RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 VGLL2Q8N8G2 317 aa8.83□□□□□ -1
TMEM116-206ENST00000548283 LRRCC1Q9C099 1032 aa8.83□□□□□ -1
TMEM116-206ENST00000548283 PNMA2Q9UL42 364 aa8.83□□□□□ -1
TMEM116-206ENST00000548283 MYH13Q9UKX3 1938 aa8.83□□□□□ -1
TMEM116-206ENST00000548283 BRCA1P38398 1863 aaKnown RBP8.83□□□□□ -1
TMEM116-206ENST00000548283 SASH1O94885 1247 aa8.83□□□□□ -1
TMEM116-206ENST00000548283 EPHA10Q5JZY3 1008 aa8.83□□□□□ -1
TMEM116-206ENST00000548283 ATG9AQ7Z3C6 839 aa8.83□□□□□ -1
TMEM116-206ENST00000548283 MRRFQ96E11 262 aaKnown RBP8.83□□□□□ -1
TMEM116-206ENST00000548283 KIF1BPQ96EK5 621 aa8.83□□□□□ -1
TMEM116-206ENST00000548283 USP21Q9UK80 565 aa8.83□□□□□ -1
TMEM116-206ENST00000548283 AFF2P51816 1311 aa8.83□□□□□ -1
TMEM116-206ENST00000548283 IRS2Q9Y4H2 1338 aa8.83□□□□□ -1
TMEM116-206ENST00000548283 PTMAP06454 111 aaKnown RBP8.82□□□□□ -1
TMEM116-206ENST00000548283 SETQ01105 290 aaPredicted RBP8.82□□□□□ -1
TMEM116-206ENST00000548283 BICC1Q9H694 974 aaKnown RBP8.82□□□□□ -1
TMEM116-206ENST00000548283 KIAA1522Q9P206 1035 aaPredicted RBP8.82□□□□□ -1
TMEM116-206ENST00000548283 UBN2Q6ZU65 1347 aa8.82□□□□□ -1
TMEM116-206ENST00000548283 SPTY2D1Q68D10 685 aaPredicted RBP8.82□□□□□ -1
TMEM116-206ENST00000548283 TTLL7Q6ZT98 887 aa8.82□□□□□ -1
TMEM116-206ENST00000548283 DNAJC10Q8IXB1 793 aa8.82□□□□□ -1
TMEM116-206ENST00000548283 SNX21Q969T3 373 aa8.82□□□□□ -1
TMEM116-206ENST00000548283 LOC102724428A0A0B4J2F2 783 aa8.82□□□□□ -1
TMEM116-206ENST00000548283 SIK1P57059 783 aa8.82□□□□□ -1
TMEM116-206ENST00000548283 CWF19L2Q2TBE0 894 aaKnown RBP8.82□□□□□ -1
TMEM116-206ENST00000548283 RHPN1Q8TCX5 695 aa8.82□□□□□ -1
TMEM116-206ENST00000548283 CACNA1SQ13698 1873 aa8.82□□□□□ -1
TMEM116-206ENST00000548283 ZMYND10O75800 440 aa8.81□□□□□ -1
TMEM116-206ENST00000548283 PRIM1P49642 420 aaKnown RBP8.81□□□□□ -1
TMEM116-206ENST00000548283 NLRP10Q86W26 655 aa8.81□□□□□ -1
TMEM116-206ENST00000548283 DDRGK1Q96HY6 314 aa8.81□□□□□ -1
TMEM116-206ENST00000548283 CCDC87Q9NVE4 849 aa8.81□□□□□ -1
TMEM116-206ENST00000548283 CWC25Q9NXE8 425 aaPredicted RBP8.81□□□□□ -1
TMEM116-206ENST00000548283 A1BGP04217 495 aa8.81□□□□□ -1
TMEM116-206ENST00000548283 EIF2S2P20042 333 aaKnown RBP8.81□□□□□ -1
TMEM116-206ENST00000548283 SLC27A3Q5K4L6 730 aa8.81□□□□□ -1
TMEM116-206ENST00000548283 LINC00116Q8NCU8 138 aa8.81□□□□□ -1
TMEM116-206ENST00000548283 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.81□□□□□ -1
TMEM116-206ENST00000548283 CDK5RAP2Q96SN8 1893 aa8.8□□□□□ -1
TMEM116-206ENST00000548283 A0A087WZG4 1122 aa8.8□□□□□ -1
TMEM116-206ENST00000548283 KLRG2A4D1S0 409 aaPredicted RBP8.8□□□□□ -1
TMEM116-206ENST00000548283 PAX3P23760 479 aa8.8□□□□□ -1
TMEM116-206ENST00000548283 NTSR2O95665 410 aa8.8□□□□□ -1
TMEM116-206ENST00000548283 NEXNQ0ZGT2 675 aa8.8□□□□□ -1
TMEM116-206ENST00000548283 DDX54Q8TDD1 881 aaKnown RBP8.8□□□□□ -1
TMEM116-206ENST00000548283 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.8□□□□□ -1
TMEM116-206ENST00000548283 MED23Q9ULK4 1368 aa8.8□□□□□ -1
TMEM116-206ENST00000548283 SNED1Q8TER0 1413 aa8.8□□□□□ -1
TMEM116-206ENST00000548283 KIF4AO95239 1232 aa8.8□□□□□ -1
TMEM116-206ENST00000548283 CRKLP46109 303 aaKnown RBP8.8□□□□□ -1
TMEM116-206ENST00000548283 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
TMEM116-206ENST00000548283 PDS5AQ29RF7 1337 aaKnown RBP8.8□□□□□ -1
TMEM116-206ENST00000548283 ANXA1P04083 346 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 MX1P20591 662 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 PARP10Q53GL7 1025 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 MYD88Q99836 296 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 PLSCR1O15162 318 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 ANKRD45Q5TZF3 282 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 TBC1D9Q6ZT07 1266 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 MYO5AQ9Y4I1 1855 aaKnown RBP8.79□□□□□ -1
TMEM116-206ENST00000548283 CDC45O75419 566 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 PDE4DQ08499 809 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 SKIV2LQ15477 1246 aaKnown RBP8.79□□□□□ -1
TMEM116-206ENST00000548283 RIC3Q7Z5B4 369 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 FBXO41Q8TF61 875 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 ZBTB1Q9Y2K1 713 aa8.79□□□□□ -1
TMEM116-206ENST00000548283 RPS6KA4O75676 772 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 SDSP20132 328 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 ALDH8A1Q9H2A2 487 aaPredicted RBP8.78□□□□□ -1
TMEM116-206ENST00000548283 RAD50Q92878 1312 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 FGFR2P21802 821 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 GAS2L3Q86XJ1 694 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 CHD4Q14839 1912 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 MYH15Q9Y2K3 1946 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 SRGAP3O43295 1099 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 ADAMTS2O95450 1211 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 ATP5JP18859 108 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 SF3B3Q15393 1217 aaKnown RBP8.78□□□□□ -1
TMEM116-206ENST00000548283 HLFQ16534 295 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 TSGA10IPQ3SY00 556 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 C16orf71Q8IYS4 520 aaPredicted RBP8.78□□□□□ -1
TMEM116-206ENST00000548283 OTUD7AQ8TE49 926 aaPredicted RBP8.78□□□□□ -1
TMEM116-206ENST00000548283 USP26Q9BXU7 913 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 SUGT1Q9Y2Z0 365 aa8.78□□□□□ -1
TMEM116-206ENST00000548283 MAFGO15525 162 aa8.77□□□□□ -1.01
TMEM116-206ENST00000548283 PIP4K2BP78356 416 aa8.77□□□□□ -1.01
TMEM116-206ENST00000548283 SLC4A10Q6U841 1118 aa8.77□□□□□ -1.01
TMEM116-206ENST00000548283 TBC1D2Q9BYX2 928 aa8.77□□□□□ -1.01
TMEM116-206ENST00000548283 LNPKQ9C0E8 428 aa8.77□□□□□ -1.01
TMEM116-206ENST00000548283 CARMIL3Q8ND23 1372 aa8.77□□□□□ -1.01
TMEM116-206ENST00000548283 ZNF772Q68DY9 489 aaPredicted RBP8.77□□□□□ -1.01
TMEM116-206ENST00000548283 NARFQ9UHQ1 456 aa8.77□□□□□ -1.01
TMEM116-206ENST00000548283 CCDC88AQ3V6T2 1871 aa8.77□□□□□ -1.01
TMEM116-206ENST00000548283 FAM98CQ17RN3 349 aaKnown RBP8.76□□□□□ -1.01
TMEM116-206ENST00000548283 TTLL11Q8NHH1 800 aa8.76□□□□□ -1.01
TMEM116-206ENST00000548283 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.76□□□□□ -1.01
TMEM116-206ENST00000548283 RGS17Q9UGC6 210 aaPredicted RBP8.76□□□□□ -1.01
TMEM116-206ENST00000548283 ECM29Q5VYK3 1845 aa8.76□□□□□ -1.01
TMEM116-206ENST00000548283 MYL6BP14649 208 aa8.76□□□□□ -1.01
TMEM116-206ENST00000548283 USPL1Q5W0Q7 1092 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms