RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 EAPPQ56P03 285 aaPredicted RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 RNF20Q5VTR2 975 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 TRAF7Q6Q0C0 670 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 TAS1R3Q7RTX0 852 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 WAPLQ7Z5K2 1190 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 ANKLE2Q86XL3 938 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 SMC5Q8IY18 1101 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 DZIP1LQ8IYY4 767 aaKnown RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 SIX5Q8N196 739 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 KCNH5Q8NCM2 988 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 GAS2L2Q8NHY3 880 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 GCC1Q96CN9 775 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 ASB16Q96NS5 453 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 CCDC85AQ96PX6 553 aaPredicted RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 SPSB2Q99619 263 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 OCSTAMPQ9BR26 566 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 SLC4A5Q9BY07 1137 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 SMC4Q9NTJ3 1288 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 DCTN4Q9UJW0 460 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 KIAA1024Q9UPX6 916 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 HPS5Q9UPZ3 1129 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 SALL2Q9Y467 1007 aaPredicted RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 PCDHB11Q9Y5F2 797 aa2.09□□□□□ -2.07
LGR5-205ENST00000549015 DNMT3AQ9Y6K1 912 aaPredicted RBP2.09□□□□□ -2.07
LGR5-205ENST00000549015 ABCC4O15439 1325 aa2.09□□□□□ -2.08
LGR5-205ENST00000549015 ACEP12821 1306 aa2.09□□□□□ -2.08
LGR5-205ENST00000549015 CRB1P82279 1406 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 PEAK1Q9H792 1746 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 N4BP2Q86UW6 1770 aaPredicted RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 CHD2O14647 1828 aaKnown RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 VIRMAQ69YN4 1812 aaKnown RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 ZBTB7BO15156 539 aaPredicted RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 EPB41L2O43491 1005 aaKnown RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 SMARCA5O60264 1052 aaPredicted RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 PTCD1O75127 700 aaKnown RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 BCAR3O75815 825 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 MYCP01106 439 aaPredicted RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 TRIM27P14373 513 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 VAMP1P23763 118 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 PBX2P40425 430 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 TNNT2P45379 298 aaPredicted RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 APLP1P51693 650 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 ARHGAP4P98171 946 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 XPCQ01831 940 aaPredicted RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 EXOSC9Q06265 439 aaKnown RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 SF3B2Q13435 895 aaKnown RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 EIF4A2Q14240 407 aaKnown RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 BECN1Q14457 450 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 SF3A1Q15459 793 aaKnown RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 NBPF20Q3BBV1 942 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 C8orf34Q49A92 452 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 NAALADL2Q58DX5 795 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 BMP2KLQ5H9B9 411 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 C20orf194Q5TEA3 1177 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 C9orf131Q5VYM1 1079 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 FBXO33Q7Z6M2 555 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 NME9Q86XW9 330 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.08□□□□□ -2.08
LGR5-205ENST00000549015 TSEN2Q8NCE0 465 aaKnown RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 ANKK1Q8NFD2 765 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 SSH1Q8WYL5 1049 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 VTI1AQ96AJ9 217 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 THAP11Q96EK4 314 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 SLC10A4Q96EP9 437 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 C8orf37Q96NL8 207 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 ZBTB40Q9NUA8 1239 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 EMILIN1Q9Y6C2 1016 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 USP19O94966 1318 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 MAP3K19Q56UN5 1328 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 LMO7Q8WWI1 1683 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 FAM208AQ9UK61 1670 aaKnown RBP2.08□□□□□ -2.08
LGR5-205ENST00000549015 ADAMTS7Q9UKP4 1686 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 CEMIPQ8WUJ3 1361 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 MAP3K5Q99683 1374 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 RGS12O14924 1447 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 ATP10DQ9P241 1426 aa2.08□□□□□ -2.08
LGR5-205ENST00000549015 POTEB2H3BUK9 544 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 CHL1O00533 1208 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 SCAMP3O14828 347 aaKnown RBP2.07□□□□□ -2.08
LGR5-205ENST00000549015 NDUFB5O43674 189 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 PLIN1O60240 522 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 HMMRO75330 724 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 VAMP4O75379 141 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 DXOO77932 396 aaKnown RBP2.07□□□□□ -2.08
LGR5-205ENST00000549015 DKK1O94907 266 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 FAM13AO94988 1023 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 RECKO95980 971 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 P4HBP07237 508 aaKnown RBP2.07□□□□□ -2.08
LGR5-205ENST00000549015 KCNA6P17658 529 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 MAPK8P45983 427 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 BCAMP50895 628 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 CCT4P50991 539 aaKnown RBP2.07□□□□□ -2.08
LGR5-205ENST00000549015 COPS2P61201 443 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 FKBP5Q13451 457 aaPredicted RBP2.07□□□□□ -2.08
LGR5-205ENST00000549015 TWISTNBQ3B726 338 aaPredicted RBP2.07□□□□□ -2.08
LGR5-205ENST00000549015 LINC01559Q495D7 138 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 AMOTQ4VCS5 1084 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 INTS3Q68E01 1043 aaKnown RBP2.07□□□□□ -2.08
LGR5-205ENST00000549015 POTEEQ6S8J3 1075 aa2.07□□□□□ -2.08
LGR5-205ENST00000549015 CAPN12Q6ZSI9 719 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms