RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ZNF219Q9P2Y4 722 aaPredicted RBP26.22■■□□□ 1.79
CACNB3-210ENST00000548874 MINPP1Q9UNW1 487 aa26.22■■□□□ 1.79
CACNB3-210ENST00000548874 CIAO1O76071 339 aa26.21■■□□□ 1.79
CACNB3-210ENST00000548874 LRRC24Q50LG9 513 aa26.21■■□□□ 1.79
CACNB3-210ENST00000548874 ATG9AQ7Z3C6 839 aa26.21■■□□□ 1.79
CACNB3-210ENST00000548874 CNNM1Q9NRU3 951 aa26.21■■□□□ 1.79
CACNB3-210ENST00000548874 NOP58Q9Y2X3 529 aaKnown RBP26.21■■□□□ 1.79
CACNB3-210ENST00000548874 LTBP1Q14766 1721 aa26.2■■□□□ 1.79
CACNB3-210ENST00000548874 CCDC93Q567U6 631 aa26.2■■□□□ 1.78
CACNB3-210ENST00000548874 SIL1Q9H173 461 aa26.2■■□□□ 1.78
CACNB3-210ENST00000548874 GRIPAP1Q4V328 841 aa26.19■■□□□ 1.78
CACNB3-210ENST00000548874 A0A1B0GUL6 1792 aa26.19■■□□□ 1.78
CACNB3-210ENST00000548874 CHRNDQ07001 517 aa26.18■■□□□ 1.78
CACNB3-210ENST00000548874 PELP1Q8IZL8 1130 aaKnown RBP26.18■■□□□ 1.78
CACNB3-210ENST00000548874 TMX4Q9H1E5 349 aaPredicted RBP26.18■■□□□ 1.78
CACNB3-210ENST00000548874 PODXL2Q9NZ53 605 aa26.18■■□□□ 1.78
CACNB3-210ENST00000548874 MROH5Q6ZUA9 1318 aa26.17■■□□□ 1.78
CACNB3-210ENST00000548874 DUOX1Q9NRD9 1551 aa26.17■■□□□ 1.78
CACNB3-210ENST00000548874 IL15P40933 162 aaPredicted RBP26.17■■□□□ 1.78
CACNB3-210ENST00000548874 GPSM2P81274 684 aa26.17■■□□□ 1.78
CACNB3-210ENST00000548874 RTKN2Q8IZC4 609 aa26.17■■□□□ 1.78
CACNB3-210ENST00000548874 FER1L6Q2WGJ9 1857 aa26.17■■□□□ 1.78
CACNB3-210ENST00000548874 XDHP47989 1333 aa26.16■■□□□ 1.78
CACNB3-210ENST00000548874 SURF6O75683 361 aaKnown RBP26.16■■□□□ 1.78
CACNB3-210ENST00000548874 HDAC1Q13547 482 aaPredicted RBP26.16■■□□□ 1.78
CACNB3-210ENST00000548874 GPR162Q16538 588 aa26.16■■□□□ 1.78
CACNB3-210ENST00000548874 MPNDQ8N594 471 aa26.16■■□□□ 1.78
CACNB3-210ENST00000548874 ANKRD2Q9GZV1 360 aa26.16■■□□□ 1.78
CACNB3-210ENST00000548874 VGLL2Q8N8G2 317 aa26.15■■□□□ 1.78
CACNB3-210ENST00000548874 RTFDC1Q9BY42 306 aaPredicted RBP26.15■■□□□ 1.78
CACNB3-210ENST00000548874 NSFL1CQ9UNZ2 370 aaKnown RBP26.15■■□□□ 1.78
CACNB3-210ENST00000548874 NFKBIEO00221 500 aa26.14■■□□□ 1.78
CACNB3-210ENST00000548874 G3BP1Q13283 466 aaKnown RBP eCLIP26.14■■□□□ 1.78
CACNB3-210ENST00000548874 DPP8Q6V1X1 898 aaPredicted RBP26.14■■□□□ 1.78
CACNB3-210ENST00000548874 PSMD1Q99460 953 aa26.14■■□□□ 1.78
CACNB3-210ENST00000548874 LTBP3Q9NS15 1303 aa26.14■■□□□ 1.77
CACNB3-210ENST00000548874 METTL24Q5JXM2 366 aa26.13■■□□□ 1.77
CACNB3-210ENST00000548874 HELBQ8NG08 1087 aaPredicted RBP26.13■■□□□ 1.77
CACNB3-210ENST00000548874 DCTPP1Q9H773 170 aa26.13■■□□□ 1.77
CACNB3-210ENST00000548874 ANKIB1Q9P2G1 1089 aa26.13■■□□□ 1.77
CACNB3-210ENST00000548874 EXOC6BQ9Y2D4 811 aa26.13■■□□□ 1.77
CACNB3-210ENST00000548874 GRIN3BO60391 1043 aa26.12■■□□□ 1.77
CACNB3-210ENST00000548874 SASH1O94885 1247 aa26.12■■□□□ 1.77
CACNB3-210ENST00000548874 FKBP4Q02790 459 aaKnown RBP eCLIP26.12■■□□□ 1.77
CACNB3-210ENST00000548874 HSP90AB4PQ58FF6 505 aa26.12■■□□□ 1.77
CACNB3-210ENST00000548874 TAF5LO75529 589 aa26.11■■□□□ 1.77
CACNB3-210ENST00000548874 PDE8BO95263 885 aa26.11■■□□□ 1.77
CACNB3-210ENST00000548874 ATP2B4P23634 1241 aa26.11■■□□□ 1.77
CACNB3-210ENST00000548874 TBC1D16Q8TBP0 767 aa26.11■■□□□ 1.77
CACNB3-210ENST00000548874 POLLQ9UGP5 575 aa26.11■■□□□ 1.77
CACNB3-210ENST00000548874 GGA1Q9UJY5 639 aa26.11■■□□□ 1.77
CACNB3-210ENST00000548874 LEMD3Q9Y2U8 911 aa26.11■■□□□ 1.77
CACNB3-210ENST00000548874 ERICH6BQ5W0A0 696 aa26.1■■□□□ 1.77
CACNB3-210ENST00000548874 ARHGAP27Q6ZUM4 889 aa26.1■■□□□ 1.77
CACNB3-210ENST00000548874 TAOK3Q9H2K8 898 aa26.1■■□□□ 1.77
CACNB3-210ENST00000548874 CEP126Q9P2H0 1117 aa26.1■■□□□ 1.77
CACNB3-210ENST00000548874 WTIPA6NIX2 430 aaPredicted RBP26.09■■□□□ 1.77
CACNB3-210ENST00000548874 UFL1O94874 794 aa26.09■■□□□ 1.77
CACNB3-210ENST00000548874 TFCP2Q12800 502 aa26.09■■□□□ 1.77
CACNB3-210ENST00000548874 OS9Q13438 667 aaPredicted RBP26.09■■□□□ 1.77
CACNB3-210ENST00000548874 RWDD1Q9H446 243 aaPredicted RBP26.09■■□□□ 1.77
CACNB3-210ENST00000548874 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.09■■□□□ 1.77
CACNB3-210ENST00000548874 RAB11FIP3O75154 756 aa26.08■■□□□ 1.77
CACNB3-210ENST00000548874 IGHDP01880 384 aa26.08■■□□□ 1.77
CACNB3-210ENST00000548874 UBE4AQ14139 1066 aa26.08■■□□□ 1.77
CACNB3-210ENST00000548874 ERC1Q8IUD2 1116 aa26.08■■□□□ 1.77
CACNB3-210ENST00000548874 SUPT20HQ8NEM7 779 aa26.08■■□□□ 1.77
CACNB3-210ENST00000548874 ZNF804BA4D1E1 1349 aa26.08■■□□□ 1.77
CACNB3-210ENST00000548874 SNAP23O00161 211 aa26.07■■□□□ 1.76
CACNB3-210ENST00000548874 FGFR2P21802 821 aa26.07■■□□□ 1.76
CACNB3-210ENST00000548874 RASSF7Q02833 373 aa26.07■■□□□ 1.76
CACNB3-210ENST00000548874 IRS2Q9Y4H2 1338 aa26.07■■□□□ 1.76
CACNB3-210ENST00000548874 GOLGB1Q14789 3259 aaKnown RBP26.06■■□□□ 1.76
CACNB3-210ENST00000548874 C6orf229H3BNL8 230 aa26.06■■□□□ 1.76
CACNB3-210ENST00000548874 PUM3Q15397 648 aaKnown RBP26.06■■□□□ 1.76
CACNB3-210ENST00000548874 KCNJ4P48050 445 aa26.05■■□□□ 1.76
CACNB3-210ENST00000548874 PRELPP51888 382 aa26.05■■□□□ 1.76
CACNB3-210ENST00000548874 C15orf52Q6ZUT6 534 aaKnown RBP26.05■■□□□ 1.76
CACNB3-210ENST00000548874 RHPN1Q8TCX5 695 aa26.05■■□□□ 1.76
CACNB3-210ENST00000548874 KIF1BPQ96EK5 621 aa26.05■■□□□ 1.76
CACNB3-210ENST00000548874 VPS33BQ9H267 617 aa26.05■■□□□ 1.76
CACNB3-210ENST00000548874 GPR108Q9NPR9 543 aa26.05■■□□□ 1.76
CACNB3-210ENST00000548874 MED23Q9ULK4 1368 aa26.05■■□□□ 1.76
CACNB3-210ENST00000548874 GCC1Q96CN9 775 aa26.04■■□□□ 1.76
CACNB3-210ENST00000548874 GPR101Q96P66 508 aaPredicted RBP26.04■■□□□ 1.76
CACNB3-210ENST00000548874 EYA3Q99504 573 aa26.04■■□□□ 1.76
CACNB3-210ENST00000548874 ZNF277Q9NRM2 450 aaPredicted RBP26.04■■□□□ 1.76
CACNB3-210ENST00000548874 ZNF609O15014 1411 aa26.04■■□□□ 1.76
CACNB3-210ENST00000548874 DCAF8L1A6NGE4 600 aa26.03■■□□□ 1.76
CACNB3-210ENST00000548874 KIAA2012Q0VF49 1180 aa26.03■■□□□ 1.76
CACNB3-210ENST00000548874 ATP2B3Q16720 1220 aa26.03■■□□□ 1.76
CACNB3-210ENST00000548874 SMC5Q8IY18 1101 aa26.03■■□□□ 1.76
CACNB3-210ENST00000548874 LPIN2Q92539 896 aa26.03■■□□□ 1.76
CACNB3-210ENST00000548874 AKAP2Q9Y2D5 859 aa26.03■■□□□ 1.76
CACNB3-210ENST00000548874 KLRK1P26718 216 aa26.02■■□□□ 1.76
CACNB3-210ENST00000548874 IARSP41252 1262 aaKnown RBP26.02■■□□□ 1.76
CACNB3-210ENST00000548874 WASHC4Q2M389 1173 aa26.02■■□□□ 1.76
CACNB3-210ENST00000548874 APBB1O00213 710 aa26.01■■□□□ 1.75
CACNB3-210ENST00000548874 SBF1O95248 1867 aa26.01■■□□□ 1.75
CACNB3-210ENST00000548874 LMNB1P20700 586 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms