RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 YY1P25490 414 aa12.02□□□□□ -0.49
RAB5B-205ENST00000549034 GPSM2P81274 684 aa12.02□□□□□ -0.49
RAB5B-205ENST00000549034 ANKRD44Q8N8A2 993 aa12.02□□□□□ -0.49
RAB5B-205ENST00000549034 ZNF277Q9NRM2 450 aaPredicted RBP12.02□□□□□ -0.49
RAB5B-205ENST00000549034 ANKIB1Q9P2G1 1089 aa12.02□□□□□ -0.49
RAB5B-205ENST00000549034 MINPP1Q9UNW1 487 aa12.02□□□□□ -0.49
RAB5B-205ENST00000549034 COG6Q9Y2V7 657 aa12.02□□□□□ -0.49
RAB5B-205ENST00000549034 SBF1O95248 1867 aa12.02□□□□□ -0.49
RAB5B-205ENST00000549034 FER1L6Q2WGJ9 1857 aa12.02□□□□□ -0.49
RAB5B-205ENST00000549034 C6orf229H3BNL8 230 aa12.01□□□□□ -0.49
RAB5B-205ENST00000549034 GNAI2P04899 355 aa12.01□□□□□ -0.49
RAB5B-205ENST00000549034 PRELPP51888 382 aa12.01□□□□□ -0.49
RAB5B-205ENST00000549034 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
RAB5B-205ENST00000549034 PDE3AQ14432 1141 aa12.01□□□□□ -0.49
RAB5B-205ENST00000549034 RABL6Q3YEC7 729 aaPredicted RBP12.01□□□□□ -0.49
RAB5B-205ENST00000549034 C20orf194Q5TEA3 1177 aa12.01□□□□□ -0.49
RAB5B-205ENST00000549034 LDHAL6AQ6ZMR3 332 aa12.01□□□□□ -0.49
RAB5B-205ENST00000549034 SUPT20HQ8NEM7 779 aa12.01□□□□□ -0.49
RAB5B-205ENST00000549034 PSMD1Q99460 953 aa12.01□□□□□ -0.49
RAB5B-205ENST00000549034 RTL9Q8NET4 1388 aa12.01□□□□□ -0.49
RAB5B-205ENST00000549034 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
RAB5B-205ENST00000549034 MVPQ14764 893 aaKnown RBP12□□□□□ -0.49
RAB5B-205ENST00000549034 CNNM1Q9NRU3 951 aa12□□□□□ -0.49
RAB5B-205ENST00000549034 RIMBP2O15034 1052 aa11.99□□□□□ -0.49
RAB5B-205ENST00000549034 ATP2B4P23634 1241 aa11.99□□□□□ -0.49
RAB5B-205ENST00000549034 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
RAB5B-205ENST00000549034 KLHDC4Q8TBB5 520 aa11.99□□□□□ -0.49
RAB5B-205ENST00000549034 PUS3Q9BZE2 481 aaKnown RBP11.99□□□□□ -0.49
RAB5B-205ENST00000549034 ANKRD2Q9GZV1 360 aa11.99□□□□□ -0.49
RAB5B-205ENST00000549034 POLLQ9UGP5 575 aa11.99□□□□□ -0.49
RAB5B-205ENST00000549034 GGA1Q9UJY5 639 aa11.99□□□□□ -0.49
RAB5B-205ENST00000549034 DDX19BQ9UMR2 479 aa11.99□□□□□ -0.49
RAB5B-205ENST00000549034 LTBP3Q9NS15 1303 aa11.99□□□□□ -0.49
RAB5B-205ENST00000549034 COL4A1P02462 1669 aa11.99□□□□□ -0.49
RAB5B-205ENST00000549034 SPEF2Q9C093 1822 aa11.99□□□□□ -0.49
RAB5B-205ENST00000549034 G3V3G9 751 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 PPIP5K2O43314 1243 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 TAF5LO75529 589 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 RRP1P56182 461 aaKnown RBP11.98□□□□□ -0.49
RAB5B-205ENST00000549034 ATP8B2P98198 1209 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 CHRNDQ07001 517 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 AOC3Q16853 763 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 WASHC4Q2M389 1173 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 DCAF8Q5TAQ9 597 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 LARGE2Q8N3Y3 721 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 TBC1D16Q8TBP0 767 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 JDP2Q8WYK2 163 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 EYA3Q99504 573 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 RTFDC1Q9BY42 306 aaPredicted RBP11.98□□□□□ -0.49
RAB5B-205ENST00000549034 ZC3H12CQ9C0D7 883 aaKnown RBP11.98□□□□□ -0.49
RAB5B-205ENST00000549034 VPS33BQ9H267 617 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 CHMP4BQ9H444 224 aaKnown RBP11.98□□□□□ -0.49
RAB5B-205ENST00000549034 C1orf115Q9H7X2 142 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 PODXL2Q9NZ53 605 aa11.98□□□□□ -0.49
RAB5B-205ENST00000549034 SUPT16HQ9Y5B9 1047 aaKnown RBP11.98□□□□□ -0.49
RAB5B-205ENST00000549034 XDHP47989 1333 aa11.97□□□□□ -0.49
RAB5B-205ENST00000549034 SRGAP3O43295 1099 aa11.97□□□□□ -0.49
RAB5B-205ENST00000549034 UFL1O94874 794 aa11.97□□□□□ -0.49
RAB5B-205ENST00000549034 KCNJ4P48050 445 aa11.97□□□□□ -0.49
RAB5B-205ENST00000549034 RFX5P48382 616 aaPredicted RBP11.97□□□□□ -0.49
RAB5B-205ENST00000549034 LRRC24Q50LG9 513 aa11.97□□□□□ -0.49
RAB5B-205ENST00000549034 GPR101Q96P66 508 aaPredicted RBP11.97□□□□□ -0.49
RAB5B-205ENST00000549034 WTIPA6NIX2 430 aaPredicted RBP11.96□□□□□ -0.49
RAB5B-205ENST00000549034 PTPN12Q05209 780 aaKnown RBP11.96□□□□□ -0.49
RAB5B-205ENST00000549034 DOK7Q18PE1 504 aa11.96□□□□□ -0.49
RAB5B-205ENST00000549034 DPY19L2Q6NUT2 758 aa11.96□□□□□ -0.49
RAB5B-205ENST00000549034 ZNF526Q8TF50 670 aaPredicted RBP11.96□□□□□ -0.49
RAB5B-205ENST00000549034 SIL1Q9H173 461 aa11.96□□□□□ -0.49
RAB5B-205ENST00000549034 LEMD3Q9Y2U8 911 aa11.96□□□□□ -0.49
RAB5B-205ENST00000549034 RIPOR2Q9Y4F9 1068 aa11.96□□□□□ -0.49
RAB5B-205ENST00000549034 DICER1Q9UPY3 1922 aaKnown RBP11.96□□□□□ -0.5
RAB5B-205ENST00000549034 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
RAB5B-205ENST00000549034 PNMA6EA0A0J9YXQ4 647 aa11.95□□□□□ -0.5
RAB5B-205ENST00000549034 EYA2O00167 538 aa11.95□□□□□ -0.5
RAB5B-205ENST00000549034 EIF6P56537 245 aaKnown RBP11.95□□□□□ -0.5
RAB5B-205ENST00000549034 KIAA2012Q0VF49 1180 aa11.95□□□□□ -0.5
RAB5B-205ENST00000549034 METTL24Q5JXM2 366 aa11.95□□□□□ -0.5
RAB5B-205ENST00000549034 NIM1KQ8IY84 436 aa11.95□□□□□ -0.5
RAB5B-205ENST00000549034 PA2G4Q9UQ80 394 aaKnown RBP11.95□□□□□ -0.5
RAB5B-205ENST00000549034 SNED1Q8TER0 1413 aa11.94□□□□□ -0.5
RAB5B-205ENST00000549034 MROH5Q6ZUA9 1318 aa11.94□□□□□ -0.5
RAB5B-205ENST00000549034 SNAP23O00161 211 aa11.94□□□□□ -0.5
RAB5B-205ENST00000549034 ZBTB40Q9NUA8 1239 aa11.94□□□□□ -0.5
RAB5B-205ENST00000549034 GOLGB1Q14789 3259 aaKnown RBP11.94□□□□□ -0.5
RAB5B-205ENST00000549034 DDNO94850 711 aaPredicted RBP11.93□□□□□ -0.5
RAB5B-205ENST00000549034 G3BP1Q13283 466 aaKnown RBP eCLIP11.93□□□□□ -0.5
RAB5B-205ENST00000549034 MTX1Q13505 466 aa11.93□□□□□ -0.5
RAB5B-205ENST00000549034 RPAP2Q8IXW5 612 aaPredicted RBP11.93□□□□□ -0.5
RAB5B-205ENST00000549034 DBNDD1Q9H9R9 158 aa11.93□□□□□ -0.5
RAB5B-205ENST00000549034 COPRSQ9NQ92 184 aa11.93□□□□□ -0.5
RAB5B-205ENST00000549034 CEP126Q9P2H0 1117 aa11.93□□□□□ -0.5
RAB5B-205ENST00000549034 ZNRF3Q9ULT6 936 aa11.93□□□□□ -0.5
RAB5B-205ENST00000549034 LRRC37AA6NMS7 1700 aa11.92□□□□□ -0.5
RAB5B-205ENST00000549034 GLTPD2A6NH11 291 aa11.92□□□□□ -0.5
RAB5B-205ENST00000549034 FZD9O00144 591 aa11.92□□□□□ -0.5
RAB5B-205ENST00000549034 SURF6O75683 361 aaKnown RBP11.92□□□□□ -0.5
RAB5B-205ENST00000549034 PDE8BO95263 885 aa11.92□□□□□ -0.5
RAB5B-205ENST00000549034 IL15P40933 162 aaPredicted RBP11.92□□□□□ -0.5
RAB5B-205ENST00000549034 CEP85Q6P2H3 762 aa11.92□□□□□ -0.5
RAB5B-205ENST00000549034 ATG9AQ7Z3C6 839 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms