RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-211ENST00000548247 RASAL3Q86YV0 1011 aa17.3■□□□□ 0.36
RACGAP1-211ENST00000548247 SULF1Q8IWU6 871 aa17.3■□□□□ 0.36
RACGAP1-211ENST00000548247 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
RACGAP1-211ENST00000548247 VIL1P09327 827 aaKnown RBP17.28■□□□□ 0.36
RACGAP1-211ENST00000548247 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
RACGAP1-211ENST00000548247 SF3B3Q15393 1217 aaKnown RBP17.27■□□□□ 0.36
RACGAP1-211ENST00000548247 REM2Q8IYK8 340 aaPredicted RBP17.27■□□□□ 0.36
RACGAP1-211ENST00000548247 TBC1D16Q8TBP0 767 aa17.27■□□□□ 0.36
RACGAP1-211ENST00000548247 ZNF296Q8WUU4 475 aaPredicted RBP17.27■□□□□ 0.36
RACGAP1-211ENST00000548247 FAM89AQ96GI7 184 aa17.27■□□□□ 0.36
RACGAP1-211ENST00000548247 MAPK8IP3Q9UPT6 1336 aa17.26■□□□□ 0.35
RACGAP1-211ENST00000548247 MKI67P46013 3256 aaKnown RBP17.26■□□□□ 0.35
RACGAP1-211ENST00000548247 TBC1D8O95759 1140 aa17.26■□□□□ 0.35
RACGAP1-211ENST00000548247 ANGEL2Q5VTE6 544 aaKnown RBP17.26■□□□□ 0.35
RACGAP1-211ENST00000548247 MOB2Q70IA6 237 aa17.26■□□□□ 0.35
RACGAP1-211ENST00000548247 EYA3Q99504 573 aa17.26■□□□□ 0.35
RACGAP1-211ENST00000548247 SCARF1Q14162 830 aa17.25■□□□□ 0.35
RACGAP1-211ENST00000548247 PKN2Q16513 984 aaKnown RBP17.25■□□□□ 0.35
RACGAP1-211ENST00000548247 HDAC9Q9UKV0 1011 aa17.25■□□□□ 0.35
RACGAP1-211ENST00000548247 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
RACGAP1-211ENST00000548247 ZNF280AP59817 542 aaPredicted RBP17.24■□□□□ 0.35
RACGAP1-211ENST00000548247 RTL5Q5HYW3 569 aaPredicted RBP17.24■□□□□ 0.35
RACGAP1-211ENST00000548247 SCAF8Q9UPN6 1271 aaKnown RBP17.24■□□□□ 0.35
RACGAP1-211ENST00000548247 HTTP42858 3142 aa17.23■□□□□ 0.35
RACGAP1-211ENST00000548247 PAPPA2Q9BXP8 1791 aa17.23■□□□□ 0.35
RACGAP1-211ENST00000548247 FKBP1BP68106 108 aa17.23■□□□□ 0.35
RACGAP1-211ENST00000548247 KRT24Q2M2I5 525 aa17.23■□□□□ 0.35
RACGAP1-211ENST00000548247 ISCA1Q9BUE6 129 aa17.23■□□□□ 0.35
RACGAP1-211ENST00000548247 ZC3H12CQ9C0D7 883 aaKnown RBP17.23■□□□□ 0.35
RACGAP1-211ENST00000548247 ATP5J2-PTCD1G3V325 749 aa17.22■□□□□ 0.35
RACGAP1-211ENST00000548247 UBE2Q2LH0YL09 131 aa17.22■□□□□ 0.35
RACGAP1-211ENST00000548247 RPS8P62241 208 aaKnown RBP17.22■□□□□ 0.35
RACGAP1-211ENST00000548247 RIPK4P57078 832 aa17.21■□□□□ 0.35
RACGAP1-211ENST00000548247 PRAMEF18Q5VWM3 479 aa17.21■□□□□ 0.35
RACGAP1-211ENST00000548247 RSBN1LQ6PCB5 846 aaPredicted RBP17.21■□□□□ 0.35
RACGAP1-211ENST00000548247 AGBL3Q8NEM8 1001 aa17.21■□□□□ 0.35
RACGAP1-211ENST00000548247 GMLQ99445 158 aa17.21■□□□□ 0.35
RACGAP1-211ENST00000548247 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
RACGAP1-211ENST00000548247 PODXL2Q9NZ53 605 aa17.21■□□□□ 0.35
RACGAP1-211ENST00000548247 CHPF2Q9P2E5 772 aa17.21■□□□□ 0.35
RACGAP1-211ENST00000548247 CENPFP49454 3210 aa17.21■□□□□ 0.35
RACGAP1-211ENST00000548247 ZNF609O15014 1411 aa17.21■□□□□ 0.34
RACGAP1-211ENST00000548247 GPR25O00155 361 aa17.2■□□□□ 0.34
RACGAP1-211ENST00000548247 FBXO46Q6PJ61 603 aaPredicted RBP17.2■□□□□ 0.34
RACGAP1-211ENST00000548247 ANKRD13DQ6ZTN6 518 aa17.2■□□□□ 0.34
RACGAP1-211ENST00000548247 PLBD2Q8NHP8 589 aa17.2■□□□□ 0.34
RACGAP1-211ENST00000548247 MYOZ2Q9NPC6 264 aa17.2■□□□□ 0.34
RACGAP1-211ENST00000548247 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
RACGAP1-211ENST00000548247 PSME4Q14997 1843 aa17.19■□□□□ 0.34
RACGAP1-211ENST00000548247 G3V3G9 751 aa17.19■□□□□ 0.34
RACGAP1-211ENST00000548247 IRS4O14654 1257 aaPredicted RBP17.19■□□□□ 0.34
RACGAP1-211ENST00000548247 UFL1O94874 794 aa17.19■□□□□ 0.34
RACGAP1-211ENST00000548247 TM4SF4P48230 202 aa17.19■□□□□ 0.34
RACGAP1-211ENST00000548247 DCAF8Q5TAQ9 597 aa17.19■□□□□ 0.34
RACGAP1-211ENST00000548247 R3HDMLQ9H3Y0 253 aa17.19■□□□□ 0.34
RACGAP1-211ENST00000548247 PITPNM2Q9BZ72 1349 aa17.19■□□□□ 0.34
RACGAP1-211ENST00000548247 USP17L8P0C7I0 530 aa17.18■□□□□ 0.34
RACGAP1-211ENST00000548247 ANKIB1Q9P2G1 1089 aa17.18■□□□□ 0.34
RACGAP1-211ENST00000548247 BRCA2P51587 3418 aa17.18■□□□□ 0.34
RACGAP1-211ENST00000548247 TMPOP42166 694 aaKnown RBP17.17■□□□□ 0.34
RACGAP1-211ENST00000548247 MKRN3Q13064 507 aaKnown RBP17.17■□□□□ 0.34
RACGAP1-211ENST00000548247 NBPF9Q3BBW0 867 aa17.17■□□□□ 0.34
RACGAP1-211ENST00000548247 NOM1Q5C9Z4 860 aaKnown RBP17.17■□□□□ 0.34
RACGAP1-211ENST00000548247 GCC1Q96CN9 775 aa17.17■□□□□ 0.34
RACGAP1-211ENST00000548247 GGA1Q9UJY5 639 aa17.17■□□□□ 0.34
RACGAP1-211ENST00000548247 HABP4Q5JVS0 413 aaKnown RBP17.16■□□□□ 0.34
RACGAP1-211ENST00000548247 CCDC146Q8IYE0 955 aa17.16■□□□□ 0.34
RACGAP1-211ENST00000548247 PRKRIP1Q9H875 184 aaPredicted RBP17.16■□□□□ 0.34
RACGAP1-211ENST00000548247 FKTNO75072 461 aa17.15■□□□□ 0.34
RACGAP1-211ENST00000548247 LMOD3Q0VAK6 560 aa17.15■□□□□ 0.34
RACGAP1-211ENST00000548247 TRIM28Q13263 835 aaKnown RBP17.15■□□□□ 0.34
RACGAP1-211ENST00000548247 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
RACGAP1-211ENST00000548247 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
RACGAP1-211ENST00000548247 WTIPA6NIX2 430 aaPredicted RBP17.14■□□□□ 0.33
RACGAP1-211ENST00000548247 CHL1O00533 1208 aa17.14■□□□□ 0.33
RACGAP1-211ENST00000548247 TTLL12Q14166 644 aaPredicted RBP17.14■□□□□ 0.33
RACGAP1-211ENST00000548247 CFHR5Q9BXR6 569 aa17.14■□□□□ 0.33
RACGAP1-211ENST00000548247 USP17L3A6NCW0 530 aa17.13■□□□□ 0.33
RACGAP1-211ENST00000548247 USP17L4A6NCW7 530 aa17.13■□□□□ 0.33
RACGAP1-211ENST00000548247 USP17L1Q7RTZ2 530 aa17.13■□□□□ 0.33
RACGAP1-211ENST00000548247 RUNDC1Q96C34 613 aa17.13■□□□□ 0.33
RACGAP1-211ENST00000548247 MXD3Q9BW11 206 aa17.13■□□□□ 0.33
RACGAP1-211ENST00000548247 DBF4Q9UBU7 674 aaPredicted RBP17.13■□□□□ 0.33
RACGAP1-211ENST00000548247 POTEFA5A3E0 1075 aa17.12■□□□□ 0.33
RACGAP1-211ENST00000548247 PTPN12Q05209 780 aaKnown RBP17.12■□□□□ 0.33
RACGAP1-211ENST00000548247 SREBF2Q12772 1141 aa17.12■□□□□ 0.33
RACGAP1-211ENST00000548247 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
RACGAP1-211ENST00000548247 PODNQ7Z5L7 613 aa17.12■□□□□ 0.33
RACGAP1-211ENST00000548247 ZBTB38Q8NAP3 1195 aaPredicted RBP17.12■□□□□ 0.33
RACGAP1-211ENST00000548247 CCDC85AQ96PX6 553 aaPredicted RBP17.12■□□□□ 0.33
RACGAP1-211ENST00000548247 ADAMTS8Q9UP79 889 aa17.12■□□□□ 0.33
RACGAP1-211ENST00000548247 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
RACGAP1-211ENST00000548247 ZNF646O15015 1829 aaPredicted RBP17.12■□□□□ 0.33
RACGAP1-211ENST00000548247 WNT10BO00744 389 aa17.11■□□□□ 0.33
RACGAP1-211ENST00000548247 PRKG1Q13976 671 aa17.11■□□□□ 0.33
RACGAP1-211ENST00000548247 XDHP47989 1333 aa17.11■□□□□ 0.33
RACGAP1-211ENST00000548247 ZEB1P37275 1124 aaPredicted RBP17.1■□□□□ 0.33
RACGAP1-211ENST00000548247 DACT2Q5SW24 774 aa17.1■□□□□ 0.33
RACGAP1-211ENST00000548247 JARID2Q92833 1246 aaPredicted RBP17.1■□□□□ 0.33
RACGAP1-211ENST00000548247 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms