RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 C3orf67Q6ZVT6 689 aa20■□□□□ 0.79
BRF1-208ENST00000546997 CCDC24Q8N4L8 307 aa20■□□□□ 0.79
BRF1-208ENST00000546997 GZF1Q9H116 711 aaPredicted RBP20■□□□□ 0.79
BRF1-208ENST00000546997 PDCL3Q9H2J4 239 aa20■□□□□ 0.79
BRF1-208ENST00000546997 SASH1O94885 1247 aa19.99■□□□□ 0.79
BRF1-208ENST00000546997 CCDC57Q2TAC2 916 aa19.99■□□□□ 0.79
BRF1-208ENST00000546997 TTC22Q5TAA0 569 aa19.99■□□□□ 0.79
BRF1-208ENST00000546997 KIF1BPQ96EK5 621 aa19.99■□□□□ 0.79
BRF1-208ENST00000546997 NYXQ9GZU5 481 aa19.99■□□□□ 0.79
BRF1-208ENST00000546997 COL4A1P02462 1669 aa19.99■□□□□ 0.79
BRF1-208ENST00000546997 GTF2E1P29083 439 aaPredicted RBP19.99■□□□□ 0.79
BRF1-208ENST00000546997 G3BP1Q13283 466 aaKnown RBP eCLIP19.99■□□□□ 0.79
BRF1-208ENST00000546997 FLAD1Q8NFF5 587 aa19.99■□□□□ 0.79
BRF1-208ENST00000546997 ITGA6P23229 1130 aa19.98■□□□□ 0.79
BRF1-208ENST00000546997 TM4SF1P30408 202 aa19.98■□□□□ 0.79
BRF1-208ENST00000546997 DDR1Q08345 913 aa19.98■□□□□ 0.79
BRF1-208ENST00000546997 IFIT5Q13325 482 aaKnown RBP19.98■□□□□ 0.79
BRF1-208ENST00000546997 TPTE2Q6XPS3 522 aa19.98■□□□□ 0.79
BRF1-208ENST00000546997 TBC1D9Q6ZT07 1266 aa19.98■□□□□ 0.79
BRF1-208ENST00000546997 STK32BQ9NY57 414 aa19.98■□□□□ 0.79
BRF1-208ENST00000546997 ILDR2Q71H61 639 aa19.97■□□□□ 0.79
BRF1-208ENST00000546997 CCDC173Q0VFZ6 552 aa19.97■□□□□ 0.79
BRF1-208ENST00000546997 ATG9AQ7Z3C6 839 aa19.97■□□□□ 0.79
BRF1-208ENST00000546997 ERC1Q8IUD2 1116 aa19.97■□□□□ 0.79
BRF1-208ENST00000546997 PPP1R9BQ96SB3 815 aa19.97■□□□□ 0.79
BRF1-208ENST00000546997 LRP5O75197 1615 aa19.97■□□□□ 0.79
BRF1-208ENST00000546997 LRRC24Q50LG9 513 aa19.96■□□□□ 0.79
BRF1-208ENST00000546997 SLC10A5Q5PT55 438 aa19.96■□□□□ 0.79
BRF1-208ENST00000546997 PUS3Q9BZE2 481 aaKnown RBP19.96■□□□□ 0.79
BRF1-208ENST00000546997 SALL3Q9BXA9 1300 aa19.96■□□□□ 0.79
BRF1-208ENST00000546997 CDC45O75419 566 aa19.95■□□□□ 0.78
BRF1-208ENST00000546997 RAB3GAP1Q15042 981 aa19.95■□□□□ 0.78
BRF1-208ENST00000546997 CLEC17AQ6ZS10 378 aa19.95■□□□□ 0.78
BRF1-208ENST00000546997 CNBD1Q8NA66 436 aa19.95■□□□□ 0.78
BRF1-208ENST00000546997 NRXN2Q9P2S2 1712 aa19.95■□□□□ 0.78
BRF1-208ENST00000546997 POLRMTO00411 1230 aaKnown RBP19.95■□□□□ 0.78
BRF1-208ENST00000546997 HSP90B1P14625 803 aaKnown RBP19.95■□□□□ 0.78
BRF1-208ENST00000546997 SEC31BQ9NQW1 1179 aa19.95■□□□□ 0.78
BRF1-208ENST00000546997 ANKRD18BA2A2Z9 1011 aa19.94■□□□□ 0.78
BRF1-208ENST00000546997 EYA2O00167 538 aa19.94■□□□□ 0.78
BRF1-208ENST00000546997 CCDC152Q4G0S7 254 aa19.94■□□□□ 0.78
BRF1-208ENST00000546997 TSHZ3Q63HK5 1081 aa19.94■□□□□ 0.78
BRF1-208ENST00000546997 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
BRF1-208ENST00000546997 PRR5LQ6MZQ0 368 aa19.94■□□□□ 0.78
BRF1-208ENST00000546997 PDGFDQ9GZP0 370 aaPredicted RBP19.94■□□□□ 0.78
BRF1-208ENST00000546997 OSBPL3Q9H4L5 887 aa19.94■□□□□ 0.78
BRF1-208ENST00000546997 NPHP1O15259 732 aa19.94■□□□□ 0.78
BRF1-208ENST00000546997 SERPINB2P05120 415 aa19.94■□□□□ 0.78
BRF1-208ENST00000546997 TFCP2Q12800 502 aa19.94■□□□□ 0.78
BRF1-208ENST00000546997 NLGN1Q8N2Q7 840 aa19.94■□□□□ 0.78
BRF1-208ENST00000546997 ANKRD31Q8N7Z5 1873 aa19.93■□□□□ 0.78
BRF1-208ENST00000546997 RTL9Q8NET4 1388 aa19.93■□□□□ 0.78
BRF1-208ENST00000546997 TAF7LQ5H9L4 462 aa19.93■□□□□ 0.78
BRF1-208ENST00000546997 SF3B3Q15393 1217 aaKnown RBP19.92■□□□□ 0.78
BRF1-208ENST00000546997 HS1BP3Q53T59 392 aa19.92■□□□□ 0.78
BRF1-208ENST00000546997 PAXIP1Q6ZW49 1069 aaPredicted RBP19.92■□□□□ 0.78
BRF1-208ENST00000546997 RIC1Q4ADV7 1423 aa19.92■□□□□ 0.78
BRF1-208ENST00000546997 CIAO1O76071 339 aa19.92■□□□□ 0.78
BRF1-208ENST00000546997 MX1P20591 662 aa19.92■□□□□ 0.78
BRF1-208ENST00000546997 PDE1AP54750 535 aa19.92■□□□□ 0.78
BRF1-208ENST00000546997 CLASRPQ8N2M8 674 aaKnown RBP19.92■□□□□ 0.78
BRF1-208ENST00000546997 TNPO1Q92973 898 aaKnown RBP19.92■□□□□ 0.78
BRF1-208ENST00000546997 EAF2Q96CJ1 260 aaPredicted RBP19.92■□□□□ 0.78
BRF1-208ENST00000546997 SDSP20132 328 aa19.91■□□□□ 0.78
BRF1-208ENST00000546997 IL15P40933 162 aaPredicted RBP19.91■□□□□ 0.78
BRF1-208ENST00000546997 AACSQ86V21 672 aa19.9■□□□□ 0.78
BRF1-208ENST00000546997 NLRP3Q96P20 1036 aa19.9■□□□□ 0.78
BRF1-208ENST00000546997 MAP7D2Q96T17 732 aa19.9■□□□□ 0.78
BRF1-208ENST00000546997 A0A1B0GUL6 1792 aa19.9■□□□□ 0.78
BRF1-208ENST00000546997 MMP10P09238 476 aa19.9■□□□□ 0.78
BRF1-208ENST00000546997 LDHAL6AQ6ZMR3 332 aa19.9■□□□□ 0.78
BRF1-208ENST00000546997 SPRYD3Q8NCJ5 442 aa19.9■□□□□ 0.78
BRF1-208ENST00000546997 TLR7Q9NYK1 1049 aaKnown RBP19.9■□□□□ 0.78
BRF1-208ENST00000546997 ZSCAN30Q86W11 494 aa19.89■□□□□ 0.77
BRF1-208ENST00000546997 FBXO3Q9UK99 471 aa19.89■□□□□ 0.77
BRF1-208ENST00000546997 RIPOR2Q9Y4F9 1068 aa19.89■□□□□ 0.77
BRF1-208ENST00000546997 OFD1O75665 1012 aa19.88■□□□□ 0.77
BRF1-208ENST00000546997 TNNI3KQ59H18 835 aa19.88■□□□□ 0.77
BRF1-208ENST00000546997 ANP32BQ92688 251 aaKnown RBP19.88■□□□□ 0.77
BRF1-208ENST00000546997 FPGT-TNNI3KV9GXZ4 949 aa19.88■□□□□ 0.77
BRF1-208ENST00000546997 ST5P78524 1137 aa19.88■□□□□ 0.77
BRF1-208ENST00000546997 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.88■□□□□ 0.77
BRF1-208ENST00000546997 CCDC8Q9H0W5 538 aaPredicted RBP19.88■□□□□ 0.77
BRF1-208ENST00000546997 CNNM1Q9NRU3 951 aa19.88■□□□□ 0.77
BRF1-208ENST00000546997 STAP2Q9UGK3 403 aa19.88■□□□□ 0.77
BRF1-208ENST00000546997 GOLGB1Q14789 3259 aaKnown RBP19.88■□□□□ 0.77
BRF1-208ENST00000546997 GOLGA6L22H0YM25 854 aa19.87■□□□□ 0.77
BRF1-208ENST00000546997 IFIT2P09913 472 aaKnown RBP19.87■□□□□ 0.77
BRF1-208ENST00000546997 ZNF609O15014 1411 aa19.87■□□□□ 0.77
BRF1-208ENST00000546997 AK9Q5TCS8 1911 aa19.87■□□□□ 0.77
BRF1-208ENST00000546997 GAS2L3Q86XJ1 694 aa19.86■□□□□ 0.77
BRF1-208ENST00000546997 CELF1Q92879 486 aaKnown RBP19.86■□□□□ 0.77
BRF1-208ENST00000546997 DBNLQ9UJU6 430 aaKnown RBP19.86■□□□□ 0.77
BRF1-208ENST00000546997 VGLL2Q8N8G2 317 aa19.85■□□□□ 0.77
BRF1-208ENST00000546997 PI4K2BQ8TCG2 481 aa19.85■□□□□ 0.77
BRF1-208ENST00000546997 CDC5LQ99459 802 aaKnown RBP19.85■□□□□ 0.77
BRF1-208ENST00000546997 MPHOSPH8Q99549 860 aa19.85■□□□□ 0.77
BRF1-208ENST00000546997 KIF2CQ99661 725 aa19.85■□□□□ 0.77
BRF1-208ENST00000546997 COL11A2P13942 1736 aaPredicted RBP19.85■□□□□ 0.77
BRF1-208ENST00000546997 IGHMBP2P38935 993 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms