RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 MPHOSPH8Q99549 860 aa22.15■■□□□ 1.14
RAPGEF3-220ENST00000549347 VPS33BQ9H267 617 aa22.15■■□□□ 1.14
RAPGEF3-220ENST00000549347 MINPP1Q9UNW1 487 aa22.15■■□□□ 1.14
RAPGEF3-220ENST00000549347 XDHP47989 1333 aa22.14■■□□□ 1.14
RAPGEF3-220ENST00000549347 PDE3AQ14432 1141 aa22.14■■□□□ 1.13
RAPGEF3-220ENST00000549347 MVPQ14764 893 aaKnown RBP22.14■■□□□ 1.13
RAPGEF3-220ENST00000549347 TAF7LQ5H9L4 462 aa22.14■■□□□ 1.13
RAPGEF3-220ENST00000549347 NSFL1CQ9UNZ2 370 aaKnown RBP22.14■■□□□ 1.13
RAPGEF3-220ENST00000549347 ZBTB7BO15156 539 aaPredicted RBP22.13■■□□□ 1.13
RAPGEF3-220ENST00000549347 GNAI2P04899 355 aa22.13■■□□□ 1.13
RAPGEF3-220ENST00000549347 MTX1Q13505 466 aa22.13■■□□□ 1.13
RAPGEF3-220ENST00000549347 RFX5P48382 616 aaPredicted RBP22.12■■□□□ 1.13
RAPGEF3-220ENST00000549347 TBC1D16Q8TBP0 767 aa22.12■■□□□ 1.13
RAPGEF3-220ENST00000549347 ZNF594Q96JF6 807 aaPredicted RBP22.12■■□□□ 1.13
RAPGEF3-220ENST00000549347 POLLQ9UGP5 575 aa22.12■■□□□ 1.13
RAPGEF3-220ENST00000549347 RRP1P56182 461 aaKnown RBP22.11■■□□□ 1.13
RAPGEF3-220ENST00000549347 KIAA2012Q0VF49 1180 aa22.11■■□□□ 1.13
RAPGEF3-220ENST00000549347 LDHAL6AQ6ZMR3 332 aa22.11■■□□□ 1.13
RAPGEF3-220ENST00000549347 ANKIB1Q9P2G1 1089 aa22.11■■□□□ 1.13
RAPGEF3-220ENST00000549347 GGA1Q9UJY5 639 aa22.11■■□□□ 1.13
RAPGEF3-220ENST00000549347 PPIP5K2O43314 1243 aa22.1■■□□□ 1.13
RAPGEF3-220ENST00000549347 UFL1O94874 794 aa22.1■■□□□ 1.13
RAPGEF3-220ENST00000549347 CHRNDQ07001 517 aa22.1■■□□□ 1.13
RAPGEF3-220ENST00000549347 AOC3Q16853 763 aa22.1■■□□□ 1.13
RAPGEF3-220ENST00000549347 C20orf194Q5TEA3 1177 aa22.1■■□□□ 1.13
RAPGEF3-220ENST00000549347 ANKRD2Q9GZV1 360 aa22.1■■□□□ 1.13
RAPGEF3-220ENST00000549347 DDX19BQ9UMR2 479 aa22.1■■□□□ 1.13
RAPGEF3-220ENST00000549347 COG6Q9Y2V7 657 aa22.1■■□□□ 1.13
RAPGEF3-220ENST00000549347 ATP2B4P23634 1241 aa22.09■■□□□ 1.13
RAPGEF3-220ENST00000549347 LARGE2Q8N3Y3 721 aa22.09■■□□□ 1.13
RAPGEF3-220ENST00000549347 EYA3Q99504 573 aa22.09■■□□□ 1.13
RAPGEF3-220ENST00000549347 CNNM1Q9NRU3 951 aa22.09■■□□□ 1.13
RAPGEF3-220ENST00000549347 C6orf229H3BNL8 230 aa22.08■■□□□ 1.13
RAPGEF3-220ENST00000549347 PTPN12Q05209 780 aaKnown RBP22.08■■□□□ 1.13
RAPGEF3-220ENST00000549347 MED23Q9ULK4 1368 aa22.08■■□□□ 1.12
RAPGEF3-220ENST00000549347 WDR90Q96KV7 1748 aa22.07■■□□□ 1.12
RAPGEF3-220ENST00000549347 WASHC4Q2M389 1173 aa22.07■■□□□ 1.12
RAPGEF3-220ENST00000549347 KLHDC4Q8TBB5 520 aa22.07■■□□□ 1.12
RAPGEF3-220ENST00000549347 JDP2Q8WYK2 163 aa22.07■■□□□ 1.12
RAPGEF3-220ENST00000549347 PUS3Q9BZE2 481 aaKnown RBP22.07■■□□□ 1.12
RAPGEF3-220ENST00000549347 LEMD3Q9Y2U8 911 aa22.07■■□□□ 1.12
RAPGEF3-220ENST00000549347 RIPOR2Q9Y4F9 1068 aa22.07■■□□□ 1.12
RAPGEF3-220ENST00000549347 PSME4Q14997 1843 aa22.07■■□□□ 1.12
RAPGEF3-220ENST00000549347 FZD9O00144 591 aa22.06■■□□□ 1.12
RAPGEF3-220ENST00000549347 SRGAP3O43295 1099 aa22.06■■□□□ 1.12
RAPGEF3-220ENST00000549347 NIM1KQ8IY84 436 aa22.06■■□□□ 1.12
RAPGEF3-220ENST00000549347 ZNF784Q8NCA9 323 aaPredicted RBP22.06■■□□□ 1.12
RAPGEF3-220ENST00000549347 FBXO3Q9UK99 471 aa22.06■■□□□ 1.12
RAPGEF3-220ENST00000549347 MROH5Q6ZUA9 1318 aa22.06■■□□□ 1.12
RAPGEF3-220ENST00000549347 LRRC24Q50LG9 513 aa22.05■■□□□ 1.12
RAPGEF3-220ENST00000549347 GPR101Q96P66 508 aaPredicted RBP22.05■■□□□ 1.12
RAPGEF3-220ENST00000549347 CHMP4BQ9H444 224 aaKnown RBP22.05■■□□□ 1.12
RAPGEF3-220ENST00000549347 C1orf115Q9H7X2 142 aa22.05■■□□□ 1.12
RAPGEF3-220ENST00000549347 COPRSQ9NQ92 184 aa22.05■■□□□ 1.12
RAPGEF3-220ENST00000549347 ZNF804BA4D1E1 1349 aa22.05■■□□□ 1.12
RAPGEF3-220ENST00000549347 ZNF541Q9H0D2 1346 aa22.05■■□□□ 1.12
RAPGEF3-220ENST00000549347 PNMA6EA0A0J9YXQ4 647 aa22.04■■□□□ 1.12
RAPGEF3-220ENST00000549347 GLTPD2A6NH11 291 aa22.04■■□□□ 1.12
RAPGEF3-220ENST00000549347 EYA2O00167 538 aa22.04■■□□□ 1.12
RAPGEF3-220ENST00000549347 CIAO1O76071 339 aa22.04■■□□□ 1.12
RAPGEF3-220ENST00000549347 ZBTB40Q9NUA8 1239 aa22.04■■□□□ 1.12
RAPGEF3-220ENST00000549347 ZNF646O15015 1829 aaPredicted RBP22.03■■□□□ 1.12
RAPGEF3-220ENST00000549347 WTIPA6NIX2 430 aaPredicted RBP22.03■■□□□ 1.12
RAPGEF3-220ENST00000549347 VGLL2Q8N8G2 317 aa22.03■■□□□ 1.12
RAPGEF3-220ENST00000549347 ZC3H12CQ9C0D7 883 aaKnown RBP22.03■■□□□ 1.12
RAPGEF3-220ENST00000549347 SCN9AQ15858 1988 aa22.03■■□□□ 1.12
RAPGEF3-220ENST00000549347 KDM2BQ8NHM5 1336 aa22.03■■□□□ 1.12
RAPGEF3-220ENST00000549347 IRS2Q9Y4H2 1338 aa22.03■■□□□ 1.12
RAPGEF3-220ENST00000549347 RIMBP2O15034 1052 aa22.02■■□□□ 1.12
RAPGEF3-220ENST00000549347 TAF5LO75529 589 aa22.02■■□□□ 1.12
RAPGEF3-220ENST00000549347 HELBQ8NG08 1087 aaPredicted RBP22.02■■□□□ 1.12
RAPGEF3-220ENST00000549347 ZNRF3Q9ULT6 936 aa22.02■■□□□ 1.12
RAPGEF3-220ENST00000549347 ARAP2Q8WZ64 1704 aa22.02■■□□□ 1.12
RAPGEF3-220ENST00000549347 KCNJ4P48050 445 aa22.01■■□□□ 1.11
RAPGEF3-220ENST00000549347 ATP8B2P98198 1209 aa22.01■■□□□ 1.11
RAPGEF3-220ENST00000549347 POLA2Q14181 598 aa22.01■■□□□ 1.11
RAPGEF3-220ENST00000549347 METTL24Q5JXM2 366 aa22.01■■□□□ 1.11
RAPGEF3-220ENST00000549347 CEP85Q6P2H3 762 aa22.01■■□□□ 1.11
RAPGEF3-220ENST00000549347 C15orf52Q6ZUT6 534 aaKnown RBP22.01■■□□□ 1.11
RAPGEF3-220ENST00000549347 ATG9AQ7Z3C6 839 aa22.01■■□□□ 1.11
RAPGEF3-220ENST00000549347 SSH3Q8TE77 659 aa22.01■■□□□ 1.11
RAPGEF3-220ENST00000549347 PA2G4Q9UQ80 394 aaKnown RBP22.01■■□□□ 1.11
RAPGEF3-220ENST00000549347 YDJCA8MPS7 323 aa22■■□□□ 1.11
RAPGEF3-220ENST00000549347 EIF6P56537 245 aaKnown RBP22■■□□□ 1.11
RAPGEF3-220ENST00000549347 DPY19L2Q6NUT2 758 aa22■■□□□ 1.11
RAPGEF3-220ENST00000549347 SIL1Q9H173 461 aa22■■□□□ 1.11
RAPGEF3-220ENST00000549347 DBNDD1Q9H9R9 158 aa22■■□□□ 1.11
RAPGEF3-220ENST00000549347 SCN4AP35499 1836 aa22■■□□□ 1.11
RAPGEF3-220ENST00000549347 ECE2O60344 883 aa21.99■■□□□ 1.11
RAPGEF3-220ENST00000549347 PDE8BO95263 885 aa21.99■■□□□ 1.11
RAPGEF3-220ENST00000549347 KLRK1P26718 216 aa21.99■■□□□ 1.11
RAPGEF3-220ENST00000549347 UBE4AQ14139 1066 aa21.99■■□□□ 1.11
RAPGEF3-220ENST00000549347 ZNF526Q8TF50 670 aaPredicted RBP21.99■■□□□ 1.11
RAPGEF3-220ENST00000549347 GPBP1L1Q9HC44 474 aaPredicted RBP21.99■■□□□ 1.11
RAPGEF3-220ENST00000549347 SNAP23O00161 211 aa21.98■■□□□ 1.11
RAPGEF3-220ENST00000549347 IL15P40933 162 aaPredicted RBP21.98■■□□□ 1.11
RAPGEF3-220ENST00000549347 TXNRD3Q86VQ6 643 aa21.98■■□□□ 1.11
RAPGEF3-220ENST00000549347 GPC2Q8N158 579 aa21.98■■□□□ 1.11
RAPGEF3-220ENST00000549347 DDNO94850 711 aaPredicted RBP21.97■■□□□ 1.11
RAPGEF3-220ENST00000549347 DOK7Q18PE1 504 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms