RNA–Protein interactions for RNA: ENST00000549003.5

PFKM-214, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-214ENST00000549003 ZNF280AP59817 542 aaPredicted RBP13.23□□□□□ -0.29
PFKM-214ENST00000549003 GMLQ99445 158 aa13.23□□□□□ -0.29
PFKM-214ENST00000549003 CAP1Q01518 475 aa13.22□□□□□ -0.29
PFKM-214ENST00000549003 WASHC4Q2M389 1173 aa13.22□□□□□ -0.29
PFKM-214ENST00000549003 ANGEL2Q5VTE6 544 aaKnown RBP13.22□□□□□ -0.29
PFKM-214ENST00000549003 DDX46Q7L014 1031 aaKnown RBP13.22□□□□□ -0.29
PFKM-214ENST00000549003 TBC1D16Q8TBP0 767 aa13.22□□□□□ -0.29
PFKM-214ENST00000549003 PNISRQ8TF01 805 aaKnown RBP13.22□□□□□ -0.29
PFKM-214ENST00000549003 XAGE3Q8WTP9 111 aa13.22□□□□□ -0.29
PFKM-214ENST00000549003 DCPSQ96C86 337 aaKnown RBP13.22□□□□□ -0.29
PFKM-214ENST00000549003 CFAP53Q96M91 514 aa13.22□□□□□ -0.29
PFKM-214ENST00000549003 SH3TC1Q8TE82 1336 aa13.21□□□□□ -0.29
PFKM-214ENST00000549003 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
PFKM-214ENST00000549003 FXR1P51114 621 aaKnown RBP eCLIP13.21□□□□□ -0.29
PFKM-214ENST00000549003 TCIRG1Q13488 830 aa13.21□□□□□ -0.29
PFKM-214ENST00000549003 KRT24Q2M2I5 525 aa13.21□□□□□ -0.29
PFKM-214ENST00000549003 COPS6Q7L5N1 327 aa13.21□□□□□ -0.29
PFKM-214ENST00000549003 WTIPA6NIX2 430 aaPredicted RBP13.2□□□□□ -0.3
PFKM-214ENST00000549003 GPR25O00155 361 aa13.2□□□□□ -0.3
PFKM-214ENST00000549003 SCARF1Q14162 830 aa13.2□□□□□ -0.3
PFKM-214ENST00000549003 SF3B3Q15393 1217 aaKnown RBP13.2□□□□□ -0.3
PFKM-214ENST00000549003 NFE2L2Q16236 605 aa13.2□□□□□ -0.3
PFKM-214ENST00000549003 NOM1Q5C9Z4 860 aaKnown RBP13.2□□□□□ -0.3
PFKM-214ENST00000549003 FBXO46Q6PJ61 603 aaPredicted RBP13.2□□□□□ -0.3
PFKM-214ENST00000549003 TRMT112Q9UI30 125 aaKnown RBP13.2□□□□□ -0.3
PFKM-214ENST00000549003 NSFL1CQ9UNZ2 370 aaKnown RBP13.2□□□□□ -0.3
PFKM-214ENST00000549003 NUDCQ9Y266 331 aa13.2□□□□□ -0.3
PFKM-214ENST00000549003 SPEF2Q9C093 1822 aa13.2□□□□□ -0.3
PFKM-214ENST00000549003 LAMA3Q16787 3333 aa13.19□□□□□ -0.3
PFKM-214ENST00000549003 UBE2Q2LH0YL09 131 aa13.19□□□□□ -0.3
PFKM-214ENST00000549003 EIF2S2P20042 333 aaKnown RBP13.19□□□□□ -0.3
PFKM-214ENST00000549003 PRAMEF18Q5VWM3 479 aa13.19□□□□□ -0.3
PFKM-214ENST00000549003 TMC4Q7Z404 712 aa13.19□□□□□ -0.3
PFKM-214ENST00000549003 SULF1Q8IWU6 871 aa13.19□□□□□ -0.3
PFKM-214ENST00000549003 ISCA1Q9BUE6 129 aa13.19□□□□□ -0.3
PFKM-214ENST00000549003 CFHR5Q9BXR6 569 aa13.19□□□□□ -0.3
PFKM-214ENST00000549003 SSC5DA1L4H1 1573 aa13.19□□□□□ -0.3
PFKM-214ENST00000549003 COL6A3P12111 3177 aa13.18□□□□□ -0.3
PFKM-214ENST00000549003 TM4SF4P48230 202 aa13.18□□□□□ -0.3
PFKM-214ENST00000549003 PKN2Q16513 984 aaKnown RBP13.18□□□□□ -0.3
PFKM-214ENST00000549003 NECTIN2Q92692 538 aa13.18□□□□□ -0.3
PFKM-214ENST00000549003 TMX4Q9H1E5 349 aaPredicted RBP13.18□□□□□ -0.3
PFKM-214ENST00000549003 A0A0C4DFX4 3053 aa13.18□□□□□ -0.3
PFKM-214ENST00000549003 OTOFQ9HC10 1997 aa13.18□□□□□ -0.3
PFKM-214ENST00000549003 C6orf229H3BNL8 230 aa13.17□□□□□ -0.3
PFKM-214ENST00000549003 FKBP1BP68106 108 aa13.17□□□□□ -0.3
PFKM-214ENST00000549003 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
PFKM-214ENST00000549003 RSBN1LQ6PCB5 846 aaPredicted RBP13.17□□□□□ -0.3
PFKM-214ENST00000549003 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
PFKM-214ENST00000549003 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
PFKM-214ENST00000549003 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
PFKM-214ENST00000549003 PITPNM2Q9BZ72 1349 aa13.16□□□□□ -0.3
PFKM-214ENST00000549003 ZSWIM8A7E2V4 1837 aa13.16□□□□□ -0.3
PFKM-214ENST00000549003 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
PFKM-214ENST00000549003 NBPF9Q3BBW0 867 aa13.16□□□□□ -0.3
PFKM-214ENST00000549003 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
PFKM-214ENST00000549003 MXD3Q9BW11 206 aa13.16□□□□□ -0.3
PFKM-214ENST00000549003 TSPYL4Q9UJ04 414 aa13.16□□□□□ -0.3
PFKM-214ENST00000549003 ATP5J2-PTCD1G3V325 749 aa13.15□□□□□ -0.3
PFKM-214ENST00000549003 HSP90AB3PQ58FF7 597 aa13.15□□□□□ -0.3
PFKM-214ENST00000549003 AGBL3Q8NEM8 1001 aa13.15□□□□□ -0.3
PFKM-214ENST00000549003 MYOZ2Q9NPC6 264 aa13.15□□□□□ -0.3
PFKM-214ENST00000549003 HDAC9Q9UKV0 1011 aa13.15□□□□□ -0.3
PFKM-214ENST00000549003 ECM29Q5VYK3 1845 aa13.14□□□□□ -0.31
PFKM-214ENST00000549003 PTPN12Q05209 780 aaKnown RBP13.14□□□□□ -0.31
PFKM-214ENST00000549003 CHPF2Q9P2E5 772 aa13.14□□□□□ -0.31
PFKM-214ENST00000549003 FZD1Q9UP38 647 aa13.14□□□□□ -0.31
PFKM-214ENST00000549003 A0A1B0GUL6 1792 aa13.13□□□□□ -0.31
PFKM-214ENST00000549003 FKTNO75072 461 aa13.13□□□□□ -0.31
PFKM-214ENST00000549003 UFL1O94874 794 aa13.13□□□□□ -0.31
PFKM-214ENST00000549003 RPS8P62241 208 aaKnown RBP13.13□□□□□ -0.31
PFKM-214ENST00000549003 RTL5Q5HYW3 569 aaPredicted RBP13.13□□□□□ -0.31
PFKM-214ENST00000549003 OTOP1Q7RTM1 612 aa13.13□□□□□ -0.31
PFKM-214ENST00000549003 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
PFKM-214ENST00000549003 MYH3P11055 1940 aa13.12□□□□□ -0.31
PFKM-214ENST00000549003 IGF2BP3O00425 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
PFKM-214ENST00000549003 LDLRAD1Q5T700 205 aa13.12□□□□□ -0.31
PFKM-214ENST00000549003 ZBED3Q96IU2 234 aaPredicted RBP13.12□□□□□ -0.31
PFKM-214ENST00000549003 EYA3Q99504 573 aa13.12□□□□□ -0.31
PFKM-214ENST00000549003 WNT10BO00744 389 aa13.11□□□□□ -0.31
PFKM-214ENST00000549003 IRS4O14654 1257 aaPredicted RBP13.11□□□□□ -0.31
PFKM-214ENST00000549003 USP17L8P0C7I0 530 aa13.11□□□□□ -0.31
PFKM-214ENST00000549003 DACT2Q5SW24 774 aa13.11□□□□□ -0.31
PFKM-214ENST00000549003 PLBD2Q8NHP8 589 aa13.11□□□□□ -0.31
PFKM-214ENST00000549003 AOX1Q06278 1338 aa13.11□□□□□ -0.31
PFKM-214ENST00000549003 SASH1O94885 1247 aa13.1□□□□□ -0.31
PFKM-214ENST00000549003 EN2P19622 333 aaPredicted RBP13.1□□□□□ -0.31
PFKM-214ENST00000549003 TRIM28Q13263 835 aaKnown RBP13.1□□□□□ -0.31
PFKM-214ENST00000549003 SPRYD7Q5W111 196 aa13.1□□□□□ -0.31
PFKM-214ENST00000549003 ARMC5Q96C12 935 aa13.1□□□□□ -0.31
PFKM-214ENST00000549003 COLQQ9Y215 455 aaPredicted RBP13.1□□□□□ -0.31
PFKM-214ENST00000549003 GJA5P36382 358 aa13.09□□□□□ -0.31
PFKM-214ENST00000549003 TXNRD3Q86VQ6 643 aa13.09□□□□□ -0.31
PFKM-214ENST00000549003 CLMNQ96JQ2 1002 aa13.09□□□□□ -0.31
PFKM-214ENST00000549003 ZC3H12CQ9C0D7 883 aaKnown RBP13.09□□□□□ -0.31
PFKM-214ENST00000549003 BABAM1Q9NWV8 329 aa13.09□□□□□ -0.31
PFKM-214ENST00000549003 GGA1Q9UJY5 639 aa13.09□□□□□ -0.31
PFKM-214ENST00000549003 TRIM17Q9Y577 477 aa13.09□□□□□ -0.31
PFKM-214ENST00000549003 CHL1O00533 1208 aa13.08□□□□□ -0.32
PFKM-214ENST00000549003 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms