RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 EAPPQ56P03 285 aaPredicted RBP13.31□□□□□ -0.28
CCDC38-207ENST00000549752 CELF1Q92879 486 aaKnown RBP13.31□□□□□ -0.28
CCDC38-207ENST00000549752 ZNF428Q96B54 188 aa13.31□□□□□ -0.28
CCDC38-207ENST00000549752 NSFL1CQ9UNZ2 370 aaKnown RBP13.31□□□□□ -0.28
CCDC38-207ENST00000549752 DUOX1Q9NRD9 1551 aa13.3□□□□□ -0.28
CCDC38-207ENST00000549752 NEURL1BA8MQ27 555 aa13.3□□□□□ -0.28
CCDC38-207ENST00000549752 RIOK3O14730 519 aaKnown RBP13.3□□□□□ -0.28
CCDC38-207ENST00000549752 NUBP1P53384 320 aa13.3□□□□□ -0.28
CCDC38-207ENST00000549752 WASHC4Q2M389 1173 aa13.3□□□□□ -0.28
CCDC38-207ENST00000549752 DNAJC5GQ8N7S2 189 aa13.3□□□□□ -0.28
CCDC38-207ENST00000549752 KLRG1Q96E93 195 aa13.3□□□□□ -0.28
CCDC38-207ENST00000549752 CDC5LQ99459 802 aaKnown RBP13.3□□□□□ -0.28
CCDC38-207ENST00000549752 C6orf229H3BNL8 230 aa13.29□□□□□ -0.28
CCDC38-207ENST00000549752 IGKV5-2P06315 115 aa13.29□□□□□ -0.28
CCDC38-207ENST00000549752 CIAPIN1Q6FI81 312 aa13.29□□□□□ -0.28
CCDC38-207ENST00000549752 ANKRD18AQ8IVF6 992 aa13.29□□□□□ -0.28
CCDC38-207ENST00000549752 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
CCDC38-207ENST00000549752 G3V3G9 751 aa13.28□□□□□ -0.28
CCDC38-207ENST00000549752 CTSWP56202 376 aa13.28□□□□□ -0.28
CCDC38-207ENST00000549752 CXCL9Q07325 125 aa13.28□□□□□ -0.28
CCDC38-207ENST00000549752 USP50Q70EL3 339 aaPredicted RBP13.28□□□□□ -0.28
CCDC38-207ENST00000549752 G2E3Q7L622 706 aa13.28□□□□□ -0.28
CCDC38-207ENST00000549752 LINS1Q8NG48 757 aa13.28□□□□□ -0.28
CCDC38-207ENST00000549752 ZC3H12CQ9C0D7 883 aaKnown RBP13.28□□□□□ -0.28
CCDC38-207ENST00000549752 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
CCDC38-207ENST00000549752 PODXL2Q9NZ53 605 aa13.28□□□□□ -0.28
CCDC38-207ENST00000549752 ANKIB1Q9P2G1 1089 aa13.28□□□□□ -0.28
CCDC38-207ENST00000549752 RTL9Q8NET4 1388 aa13.28□□□□□ -0.28
CCDC38-207ENST00000549752 SCN9AQ15858 1988 aa13.27□□□□□ -0.28
CCDC38-207ENST00000549752 SCNN1DP51172 638 aa13.27□□□□□ -0.29
CCDC38-207ENST00000549752 CWF19L2Q2TBE0 894 aaKnown RBP13.27□□□□□ -0.29
CCDC38-207ENST00000549752 UBE3BQ7Z3V4 1068 aa13.27□□□□□ -0.29
CCDC38-207ENST00000549752 BCL2L13Q9BXK5 485 aa13.27□□□□□ -0.29
CCDC38-207ENST00000549752 ADARB2Q9NS39 739 aaKnown RBP13.27□□□□□ -0.29
CCDC38-207ENST00000549752 GGA1Q9UJY5 639 aa13.27□□□□□ -0.29
CCDC38-207ENST00000549752 H7C1W4 665 aa13.26□□□□□ -0.29
CCDC38-207ENST00000549752 POTEIP0CG38 1075 aa13.26□□□□□ -0.29
CCDC38-207ENST00000549752 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
CCDC38-207ENST00000549752 GPSM2P81274 684 aa13.26□□□□□ -0.29
CCDC38-207ENST00000549752 GCKRQ14397 625 aa13.26□□□□□ -0.29
CCDC38-207ENST00000549752 TTLL11Q8NHH1 800 aa13.26□□□□□ -0.29
CCDC38-207ENST00000549752 TBC1D16Q8TBP0 767 aa13.26□□□□□ -0.29
CCDC38-207ENST00000549752 PLA2G12BQ9BX93 195 aa13.26□□□□□ -0.29
CCDC38-207ENST00000549752 SEC31BQ9NQW1 1179 aa13.26□□□□□ -0.29
CCDC38-207ENST00000549752 GPRC5DQ9NZD1 345 aa13.26□□□□□ -0.29
CCDC38-207ENST00000549752 COL4A1P02462 1669 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 PCNTO95613 3336 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 XDHP47989 1333 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 ZNF521Q96K83 1311 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 PASKQ96RG2 1323 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 E9PSI1 815 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 CCER2I3L3R5 266 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 RAD17O75943 681 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 UFL1O94874 794 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
CCDC38-207ENST00000549752 HTRA3P83110 453 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 SLC51AQ86UW1 340 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 CNTROBQ8N137 903 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 JMYQ8N9B5 988 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 JARID2Q92833 1246 aaPredicted RBP13.25□□□□□ -0.29
CCDC38-207ENST00000549752 A0A1B0GUL6 1792 aa13.25□□□□□ -0.29
CCDC38-207ENST00000549752 TMEM88BA6NKF7 163 aa13.24□□□□□ -0.29
CCDC38-207ENST00000549752 H7C1D1 291 aa13.24□□□□□ -0.29
CCDC38-207ENST00000549752 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
CCDC38-207ENST00000549752 ITGBL1O95965 494 aaPredicted RBP13.24□□□□□ -0.29
CCDC38-207ENST00000549752 ATP2B4P23634 1241 aa13.24□□□□□ -0.29
CCDC38-207ENST00000549752 RPS12P25398 132 aaKnown RBP13.24□□□□□ -0.29
CCDC38-207ENST00000549752 EPS15P42566 896 aa13.24□□□□□ -0.29
CCDC38-207ENST00000549752 CCDC85AQ96PX6 553 aaPredicted RBP13.24□□□□□ -0.29
CCDC38-207ENST00000549752 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
CCDC38-207ENST00000549752 POLLQ9UGP5 575 aa13.24□□□□□ -0.29
CCDC38-207ENST00000549752 ECE2O60344 883 aa13.23□□□□□ -0.29
CCDC38-207ENST00000549752 GMPSP49915 693 aaPredicted RBP13.23□□□□□ -0.29
CCDC38-207ENST00000549752 NBR1Q14596 966 aa13.23□□□□□ -0.29
CCDC38-207ENST00000549752 ZC3H15Q8WU90 426 aaKnown RBP13.23□□□□□ -0.29
CCDC38-207ENST00000549752 DPF2Q92785 391 aa13.23□□□□□ -0.29
CCDC38-207ENST00000549752 MPHOSPH8Q99549 860 aa13.23□□□□□ -0.29
CCDC38-207ENST00000549752 GREM2Q9H772 168 aa13.23□□□□□ -0.29
CCDC38-207ENST00000549752 DBNDD1Q9H9R9 158 aa13.23□□□□□ -0.29
CCDC38-207ENST00000549752 RYDENQ9NUL5 291 aaKnown RBP13.23□□□□□ -0.29
CCDC38-207ENST00000549752 YDJCA8MPS7 323 aa13.22□□□□□ -0.29
CCDC38-207ENST00000549752 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
CCDC38-207ENST00000549752 MAP1SQ66K74 1059 aaPredicted RBP13.22□□□□□ -0.29
CCDC38-207ENST00000549752 CNOT7Q9UIV1 285 aaKnown RBP13.22□□□□□ -0.29
CCDC38-207ENST00000549752 ANKRD18BA2A2Z9 1011 aa13.21□□□□□ -0.29
CCDC38-207ENST00000549752 PSMD14O00487 310 aa13.21□□□□□ -0.29
CCDC38-207ENST00000549752 BEND3Q5T5X7 828 aa13.21□□□□□ -0.29
CCDC38-207ENST00000549752 RNF25Q96BH1 459 aaPredicted RBP13.21□□□□□ -0.29
CCDC38-207ENST00000549752 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
CCDC38-207ENST00000549752 C9orf78Q9NZ63 289 aaPredicted RBP13.21□□□□□ -0.29
CCDC38-207ENST00000549752 LEMD3Q9Y2U8 911 aa13.21□□□□□ -0.29
CCDC38-207ENST00000549752 PTPRCP08575 1304 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 F6X3S4 739 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 GRM8O00222 908 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 CSF1RP07333 972 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 CHRM1P11229 460 aaPredicted RBP13.2□□□□□ -0.3
CCDC38-207ENST00000549752 ITGA6P23229 1130 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 CASP7P55210 303 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 IFIT5Q13325 482 aaKnown RBP13.2□□□□□ -0.3
CCDC38-207ENST00000549752 DOK7Q18PE1 504 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms