RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 RIC1Q4ADV7 1423 aa8.65□□□□□ -1.02
SCAF11-211ENST00000547950 IRS4O14654 1257 aaPredicted RBP8.65□□□□□ -1.02
SCAF11-211ENST00000547950 LMOD1P29536 600 aaPredicted RBP8.65□□□□□ -1.02
SCAF11-211ENST00000547950 EMP3P54852 163 aa8.65□□□□□ -1.02
SCAF11-211ENST00000547950 GRAPQ13588 217 aa8.65□□□□□ -1.02
SCAF11-211ENST00000547950 CCDC30Q5VVM6 783 aa8.65□□□□□ -1.02
SCAF11-211ENST00000547950 MAP1SQ66K74 1059 aaPredicted RBP8.65□□□□□ -1.02
SCAF11-211ENST00000547950 JMYQ8N9B5 988 aa8.65□□□□□ -1.02
SCAF11-211ENST00000547950 SUPT20HQ8NEM7 779 aa8.65□□□□□ -1.02
SCAF11-211ENST00000547950 GRAPLQ8TC17 118 aaPredicted RBP8.65□□□□□ -1.02
SCAF11-211ENST00000547950 JARID2Q92833 1246 aaPredicted RBP8.65□□□□□ -1.02
SCAF11-211ENST00000547950 MYD88Q99836 296 aa8.65□□□□□ -1.02
SCAF11-211ENST00000547950 MRS2Q9HD23 443 aa8.65□□□□□ -1.02
SCAF11-211ENST00000547950 SALL2Q9Y467 1007 aaPredicted RBP8.65□□□□□ -1.02
SCAF11-211ENST00000547950 DLEC1Q9Y238 1755 aa8.65□□□□□ -1.02
SCAF11-211ENST00000547950 DLG5Q8TDM6 1919 aa8.64□□□□□ -1.03
SCAF11-211ENST00000547950 SBF1O95248 1867 aa8.64□□□□□ -1.03
SCAF11-211ENST00000547950 ECM2O94769 699 aaPredicted RBP8.64□□□□□ -1.03
SCAF11-211ENST00000547950 EPS15P42566 896 aa8.64□□□□□ -1.03
SCAF11-211ENST00000547950 TRIM28Q13263 835 aaKnown RBP8.64□□□□□ -1.03
SCAF11-211ENST00000547950 IFFO2Q5TF58 517 aa8.64□□□□□ -1.03
SCAF11-211ENST00000547950 WWC1Q8IX03 1113 aa8.64□□□□□ -1.03
SCAF11-211ENST00000547950 CNTROBQ8N137 903 aa8.64□□□□□ -1.03
SCAF11-211ENST00000547950 CHMP4AQ9BY43 222 aa8.64□□□□□ -1.03
SCAF11-211ENST00000547950 VPS33BQ9H267 617 aa8.64□□□□□ -1.03
SCAF11-211ENST00000547950 MKRN1Q9UHC7 482 aaKnown RBP8.64□□□□□ -1.03
SCAF11-211ENST00000547950 ZNRF3Q9ULT6 936 aa8.64□□□□□ -1.03
SCAF11-211ENST00000547950 NSFL1CQ9UNZ2 370 aaKnown RBP8.64□□□□□ -1.03
SCAF11-211ENST00000547950 C6orf229H3BNL8 230 aa8.63□□□□□ -1.03
SCAF11-211ENST00000547950 RAD17O75943 681 aa8.63□□□□□ -1.03
SCAF11-211ENST00000547950 DDX58O95786 925 aaKnown RBP8.63□□□□□ -1.03
SCAF11-211ENST00000547950 ITGBL1O95965 494 aaPredicted RBP8.63□□□□□ -1.03
SCAF11-211ENST00000547950 RPS8P62241 208 aaKnown RBP8.63□□□□□ -1.03
SCAF11-211ENST00000547950 CXCL9Q07325 125 aa8.63□□□□□ -1.03
SCAF11-211ENST00000547950 SF3B3Q15393 1217 aaKnown RBP8.63□□□□□ -1.03
SCAF11-211ENST00000547950 ZBTB38Q8NAP3 1195 aaPredicted RBP8.63□□□□□ -1.03
SCAF11-211ENST00000547950 CELF1Q92879 486 aaKnown RBP8.63□□□□□ -1.03
SCAF11-211ENST00000547950 CCDC85AQ96PX6 553 aaPredicted RBP8.63□□□□□ -1.03
SCAF11-211ENST00000547950 STK31Q9BXU1 1019 aa8.63□□□□□ -1.03
SCAF11-211ENST00000547950 RTFDC1Q9BY42 306 aaPredicted RBP8.63□□□□□ -1.03
SCAF11-211ENST00000547950 STK24Q9Y6E0 443 aa8.63□□□□□ -1.03
SCAF11-211ENST00000547950 LAMB4A4D0S4 1761 aa8.63□□□□□ -1.03
SCAF11-211ENST00000547950 SNED1Q8TER0 1413 aa8.63□□□□□ -1.03
SCAF11-211ENST00000547950 PASKQ96RG2 1323 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 PI4KAP2A4QPH2 592 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 TMEM88BA6NKF7 163 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 RIMBP2O15034 1052 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 SCNN1DP51172 638 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 GPSM2P81274 684 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 KIAA2012Q0VF49 1180 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 CCDC27Q2M243 656 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 WASHC4Q2M389 1173 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 TWISTNBQ3B726 338 aaPredicted RBP8.62□□□□□ -1.03
SCAF11-211ENST00000547950 TMC4Q7Z404 712 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 PI4KAP1Q8N8J0 262 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 CCDC191Q8NCU4 936 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 METTL22Q9BUU2 404 aaPredicted RBP8.62□□□□□ -1.03
SCAF11-211ENST00000547950 BCL2L13Q9BXK5 485 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 SEC31BQ9NQW1 1179 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 CWC25Q9NXE8 425 aaPredicted RBP8.62□□□□□ -1.03
SCAF11-211ENST00000547950 TAOK2Q9UL54 1235 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 MAP3K2Q9Y2U5 619 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 TNRC6CQ9HCJ0 1690 aaKnown RBP8.62□□□□□ -1.03
SCAF11-211ENST00000547950 FER1L6Q2WGJ9 1857 aa8.62□□□□□ -1.03
SCAF11-211ENST00000547950 WDR90Q96KV7 1748 aa8.61□□□□□ -1.03
SCAF11-211ENST00000547950 PCCAP05165 728 aaPredicted RBP8.61□□□□□ -1.03
SCAF11-211ENST00000547950 HSP90B1P14625 803 aaKnown RBP8.61□□□□□ -1.03
SCAF11-211ENST00000547950 GMPSP49915 693 aaPredicted RBP8.61□□□□□ -1.03
SCAF11-211ENST00000547950 TNIP1Q15025 636 aa8.61□□□□□ -1.03
SCAF11-211ENST00000547950 CIAPIN1Q6FI81 312 aa8.61□□□□□ -1.03
SCAF11-211ENST00000547950 KSR2Q6VAB6 950 aa8.61□□□□□ -1.03
SCAF11-211ENST00000547950 G2E3Q7L622 706 aa8.61□□□□□ -1.03
SCAF11-211ENST00000547950 MICALL2Q8IY33 904 aa8.61□□□□□ -1.03
SCAF11-211ENST00000547950 MS4A4AQ96JQ5 239 aa8.61□□□□□ -1.03
SCAF11-211ENST00000547950 GPR101Q96P66 508 aaPredicted RBP8.61□□□□□ -1.03
SCAF11-211ENST00000547950 GPRC5DQ9NZD1 345 aa8.61□□□□□ -1.03
SCAF11-211ENST00000547950 COL4A5P29400 1685 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 FAM205CA6NFA0 338 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 YDJCA8MPS7 323 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 PDE8AO60658 829 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 HSPA1AP0DMV8 641 aaKnown RBP8.6□□□□□ -1.03
SCAF11-211ENST00000547950 HSPA1BP0DMV9 641 aaKnown RBP8.6□□□□□ -1.03
SCAF11-211ENST00000547950 FMR1Q06787 632 aaKnown RBP eCLIP8.6□□□□□ -1.03
SCAF11-211ENST00000547950 NEXNQ0ZGT2 675 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 DOK7Q18PE1 504 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 CCDC152Q4G0S7 254 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 COL13A1Q5TAT6 717 aaPredicted RBP8.6□□□□□ -1.03
SCAF11-211ENST00000547950 USP50Q70EL3 339 aaPredicted RBP8.6□□□□□ -1.03
SCAF11-211ENST00000547950 FAM9BQ8IZU0 186 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 ZNF710Q8N1W2 664 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 DBNDD1Q9H9R9 158 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 ADARB2Q9NS39 739 aaKnown RBP8.6□□□□□ -1.03
SCAF11-211ENST00000547950 ANKIB1Q9P2G1 1089 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 POLLQ9UGP5 575 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 CNOT7Q9UIV1 285 aaKnown RBP8.6□□□□□ -1.03
SCAF11-211ENST00000547950 ABT1Q9ULW3 272 aaKnown RBP8.6□□□□□ -1.03
SCAF11-211ENST00000547950 TIAM2Q8IVF5 1701 aa8.6□□□□□ -1.03
SCAF11-211ENST00000547950 NUP98P52948 1817 aa8.59□□□□□ -1.03
SCAF11-211ENST00000547950 TRAF5O00463 557 aa8.59□□□□□ -1.03
SCAF11-211ENST00000547950 STK25O00506 426 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms