RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 XDHP47989 1333 aa18.71■□□□□ 0.59
CCDC38-205ENST00000546947 ADAMTSL1Q8N6G6 1762 aa18.7■□□□□ 0.58
CCDC38-205ENST00000546947 ITGA6P23229 1130 aa18.7■□□□□ 0.58
CCDC38-205ENST00000546947 LMOD1P29536 600 aaPredicted RBP18.7■□□□□ 0.58
CCDC38-205ENST00000546947 EPHX2P34913 555 aa18.7■□□□□ 0.58
CCDC38-205ENST00000546947 TNIP1Q15025 636 aa18.7■□□□□ 0.58
CCDC38-205ENST00000546947 FAM161AQ3B820 660 aa18.7■□□□□ 0.58
CCDC38-205ENST00000546947 CIAPIN1Q6FI81 312 aa18.7■□□□□ 0.58
CCDC38-205ENST00000546947 LDHDQ86WU2 507 aa18.7■□□□□ 0.58
CCDC38-205ENST00000546947 BCL2L13Q9BXK5 485 aa18.7■□□□□ 0.58
CCDC38-205ENST00000546947 RIMBP2O15034 1052 aa18.69■□□□□ 0.58
CCDC38-205ENST00000546947 UFL1O94874 794 aa18.69■□□□□ 0.58
CCDC38-205ENST00000546947 ATP2B4P23634 1241 aa18.69■□□□□ 0.58
CCDC38-205ENST00000546947 SCNN1DP51172 638 aa18.69■□□□□ 0.58
CCDC38-205ENST00000546947 FOXO4P98177 505 aa18.69■□□□□ 0.58
CCDC38-205ENST00000546947 CHADLQ6NUI6 762 aa18.69■□□□□ 0.58
CCDC38-205ENST00000546947 PNMA8AQ86V59 439 aaPredicted RBP18.69■□□□□ 0.58
CCDC38-205ENST00000546947 ZC3H12CQ9C0D7 883 aaKnown RBP18.69■□□□□ 0.58
CCDC38-205ENST00000546947 ANKRD18BA2A2Z9 1011 aa18.68■□□□□ 0.58
CCDC38-205ENST00000546947 YDJCA8MPS7 323 aa18.68■□□□□ 0.58
CCDC38-205ENST00000546947 BRPF1P55201 1214 aaPredicted RBP18.68■□□□□ 0.58
CCDC38-205ENST00000546947 MPHOSPH8Q99549 860 aa18.68■□□□□ 0.58
CCDC38-205ENST00000546947 MINPP1Q9UNW1 487 aa18.68■□□□□ 0.58
CCDC38-205ENST00000546947 RAD17O75943 681 aa18.67■□□□□ 0.58
CCDC38-205ENST00000546947 POTEIP0CG38 1075 aa18.67■□□□□ 0.58
CCDC38-205ENST00000546947 POTEJP0CG39 1038 aa18.67■□□□□ 0.58
CCDC38-205ENST00000546947 HNRNPUQ00839 825 aaKnown RBP eCLIP18.67■□□□□ 0.58
CCDC38-205ENST00000546947 EAPPQ56P03 285 aaPredicted RBP18.67■□□□□ 0.58
CCDC38-205ENST00000546947 DBNDD1Q9H9R9 158 aa18.67■□□□□ 0.58
CCDC38-205ENST00000546947 UTYO14607 1347 aa18.67■□□□□ 0.58
CCDC38-205ENST00000546947 PSME4Q14997 1843 aa18.67■□□□□ 0.58
CCDC38-205ENST00000546947 A0A1B0GUL6 1792 aa18.66■□□□□ 0.58
CCDC38-205ENST00000546947 ECE2O60344 883 aa18.66■□□□□ 0.58
CCDC38-205ENST00000546947 IFIT5Q13325 482 aaKnown RBP18.66■□□□□ 0.58
CCDC38-205ENST00000546947 LMBR1LQ6UX01 489 aa18.66■□□□□ 0.58
CCDC38-205ENST00000546947 GPR101Q96P66 508 aaPredicted RBP18.66■□□□□ 0.58
CCDC38-205ENST00000546947 GPRC5DQ9NZD1 345 aa18.66■□□□□ 0.58
CCDC38-205ENST00000546947 G3V3G9 751 aa18.65■□□□□ 0.58
CCDC38-205ENST00000546947 EPS15P42566 896 aa18.65■□□□□ 0.58
CCDC38-205ENST00000546947 CCT4P50991 539 aaKnown RBP18.65■□□□□ 0.58
CCDC38-205ENST00000546947 EPHA10Q5JZY3 1008 aa18.65■□□□□ 0.58
CCDC38-205ENST00000546947 DCAF8Q5TAQ9 597 aa18.65■□□□□ 0.58
CCDC38-205ENST00000546947 CHMP3Q9Y3E7 222 aa18.65■□□□□ 0.58
CCDC38-205ENST00000546947 SCN9AQ15858 1988 aa18.64■□□□□ 0.58
CCDC38-205ENST00000546947 NBPF7P0C2Y1 421 aaPredicted RBP18.64■□□□□ 0.57
CCDC38-205ENST00000546947 GMPSP49915 693 aaPredicted RBP18.64■□□□□ 0.57
CCDC38-205ENST00000546947 RARSP54136 660 aaKnown RBP18.64■□□□□ 0.57
CCDC38-205ENST00000546947 DOK7Q18PE1 504 aa18.64■□□□□ 0.57
CCDC38-205ENST00000546947 CCDC57Q2TAC2 916 aa18.64■□□□□ 0.57
CCDC38-205ENST00000546947 USP50Q70EL3 339 aaPredicted RBP18.64■□□□□ 0.57
CCDC38-205ENST00000546947 SUCLG2Q96I99 432 aa18.64■□□□□ 0.57
CCDC38-205ENST00000546947 ANKRD2Q9GZV1 360 aa18.64■□□□□ 0.57
CCDC38-205ENST00000546947 CLEC11AQ9Y240 323 aa18.64■□□□□ 0.57
CCDC38-205ENST00000546947 LEMD3Q9Y2U8 911 aa18.64■□□□□ 0.57
CCDC38-205ENST00000546947 MED23Q9ULK4 1368 aa18.64■□□□□ 0.57
CCDC38-205ENST00000546947 PSMD14O00487 310 aa18.63■□□□□ 0.57
CCDC38-205ENST00000546947 ADARB2Q9NS39 739 aaKnown RBP18.63■□□□□ 0.57
CCDC38-205ENST00000546947 NOB1Q9ULX3 412 aaKnown RBP18.63■□□□□ 0.57
CCDC38-205ENST00000546947 DPF2Q92785 391 aa18.62■□□□□ 0.57
CCDC38-205ENST00000546947 API5Q9BZZ5 524 aaKnown RBP18.62■□□□□ 0.57
CCDC38-205ENST00000546947 KIF16BQ96L93 1317 aa18.62■□□□□ 0.57
CCDC38-205ENST00000546947 RPS12P25398 132 aaKnown RBP18.61■□□□□ 0.57
CCDC38-205ENST00000546947 CHRNDQ07001 517 aa18.61■□□□□ 0.57
CCDC38-205ENST00000546947 TAF7LQ5H9L4 462 aa18.61■□□□□ 0.57
CCDC38-205ENST00000546947 KAZALD1Q96I82 304 aa18.61■□□□□ 0.57
CCDC38-205ENST00000546947 ZNF804BA4D1E1 1349 aa18.6■□□□□ 0.57
CCDC38-205ENST00000546947 RABL6Q3YEC7 729 aaPredicted RBP18.6■□□□□ 0.57
CCDC38-205ENST00000546947 PODNQ7Z5L7 613 aa18.6■□□□□ 0.57
CCDC38-205ENST00000546947 ARHGAP45Q92619 1136 aa18.6■□□□□ 0.57
CCDC38-205ENST00000546947 USP44Q9H0E7 712 aa18.6■□□□□ 0.57
CCDC38-205ENST00000546947 CNOT7Q9UIV1 285 aaKnown RBP18.6■□□□□ 0.57
CCDC38-205ENST00000546947 ZBED9Q6R2W3 1325 aa18.59■□□□□ 0.57
CCDC38-205ENST00000546947 PASKQ96RG2 1323 aa18.59■□□□□ 0.57
CCDC38-205ENST00000546947 H7C1D1 291 aa18.59■□□□□ 0.57
CCDC38-205ENST00000546947 VIL1P09327 827 aaKnown RBP18.59■□□□□ 0.57
CCDC38-205ENST00000546947 LDHAL6AQ6ZMR3 332 aa18.59■□□□□ 0.57
CCDC38-205ENST00000546947 DNAJC5GQ8N7S2 189 aa18.59■□□□□ 0.57
CCDC38-205ENST00000546947 BICC1Q9H694 974 aaKnown RBP18.59■□□□□ 0.57
CCDC38-205ENST00000546947 KCNQ5Q9NR82 932 aa18.59■□□□□ 0.57
CCDC38-205ENST00000546947 ZBTB12Q9Y330 459 aaPredicted RBP18.59■□□□□ 0.57
CCDC38-205ENST00000546947 ZNF609O15014 1411 aa18.58■□□□□ 0.57
CCDC38-205ENST00000546947 WTIPA6NIX2 430 aaPredicted RBP18.58■□□□□ 0.56
CCDC38-205ENST00000546947 ITGBL1O95965 494 aaPredicted RBP18.58■□□□□ 0.56
CCDC38-205ENST00000546947 KCNJ4P48050 445 aa18.58■□□□□ 0.56
CCDC38-205ENST00000546947 HTRA3P83110 453 aa18.58■□□□□ 0.56
CCDC38-205ENST00000546947 MAP1SQ66K74 1059 aaPredicted RBP18.58■□□□□ 0.56
CCDC38-205ENST00000546947 CNTROBQ8N137 903 aa18.58■□□□□ 0.56
CCDC38-205ENST00000546947 ZNF594Q96JF6 807 aaPredicted RBP18.58■□□□□ 0.56
CCDC38-205ENST00000546947 COA1Q9GZY4 146 aa18.58■□□□□ 0.56
CCDC38-205ENST00000546947 CNNM1Q9NRU3 951 aa18.58■□□□□ 0.56
CCDC38-205ENST00000546947 ZNF646O15015 1829 aaPredicted RBP18.58■□□□□ 0.56
CCDC38-205ENST00000546947 MICALL2Q8IY33 904 aa18.57■□□□□ 0.56
CCDC38-205ENST00000546947 TRPM7Q96QT4 1865 aa18.56■□□□□ 0.56
CCDC38-205ENST00000546947 USP17L3A6NCW0 530 aa18.56■□□□□ 0.56
CCDC38-205ENST00000546947 USP17L4A6NCW7 530 aa18.56■□□□□ 0.56
CCDC38-205ENST00000546947 IPO8O15397 1037 aaKnown RBP18.56■□□□□ 0.56
CCDC38-205ENST00000546947 RSBN1LQ6PCB5 846 aaPredicted RBP18.56■□□□□ 0.56
CCDC38-205ENST00000546947 USP17L1Q7RTZ2 530 aa18.56■□□□□ 0.56
CCDC38-205ENST00000546947 ANKRD44Q8N8A2 993 aa18.56■□□□□ 0.56
CCDC38-205ENST00000546947 AGBL3Q8NEM8 1001 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms