RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 PRPF40BQ6NWY9 871 aaKnown RBP21.25■□□□□ 0.99
KRT4-201ENST00000548097 RIPOR2Q9Y4F9 1068 aa21.25■□□□□ 0.99
KRT4-201ENST00000548097 KDM2BQ8NHM5 1336 aa21.24■□□□□ 0.99
KRT4-201ENST00000548097 WTIPA6NIX2 430 aaPredicted RBP21.24■□□□□ 0.99
KRT4-201ENST00000548097 SNAP23O00161 211 aa21.24■□□□□ 0.99
KRT4-201ENST00000548097 PPEF1O14829 653 aaPredicted RBP21.24■□□□□ 0.99
KRT4-201ENST00000548097 TAF5LO75529 589 aa21.24■□□□□ 0.99
KRT4-201ENST00000548097 ALDH1B1P30837 517 aa21.24■□□□□ 0.99
KRT4-201ENST00000548097 BSDC1Q9NW68 430 aaPredicted RBP21.24■□□□□ 0.99
KRT4-201ENST00000548097 TFCP2Q12800 502 aa21.23■□□□□ 0.99
KRT4-201ENST00000548097 SYT17Q9BSW7 474 aa21.23■□□□□ 0.99
KRT4-201ENST00000548097 IL1RAPL2Q9NP60 686 aa21.23■□□□□ 0.99
KRT4-201ENST00000548097 CHRNDQ07001 517 aa21.22■□□□□ 0.99
KRT4-201ENST00000548097 SKAP1Q86WV1 359 aa21.22■□□□□ 0.99
KRT4-201ENST00000548097 CNKSR1Q969H4 720 aa21.22■□□□□ 0.99
KRT4-201ENST00000548097 MINPP1Q9UNW1 487 aa21.22■□□□□ 0.99
KRT4-201ENST00000548097 UTRNP46939 3433 aa21.22■□□□□ 0.99
KRT4-201ENST00000548097 METTL24Q5JXM2 366 aa21.22■□□□□ 0.99
KRT4-201ENST00000548097 ANKRD45Q5TZF3 282 aa21.22■□□□□ 0.99
KRT4-201ENST00000548097 SMC5Q8IY18 1101 aa21.22■□□□□ 0.99
KRT4-201ENST00000548097 TTLL6Q8N841 843 aa21.22■□□□□ 0.99
KRT4-201ENST00000548097 PDZRN3Q9UPQ7 1066 aa21.22■□□□□ 0.99
KRT4-201ENST00000548097 BBOX1O75936 387 aa21.21■□□□□ 0.99
KRT4-201ENST00000548097 CIAO1O76071 339 aa21.21■□□□□ 0.99
KRT4-201ENST00000548097 RHPN1Q8TCX5 695 aa21.21■□□□□ 0.99
KRT4-201ENST00000548097 GCC1Q96CN9 775 aa21.21■□□□□ 0.99
KRT4-201ENST00000548097 PIM2Q9P1W9 311 aa21.21■□□□□ 0.99
KRT4-201ENST00000548097 IL15P40933 162 aaPredicted RBP21.2■□□□□ 0.98
KRT4-201ENST00000548097 C21orf2O43822 256 aa21.2■□□□□ 0.98
KRT4-201ENST00000548097 BRCA1P38398 1863 aaKnown RBP21.19■□□□□ 0.98
KRT4-201ENST00000548097 CENPQQ7L2Z9 268 aaPredicted RBP21.19■□□□□ 0.98
KRT4-201ENST00000548097 GPSM2P81274 684 aa21.18■□□□□ 0.98
KRT4-201ENST00000548097 VGLL2Q8N8G2 317 aa21.18■□□□□ 0.98
KRT4-201ENST00000548097 LRRCC1Q9C099 1032 aa21.18■□□□□ 0.98
KRT4-201ENST00000548097 BCS1LQ9Y276 419 aa21.18■□□□□ 0.98
KRT4-201ENST00000548097 ATP6V0A2Q9Y487 856 aa21.18■□□□□ 0.98
KRT4-201ENST00000548097 RAB11FIP3O75154 756 aa21.18■□□□□ 0.98
KRT4-201ENST00000548097 HSP90AB4PQ58FF6 505 aa21.18■□□□□ 0.98
KRT4-201ENST00000548097 C16orf71Q8IYS4 520 aaPredicted RBP21.18■□□□□ 0.98
KRT4-201ENST00000548097 KIF1BPQ96EK5 621 aa21.18■□□□□ 0.98
KRT4-201ENST00000548097 LNPKQ9C0E8 428 aa21.18■□□□□ 0.98
KRT4-201ENST00000548097 ANKIB1Q9P2G1 1089 aa21.18■□□□□ 0.98
KRT4-201ENST00000548097 CEP126Q9P2H0 1117 aa21.18■□□□□ 0.98
KRT4-201ENST00000548097 NSFL1CQ9UNZ2 370 aaKnown RBP21.18■□□□□ 0.98
KRT4-201ENST00000548097 A0A1B0GUL6 1792 aa21.17■□□□□ 0.98
KRT4-201ENST00000548097 MROH5Q6ZUA9 1318 aa21.17■□□□□ 0.98
KRT4-201ENST00000548097 DALRD3Q5D0E6 543 aaKnown RBP21.17■□□□□ 0.98
KRT4-201ENST00000548097 SP8Q8IXZ3 490 aa21.17■□□□□ 0.98
KRT4-201ENST00000548097 C7orf43Q8WVR3 580 aa21.17■□□□□ 0.98
KRT4-201ENST00000548097 GPR101Q96P66 508 aaPredicted RBP21.17■□□□□ 0.98
KRT4-201ENST00000548097 FBXO3Q9UK99 471 aa21.17■□□□□ 0.98
KRT4-201ENST00000548097 PDE8BO95263 885 aa21.16■□□□□ 0.98
KRT4-201ENST00000548097 TIMM10P62072 90 aa21.16■□□□□ 0.98
KRT4-201ENST00000548097 ERC1Q8IUD2 1116 aa21.16■□□□□ 0.98
KRT4-201ENST00000548097 LRRC37AA6NMS7 1700 aa21.15■□□□□ 0.98
KRT4-201ENST00000548097 NUCB1Q02818 461 aa21.15■□□□□ 0.98
KRT4-201ENST00000548097 OTUD7AQ8TE49 926 aaPredicted RBP21.15■□□□□ 0.98
KRT4-201ENST00000548097 EAF2Q96CJ1 260 aaPredicted RBP21.15■□□□□ 0.98
KRT4-201ENST00000548097 CCDC8Q9H0W5 538 aaPredicted RBP21.15■□□□□ 0.98
KRT4-201ENST00000548097 TLR7Q9NYK1 1049 aaKnown RBP21.15■□□□□ 0.98
KRT4-201ENST00000548097 KLRK1P26718 216 aa21.14■□□□□ 0.97
KRT4-201ENST00000548097 CHD1LQ86WJ1 897 aa21.14■□□□□ 0.97
KRT4-201ENST00000548097 PELP1Q8IZL8 1130 aaKnown RBP21.14■□□□□ 0.97
KRT4-201ENST00000548097 TNNI3KQ59H18 835 aa21.13■□□□□ 0.97
KRT4-201ENST00000548097 AACSQ86V21 672 aa21.13■□□□□ 0.97
KRT4-201ENST00000548097 NEUROD6Q96NK8 337 aa21.13■□□□□ 0.97
KRT4-201ENST00000548097 FPGT-TNNI3KV9GXZ4 949 aa21.13■□□□□ 0.97
KRT4-201ENST00000548097 A0A1B0GUL7 405 aa21.13■□□□□ 0.97
KRT4-201ENST00000548097 TMC4Q7Z404 712 aa21.13■□□□□ 0.97
KRT4-201ENST00000548097 POLLQ9UGP5 575 aa21.13■□□□□ 0.97
KRT4-201ENST00000548097 ADORA1P30542 326 aa21.12■□□□□ 0.97
KRT4-201ENST00000548097 ATP2B3Q16720 1220 aa21.12■□□□□ 0.97
KRT4-201ENST00000548097 MPNDQ8N594 471 aa21.12■□□□□ 0.97
KRT4-201ENST00000548097 ANKRD2Q9GZV1 360 aa21.12■□□□□ 0.97
KRT4-201ENST00000548097 XDHP47989 1333 aa21.12■□□□□ 0.97
KRT4-201ENST00000548097 UFL1O94874 794 aa21.11■□□□□ 0.97
KRT4-201ENST00000548097 KCNJ4P48050 445 aa21.11■□□□□ 0.97
KRT4-201ENST00000548097 DPP8Q6V1X1 898 aaPredicted RBP21.11■□□□□ 0.97
KRT4-201ENST00000548097 CLASRPQ8N2M8 674 aaKnown RBP21.11■□□□□ 0.97
KRT4-201ENST00000548097 TMX4Q9H1E5 349 aaPredicted RBP21.11■□□□□ 0.97
KRT4-201ENST00000548097 ZBTB47Q9UFB7 747 aaPredicted RBP21.11■□□□□ 0.97
KRT4-201ENST00000548097 ZNF609O15014 1411 aa21.11■□□□□ 0.97
KRT4-201ENST00000548097 FGFR2P21802 821 aa21.11■□□□□ 0.97
KRT4-201ENST00000548097 PDE4AP27815 886 aa21.11■□□□□ 0.97
KRT4-201ENST00000548097 PUM3Q15397 648 aaKnown RBP21.11■□□□□ 0.97
KRT4-201ENST00000548097 TXNRD3Q86VQ6 643 aa21.11■□□□□ 0.97
KRT4-201ENST00000548097 TBC1D16Q8TBP0 767 aa21.11■□□□□ 0.97
KRT4-201ENST00000548097 DBNDD2Q9BQY9 259 aa21.11■□□□□ 0.97
KRT4-201ENST00000548097 LTBP1Q14766 1721 aa21.1■□□□□ 0.97
KRT4-201ENST00000548097 ZNF804BA4D1E1 1349 aa21.1■□□□□ 0.97
KRT4-201ENST00000548097 DUOX1Q9NRD9 1551 aa21.1■□□□□ 0.97
KRT4-201ENST00000548097 C6orf229H3BNL8 230 aa21.1■□□□□ 0.97
KRT4-201ENST00000548097 TSHZ3Q63HK5 1081 aa21.1■□□□□ 0.97
KRT4-201ENST00000548097 GGA1Q9UJY5 639 aa21.1■□□□□ 0.97
KRT4-201ENST00000548097 PODXL2Q9NZ53 605 aa21.09■□□□□ 0.97
KRT4-201ENST00000548097 DBNLQ9UJU6 430 aaKnown RBP21.09■□□□□ 0.97
KRT4-201ENST00000548097 SNED1Q8TER0 1413 aa21.09■□□□□ 0.97
KRT4-201ENST00000548097 YBX3P16989 372 aaKnown RBP eCLIP21.08■□□□□ 0.97
KRT4-201ENST00000548097 CCDC93Q567U6 631 aa21.08■□□□□ 0.97
KRT4-201ENST00000548097 AKAP2Q9Y2D5 859 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms