RNA–Protein interactions for RNA: ENST00000547356.1

SMARCC2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 741 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-204ENST00000547356 TAF1DQ9H5J8 278 aaPredicted RBP29.56■■■□□ 2.32
SMARCC2-204ENST00000547356 PODXL2Q9NZ53 605 aa29.56■■■□□ 2.32
SMARCC2-204ENST00000547356 CHMP3Q9Y3E7 222 aa29.56■■■□□ 2.32
SMARCC2-204ENST00000547356 LMBR1LQ6UX01 489 aa29.55■■■□□ 2.32
SMARCC2-204ENST00000547356 DBNDD1Q9H9R9 158 aa29.55■■■□□ 2.32
SMARCC2-204ENST00000547356 BSDC1Q9NW68 430 aaPredicted RBP29.55■■■□□ 2.32
SMARCC2-204ENST00000547356 GGA1Q9UJY5 639 aa29.55■■■□□ 2.32
SMARCC2-204ENST00000547356 RAD17O75943 681 aa29.54■■■□□ 2.32
SMARCC2-204ENST00000547356 DOK7Q18PE1 504 aa29.54■■■□□ 2.32
SMARCC2-204ENST00000547356 SMC1BQ8NDV3 1235 aa29.54■■■□□ 2.32
SMARCC2-204ENST00000547356 HACL1Q9UJ83 578 aa29.54■■■□□ 2.32
SMARCC2-204ENST00000547356 MINPP1Q9UNW1 487 aa29.54■■■□□ 2.32
SMARCC2-204ENST00000547356 IQCA1LA6NCM1 817 aa29.53■■■□□ 2.32
SMARCC2-204ENST00000547356 IGHMBP2P38935 993 aaKnown RBP29.53■■■□□ 2.32
SMARCC2-204ENST00000547356 KAZALD1Q96I82 304 aa29.53■■■□□ 2.32
SMARCC2-204ENST00000547356 XDHP47989 1333 aa29.52■■■□□ 2.32
SMARCC2-204ENST00000547356 SCNN1DP51172 638 aa29.52■■■□□ 2.32
SMARCC2-204ENST00000547356 FSTL1Q12841 308 aa29.52■■■□□ 2.32
SMARCC2-204ENST00000547356 EYA3Q99504 573 aa29.52■■■□□ 2.32
SMARCC2-204ENST00000547356 SCN4AP35499 1836 aa29.52■■■□□ 2.32
SMARCC2-204ENST00000547356 ANKRD18BA2A2Z9 1011 aa29.51■■■□□ 2.31
SMARCC2-204ENST00000547356 EPHX2P34913 555 aa29.51■■■□□ 2.31
SMARCC2-204ENST00000547356 EAPPQ56P03 285 aaPredicted RBP29.51■■■□□ 2.31
SMARCC2-204ENST00000547356 UTYO14607 1347 aa29.5■■■□□ 2.31
SMARCC2-204ENST00000547356 CIAPIN1Q6FI81 312 aa29.5■■■□□ 2.31
SMARCC2-204ENST00000547356 KCNQ5Q9NR82 932 aa29.5■■■□□ 2.31
SMARCC2-204ENST00000547356 ECE2O60344 883 aa29.49■■■□□ 2.31
SMARCC2-204ENST00000547356 EPS15P42566 896 aa29.49■■■□□ 2.31
SMARCC2-204ENST00000547356 BRPF1P55201 1214 aaPredicted RBP29.49■■■□□ 2.31
SMARCC2-204ENST00000547356 IFIT5Q13325 482 aaKnown RBP29.49■■■□□ 2.31
SMARCC2-204ENST00000547356 ZNF594Q96JF6 807 aaPredicted RBP29.49■■■□□ 2.31
SMARCC2-204ENST00000547356 MPHOSPH8Q99549 860 aa29.49■■■□□ 2.31
SMARCC2-204ENST00000547356 ZC3H12CQ9C0D7 883 aaKnown RBP29.49■■■□□ 2.31
SMARCC2-204ENST00000547356 ATP2B4P23634 1241 aa29.48■■■□□ 2.31
SMARCC2-204ENST00000547356 USP44Q9H0E7 712 aa29.48■■■□□ 2.31
SMARCC2-204ENST00000547356 ZBED9Q6R2W3 1325 aa29.47■■■□□ 2.31
SMARCC2-204ENST00000547356 BCAR3O75815 825 aa29.47■■■□□ 2.31
SMARCC2-204ENST00000547356 GMPSP49915 693 aaPredicted RBP29.47■■■□□ 2.31
SMARCC2-204ENST00000547356 BICC1Q9H694 974 aaKnown RBP29.47■■■□□ 2.31
SMARCC2-204ENST00000547356 LMOD1P29536 600 aaPredicted RBP29.46■■■□□ 2.31
SMARCC2-204ENST00000547356 PSMD14O00487 310 aa29.45■■■□□ 2.31
SMARCC2-204ENST00000547356 CCT4P50991 539 aaKnown RBP29.45■■■□□ 2.31
SMARCC2-204ENST00000547356 HTRA3P83110 453 aa29.45■■■□□ 2.31
SMARCC2-204ENST00000547356 CHADLQ6NUI6 762 aa29.45■■■□□ 2.31
SMARCC2-204ENST00000547356 API5Q9BZZ5 524 aaKnown RBP29.45■■■□□ 2.31
SMARCC2-204ENST00000547356 TNNQ9UQP3 1299 aa29.45■■■□□ 2.31
SMARCC2-204ENST00000547356 ZBTB12Q9Y330 459 aaPredicted RBP29.45■■■□□ 2.31
SMARCC2-204ENST00000547356 SHTN1A0MZ66 631 aa29.44■■■□□ 2.3
SMARCC2-204ENST00000547356 CHRNDQ07001 517 aa29.44■■■□□ 2.3
SMARCC2-204ENST00000547356 CCDC57Q2TAC2 916 aa29.44■■■□□ 2.3
SMARCC2-204ENST00000547356 ANKRD44Q8N8A2 993 aa29.44■■■□□ 2.3
SMARCC2-204ENST00000547356 HELBQ8NG08 1087 aaPredicted RBP29.44■■■□□ 2.3
SMARCC2-204ENST00000547356 SNAP23O00161 211 aa29.43■■■□□ 2.3
SMARCC2-204ENST00000547356 KLRK1P26718 216 aa29.43■■■□□ 2.3
SMARCC2-204ENST00000547356 TNIP1Q15025 636 aa29.43■■■□□ 2.3
SMARCC2-204ENST00000547356 LDHDQ86WU2 507 aa29.43■■■□□ 2.3
SMARCC2-204ENST00000547356 GPRC5DQ9NZD1 345 aa29.43■■■□□ 2.3
SMARCC2-204ENST00000547356 KIF16BQ96L93 1317 aa29.43■■■□□ 2.3
SMARCC2-204ENST00000547356 ADAMTSL1Q8N6G6 1762 aa29.42■■■□□ 2.3
SMARCC2-204ENST00000547356 G3V3G9 751 aa29.42■■■□□ 2.3
SMARCC2-204ENST00000547356 TAF7LQ5H9L4 462 aa29.42■■■□□ 2.3
SMARCC2-204ENST00000547356 DCAF8Q5TAQ9 597 aa29.42■■■□□ 2.3
SMARCC2-204ENST00000547356 TXNRD3Q86VQ6 643 aa29.42■■■□□ 2.3
SMARCC2-204ENST00000547356 CLEC11AQ9Y240 323 aa29.42■■■□□ 2.3
SMARCC2-204ENST00000547356 SCN9AQ15858 1988 aa29.42■■■□□ 2.3
SMARCC2-204ENST00000547356 TAF5LO75529 589 aa29.41■■■□□ 2.3
SMARCC2-204ENST00000547356 MED23Q9ULK4 1368 aa29.4■■■□□ 2.3
SMARCC2-204ENST00000547356 APLP1P51693 650 aa29.4■■■□□ 2.3
SMARCC2-204ENST00000547356 RABL6Q3YEC7 729 aaPredicted RBP29.4■■■□□ 2.3
SMARCC2-204ENST00000547356 FRAT1Q92837 279 aaPredicted RBP29.4■■■□□ 2.3
SMARCC2-204ENST00000547356 ANKRD2Q9GZV1 360 aa29.4■■■□□ 2.3
SMARCC2-204ENST00000547356 ZNF804BA4D1E1 1349 aa29.4■■■□□ 2.3
SMARCC2-204ENST00000547356 PNMA8AQ86V59 439 aaPredicted RBP29.39■■■□□ 2.3
SMARCC2-204ENST00000547356 PUS3Q9BZE2 481 aaKnown RBP29.39■■■□□ 2.3
SMARCC2-204ENST00000547356 LEMD3Q9Y2U8 911 aa29.39■■■□□ 2.3
SMARCC2-204ENST00000547356 MAP1SQ66K74 1059 aaPredicted RBP29.38■■■□□ 2.29
SMARCC2-204ENST00000547356 LDHAL6AQ6ZMR3 332 aa29.38■■■□□ 2.29
SMARCC2-204ENST00000547356 CNNM1Q9NRU3 951 aa29.38■■■□□ 2.29
SMARCC2-204ENST00000547356 A0A1B0GUL6 1792 aa29.38■■■□□ 2.29
SMARCC2-204ENST00000547356 TRIM27P14373 513 aa29.37■■■□□ 2.29
SMARCC2-204ENST00000547356 ARHGAP45Q92619 1136 aa29.37■■■□□ 2.29
SMARCC2-204ENST00000547356 PLIN1O60240 522 aa29.36■■■□□ 2.29
SMARCC2-204ENST00000547356 KCNJ4P48050 445 aa29.36■■■□□ 2.29
SMARCC2-204ENST00000547356 MICALL2Q8IY33 904 aa29.36■■■□□ 2.29
SMARCC2-204ENST00000547356 ADARB2Q9NS39 739 aaKnown RBP29.36■■■□□ 2.29
SMARCC2-204ENST00000547356 CNOT7Q9UIV1 285 aaKnown RBP29.36■■■□□ 2.29
SMARCC2-204ENST00000547356 KLHDC4Q8TBB5 520 aa29.35■■■□□ 2.29
SMARCC2-204ENST00000547356 TRPM4Q8TD43 1214 aa29.35■■■□□ 2.29
SMARCC2-204ENST00000547356 MEIS3Q99687 375 aa29.35■■■□□ 2.29
SMARCC2-204ENST00000547356 UBTFL1P0CB47 393 aaPredicted RBP29.34■■■□□ 2.29
SMARCC2-204ENST00000547356 USP50Q70EL3 339 aaPredicted RBP29.34■■■□□ 2.29
SMARCC2-204ENST00000547356 CLUAP1Q96AJ1 413 aa29.34■■■□□ 2.29
SMARCC2-204ENST00000547356 VIL1P09327 827 aaKnown RBP29.33■■■□□ 2.29
SMARCC2-204ENST00000547356 ATF7IPQ6VMQ6 1270 aa29.33■■■□□ 2.29
SMARCC2-204ENST00000547356 IRS2Q9Y4H2 1338 aa29.32■■■□□ 2.28
SMARCC2-204ENST00000547356 IPO8O15397 1037 aaKnown RBP29.32■■■□□ 2.28
SMARCC2-204ENST00000547356 ITGBL1O95965 494 aaPredicted RBP29.32■■■□□ 2.28
SMARCC2-204ENST00000547356 HIRAP54198 1017 aaPredicted RBP29.32■■■□□ 2.28
SMARCC2-204ENST00000547356 INTS3Q68E01 1043 aaKnown RBP29.32■■■□□ 2.28
SMARCC2-204ENST00000547356 LRRC24Q50LG9 513 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms