RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 CCDC152Q4G0S7 254 aa13.21□□□□□ -0.29
BEST3-208ENST00000547208 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.29
BEST3-208ENST00000547208 RTL9Q8NET4 1388 aa13.2□□□□□ -0.3
BEST3-208ENST00000547208 CASP7P55210 303 aa13.2□□□□□ -0.3
BEST3-208ENST00000547208 CTSWP56202 376 aa13.2□□□□□ -0.3
BEST3-208ENST00000547208 TTLL11Q8NHH1 800 aa13.2□□□□□ -0.3
BEST3-208ENST00000547208 TBC1D16Q8TBP0 767 aa13.2□□□□□ -0.3
BEST3-208ENST00000547208 CCDC85AQ96PX6 553 aaPredicted RBP13.2□□□□□ -0.3
BEST3-208ENST00000547208 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
BEST3-208ENST00000547208 CREBZFQ9NS37 354 aa13.2□□□□□ -0.3
BEST3-208ENST00000547208 PODXL2Q9NZ53 605 aa13.2□□□□□ -0.3
BEST3-208ENST00000547208 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
BEST3-208ENST00000547208 RAD17O75943 681 aa13.19□□□□□ -0.3
BEST3-208ENST00000547208 LMOD1P29536 600 aaPredicted RBP13.19□□□□□ -0.3
BEST3-208ENST00000547208 VEGFBP49765 207 aa13.19□□□□□ -0.3
BEST3-208ENST00000547208 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
BEST3-208ENST00000547208 GCKRQ14397 625 aa13.19□□□□□ -0.3
BEST3-208ENST00000547208 WASHC4Q2M389 1173 aa13.19□□□□□ -0.3
BEST3-208ENST00000547208 MAP1SQ66K74 1059 aaPredicted RBP13.19□□□□□ -0.3
BEST3-208ENST00000547208 CIAPIN1Q6FI81 312 aa13.19□□□□□ -0.3
BEST3-208ENST00000547208 UBE3BQ7Z3V4 1068 aa13.19□□□□□ -0.3
BEST3-208ENST00000547208 DNAAF4Q8WXU2 420 aa13.19□□□□□ -0.3
BEST3-208ENST00000547208 GPR101Q96P66 508 aaPredicted RBP13.19□□□□□ -0.3
BEST3-208ENST00000547208 C6orf229H3BNL8 230 aa13.18□□□□□ -0.3
BEST3-208ENST00000547208 GMPSP49915 693 aaPredicted RBP13.18□□□□□ -0.3
BEST3-208ENST00000547208 USP50Q70EL3 339 aaPredicted RBP13.18□□□□□ -0.3
BEST3-208ENST00000547208 CNTROBQ8N137 903 aa13.18□□□□□ -0.3
BEST3-208ENST00000547208 LINS1Q8NG48 757 aa13.18□□□□□ -0.3
BEST3-208ENST00000547208 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
BEST3-208ENST00000547208 GREM2Q9H772 168 aa13.18□□□□□ -0.3
BEST3-208ENST00000547208 DBNDD1Q9H9R9 158 aa13.18□□□□□ -0.3
BEST3-208ENST00000547208 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
BEST3-208ENST00000547208 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
BEST3-208ENST00000547208 LBX1P52954 281 aa13.17□□□□□ -0.3
BEST3-208ENST00000547208 ADARB2Q9NS39 739 aaKnown RBP13.17□□□□□ -0.3
BEST3-208ENST00000547208 CNTNAP1P78357 1384 aa13.17□□□□□ -0.3
BEST3-208ENST00000547208 THSD7BQ9C0I4 1608 aa13.17□□□□□ -0.3
BEST3-208ENST00000547208 SHTN1A0MZ66 631 aa13.16□□□□□ -0.3
BEST3-208ENST00000547208 F6X3S4 739 aa13.16□□□□□ -0.3
BEST3-208ENST00000547208 ECE2O60344 883 aa13.16□□□□□ -0.3
BEST3-208ENST00000547208 TNIP1Q15025 636 aa13.16□□□□□ -0.3
BEST3-208ENST00000547208 BEND3Q5T5X7 828 aa13.16□□□□□ -0.3
BEST3-208ENST00000547208 ANKRD18AQ8IVF6 992 aa13.16□□□□□ -0.3
BEST3-208ENST00000547208 EYA3Q99504 573 aa13.16□□□□□ -0.3
BEST3-208ENST00000547208 KCNQ5Q9NR82 932 aa13.16□□□□□ -0.3
BEST3-208ENST00000547208 XDHP47989 1333 aa13.15□□□□□ -0.3
BEST3-208ENST00000547208 ZNF609O15014 1411 aa13.15□□□□□ -0.3
BEST3-208ENST00000547208 WTIPA6NIX2 430 aaPredicted RBP13.15□□□□□ -0.3
BEST3-208ENST00000547208 TMEM88BA6NKF7 163 aa13.15□□□□□ -0.3
BEST3-208ENST00000547208 PSMD14O00487 310 aa13.15□□□□□ -0.3
BEST3-208ENST00000547208 UFL1O94874 794 aa13.15□□□□□ -0.3
BEST3-208ENST00000547208 CSF1RP07333 972 aa13.15□□□□□ -0.3
BEST3-208ENST00000547208 HIRAP54198 1017 aaPredicted RBP13.15□□□□□ -0.3
BEST3-208ENST00000547208 DOK7Q18PE1 504 aa13.15□□□□□ -0.3
BEST3-208ENST00000547208 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
BEST3-208ENST00000547208 ANKIB1Q9P2G1 1089 aa13.15□□□□□ -0.3
BEST3-208ENST00000547208 GGA1Q9UJY5 639 aa13.15□□□□□ -0.3
BEST3-208ENST00000547208 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
BEST3-208ENST00000547208 SLC34A2O95436 690 aa13.14□□□□□ -0.31
BEST3-208ENST00000547208 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
BEST3-208ENST00000547208 TRPM4Q8TD43 1214 aa13.14□□□□□ -0.31
BEST3-208ENST00000547208 ZC3H12CQ9C0D7 883 aaKnown RBP13.14□□□□□ -0.31
BEST3-208ENST00000547208 BSDC1Q9NW68 430 aaPredicted RBP13.14□□□□□ -0.31
BEST3-208ENST00000547208 PGAP2Q9UHJ9 254 aa13.14□□□□□ -0.31
BEST3-208ENST00000547208 MINPP1Q9UNW1 487 aa13.14□□□□□ -0.31
BEST3-208ENST00000547208 TRAF5O00463 557 aa13.13□□□□□ -0.31
BEST3-208ENST00000547208 HSPA8P11142 646 aaKnown RBP13.13□□□□□ -0.31
BEST3-208ENST00000547208 FOXO4P98177 505 aa13.13□□□□□ -0.31
BEST3-208ENST00000547208 DPF2Q92785 391 aa13.13□□□□□ -0.31
BEST3-208ENST00000547208 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
BEST3-208ENST00000547208 WBP1LQ9NX94 342 aa13.13□□□□□ -0.31
BEST3-208ENST00000547208 CNOT7Q9UIV1 285 aaKnown RBP13.13□□□□□ -0.31
BEST3-208ENST00000547208 MED23Q9ULK4 1368 aa13.12□□□□□ -0.31
BEST3-208ENST00000547208 E9PSI1 815 aa13.12□□□□□ -0.31
BEST3-208ENST00000547208 EGFRP00533 1210 aa13.12□□□□□ -0.31
BEST3-208ENST00000547208 VIL1P09327 827 aaKnown RBP13.12□□□□□ -0.31
BEST3-208ENST00000547208 ITGA6P23229 1130 aa13.12□□□□□ -0.31
BEST3-208ENST00000547208 ATP2B4P23634 1241 aa13.12□□□□□ -0.31
BEST3-208ENST00000547208 SLFN5Q08AF3 891 aa13.12□□□□□ -0.31
BEST3-208ENST00000547208 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
BEST3-208ENST00000547208 TSKSQ9UJT2 592 aa13.12□□□□□ -0.31
BEST3-208ENST00000547208 RASSF10A6NK89 507 aa13.11□□□□□ -0.31
BEST3-208ENST00000547208 CCER2I3L3R5 266 aa13.11□□□□□ -0.31
BEST3-208ENST00000547208 GRM8O00222 908 aa13.11□□□□□ -0.31
BEST3-208ENST00000547208 RPS12P25398 132 aaKnown RBP13.11□□□□□ -0.31
BEST3-208ENST00000547208 CCT4P50991 539 aaKnown RBP13.11□□□□□ -0.31
BEST3-208ENST00000547208 EPHA10Q5JZY3 1008 aa13.11□□□□□ -0.31
BEST3-208ENST00000547208 CST9Q5W186 159 aa13.11□□□□□ -0.31
BEST3-208ENST00000547208 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
BEST3-208ENST00000547208 MRPL50Q8N5N7 158 aaKnown RBP13.11□□□□□ -0.31
BEST3-208ENST00000547208 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
BEST3-208ENST00000547208 CDCA7LQ96GN5 454 aa13.11□□□□□ -0.31
BEST3-208ENST00000547208 ABHD8Q96I13 439 aa13.11□□□□□ -0.31
BEST3-208ENST00000547208 ECM29Q5VYK3 1845 aa13.11□□□□□ -0.31
BEST3-208ENST00000547208 ALDH1L1O75891 902 aa13.1□□□□□ -0.31
BEST3-208ENST00000547208 SAMD7Q7Z3H4 446 aa13.1□□□□□ -0.31
BEST3-208ENST00000547208 TXNRD3Q86VQ6 643 aa13.1□□□□□ -0.31
BEST3-208ENST00000547208 PRDM10Q9NQV6 1147 aa13.1□□□□□ -0.31
BEST3-208ENST00000547208 IRS2Q9Y4H2 1338 aa13.1□□□□□ -0.31
BEST3-208ENST00000547208 H7C1D1 291 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms