■□□□ 1.07
CHMP1A-208ENST00000550102 CXCL9Q07325 125 aa21.76■■□□□ 1.07
CHMP1A-208ENST00000550102 GPR101Q96P66 508 aaPredicted RBP21.76■■□□□ 1.07
CHMP1A-208ENST00000550102 MPHOSPH8Q99549 860 aa21.76■■□□□ 1.07
CHMP1A-208ENST00000550102 CHMP3Q9Y3E7 222 aa21.76■■□□□ 1.07
CHMP1A-208ENST00000550102 UTYO14607 1347 aa21.76■■□□□ 1.07
CHMP1A-208ENST00000550102 SCNN1DP51172 638 aa21.75■■□□□ 1.07
CHMP1A-208ENST00000550102 APLP1P51693 650 aa21.75■■□□□ 1.07
CHMP1A-208ENST00000550102 RARSP54136 660 aaKnown RBP21.75■■□□□ 1.07
CHMP1A-208ENST00000550102 BRPF1P55201 1214 aaPredicted RBP21.75■■□□□ 1.07
CHMP1A-208ENST00000550102 IFIT5Q13325 482 aaKnown RBP21.75■■□□□ 1.07
CHMP1A-208ENST00000550102 TNIP1Q15025 636 aa21.75■■□□□ 1.07
CHMP1A-208ENST00000550102 CIAPIN1Q6FI81 312 aa21.75■■□□□ 1.07
CHMP1A-208ENST00000550102 LDHDQ86WU2 507 aa21.75■■□□□ 1.07
CHMP1A-208ENST00000550102 MINPP1Q9UNW1 487 aa21.75■■□□□ 1.07
CHMP1A-208ENST00000550102 ZBED9Q6R2W3 1325 aa21.75■■□□□ 1.07
CHMP1A-208ENST00000550102 YDJCA8MPS7 323 aa21.74■■□□□ 1.07
CHMP1A-208ENST00000550102 ECE2O60344 883 aa21.74■■□□□ 1.07
CHMP1A-208ENST00000550102 RAD17O75943 681 aa21.74■■□□□ 1.07
CHMP1A-208ENST00000550102 ATP2B4P23634 1241 aa21.74■■□□□ 1.07
CHMP1A-208ENST00000550102 EPHA10Q5JZY3 1008 aa21.74■■□□□ 1.07
CHMP1A-208ENST00000550102 CHADLQ6NUI6 762 aa21.74■■□□□ 1.07
CHMP1A-208ENST00000550102 LMBR1LQ6UX01 489 aa21.74■■□□□ 1.07
CHMP1A-208ENST00000550102 PNMA8AQ86V59 439 aaPredicted RBP21.74■■□□□ 1.07
CHMP1A-208ENST00000550102 ZC3H12CQ9C0D7 883 aaKnown RBP21.74■■□□□ 1.07
CHMP1A-208ENST00000550102 DBNDD1Q9H9R9 158 aa21.74■■□□□ 1.07
CHMP1A-208ENST00000550102 NBPF7P0C2Y1 421 aaPredicted RBP21.73■■□□□ 1.07
CHMP1A-208ENST00000550102 POTEIP0CG38 1075 aa21.73■■□□□ 1.07
CHMP1A-208ENST00000550102 POTEJP0CG39 1038 aa21.73■■□□□ 1.07
CHMP1A-208ENST00000550102 EAPPQ56P03 285 aaPredicted RBP21.73■■□□□ 1.07
CHMP1A-208ENST00000550102 SUCLG2Q96I99 432 aa21.73■■□□□ 1.07
CHMP1A-208ENST00000550102 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
CHMP1A-208ENST00000550102 ZNF646O15015 1829 aaPredicted RBP21.73■■□□□ 1.07
CHMP1A-208ENST00000550102 MED23Q9ULK4 1368 aa21.73■■□□□ 1.07
CHMP1A-208ENST00000550102 CCDC57Q2TAC2 916 aa21.72■■□□□ 1.07
CHMP1A-208ENST00000550102 ANKRD2Q9GZV1 360 aa21.72■■□□□ 1.07
CHMP1A-208ENST00000550102 NOB1Q9ULX3 412 aaKnown RBP21.72■■□□□ 1.07
CHMP1A-208ENST00000550102 G3V3G9 751 aa21.71■■□□□ 1.07
CHMP1A-208ENST00000550102 GMPSP49915 693 aaPredicted RBP21.71■■□□□ 1.07
CHMP1A-208ENST00000550102 CCT4P50991 539 aaKnown RBP21.71■■□□□ 1.07
CHMP1A-208ENST00000550102 DOK7Q18PE1 504 aa21.71■■□□□ 1.07
CHMP1A-208ENST00000550102 TAF7LQ5H9L4 462 aa21.71■■□□□ 1.07
CHMP1A-208ENST00000550102 DCAF8Q5TAQ9 597 aa21.71■■□□□ 1.07
CHMP1A-208ENST00000550102 GPRC5DQ9NZD1 345 aa21.71■■□□□ 1.07
CHMP1A-208ENST00000550102 EPS15P42566 896 aa21.69■■□□□ 1.06
CHMP1A-208ENST00000550102 KAZALD1Q96I82 304 aa21.69■■□□□ 1.06
CHMP1A-208ENST00000550102 BICC1Q9H694 974 aaKnown RBP21.69■■□□□ 1.06
CHMP1A-208ENST00000550102 LEMD3Q9Y2U8 911 aa21.69■■□□□ 1.06
CHMP1A-208ENST00000550102 PSMD14O00487 310 aa21.68■■□□□ 1.06
CHMP1A-208ENST00000550102 RABL6Q3YEC7 729 aaPredicted RBP21.68■■□□□ 1.06
CHMP1A-208ENST00000550102 USP44Q9H0E7 712 aa21.68■■□□□ 1.06
CHMP1A-208ENST00000550102 ZNF609O15014 1411 aa21.68■■□□□ 1.06
CHMP1A-208ENST00000550102 ZNF804BA4D1E1 1349 aa21.67■■□□□ 1.06
CHMP1A-208ENST00000550102 KCNJ4P48050 445 aa21.67■■□□□ 1.06
CHMP1A-208ENST00000550102 CHRNDQ07001 517 aa21.67■■□□□ 1.06
CHMP1A-208ENST00000550102 USP50Q70EL3 339 aaPredicted RBP21.67■■□□□ 1.06
CHMP1A-208ENST00000550102 ARHGAP45Q92619 1136 aa21.67■■□□□ 1.06
CHMP1A-208ENST00000550102 ADARB2Q9NS39 739 aaKnown RBP21.67■■□□□ 1.06
CHMP1A-208ENST00000550102 CLEC11AQ9Y240 323 aa21.67■■□□□ 1.06
CHMP1A-208ENST00000550102 TRPM7Q96QT4 1865 aa21.66■■□□□ 1.06
CHMP1A-208ENST00000550102 RPS12P25398 132 aaKnown RBP21.66■■□□□ 1.06
CHMP1A-208ENST00000550102 WTIPA6NIX2 430 aaPredicted RBP21.65■■□□□ 1.06
CHMP1A-208ENST00000550102 IPO8O15397 1037 aaKnown RBP21.65■■□□□ 1.06
CHMP1A-208ENST00000550102 LDHAL6AQ6ZMR3 332 aa21.65■■□□□ 1.06
CHMP1A-208ENST00000550102 ANKRD44Q8N8A2 993 aa21.65■■□□□ 1.06
CHMP1A-208ENST00000550102 ZNF594Q96JF6 807 aaPredicted RBP21.65■■□□□ 1.06
CHMP1A-208ENST00000550102 CNNM1Q9NRU3 951 aa21.65■■□□□ 1.06
CHMP1A-208ENST00000550102 UBTFL1P0CB47 393 aaPredicted RBP21.64■■□□□ 1.05
CHMP1A-208ENST00000550102 DPF2Q92785 391 aa21.64■■□□□ 1.05
CHMP1A-208ENST00000550102 KCNQ5Q9NR82 932 aa21.64■■□□□ 1.05
CHMP1A-208ENST00000550102 ZBTB12Q9Y330 459 aaPredicted RBP21.64■■□□□ 1.05
CHMP1A-208ENST00000550102 PODNQ7Z5L7 613 aa21.63■■□□□ 1.05
CHMP1A-208ENST00000550102 MICALL2Q8IY33 904 aa21.63■■□□□ 1.05
CHMP1A-208ENST00000550102 CNOT7Q9UIV1 285 aaKnown RBP21.63■■□□□ 1.05
CHMP1A-208ENST00000550102 H7C1D1 291 aa21.62■■□□□ 1.05
CHMP1A-208ENST00000550102 BCAR3O75815 825 aa21.62■■□□□ 1.05
CHMP1A-208ENST00000550102 VIL1P09327 827 aaKnown RBP21.62■■□□□ 1.05
CHMP1A-208ENST00000550102 KLRK1P26718 216 aa21.62■■□□□ 1.05
CHMP1A-208ENST00000550102 MAP1SQ66K74 1059 aaPredicted RBP21.62■■□□□ 1.05
CHMP1A-208ENST00000550102 FRAT1Q92837 279 aaPredicted RBP21.62■■□□□ 1.05
CHMP1A-208ENST00000550102 COA1Q9GZY4 146 aa21.62■■□□□ 1.05
CHMP1A-208ENST00000550102 PASKQ96RG2 1323 aa21.61■■□□□ 1.05
CHMP1A-208ENST00000550102 ARAP2Q8WZ64 1704 aa21.61■■□□□ 1.05
CHMP1A-208ENST00000550102 TRIM27P14373 513 aa21.61■■□□□ 1.05
CHMP1A-208ENST00000550102 INTS3Q68E01 1043 aaKnown RBP21.61■■□□□ 1.05
CHMP1A-208ENST00000550102 ATF7IPQ6VMQ6 1270 aa21.61■■□□□ 1.05
CHMP1A-208ENST00000550102 HELBQ8NG08 1087 aaPredicted RBP21.61■■□□□ 1.05
CHMP1A-208ENST00000550102 HDAC5Q9UQL6 1122 aa21.61■■□□□ 1.05
CHMP1A-208ENST00000550102 USP17L3A6NCW0 530 aa21.6■■□□□ 1.05
CHMP1A-208ENST00000550102 USP17L4A6NCW7 530 aa21.6■■□□□ 1.05
CHMP1A-208ENST00000550102 TAF5LO75529 589 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms