RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 GGA1Q9UJY5 639 aa20.1■□□□□ 0.81
DDX54-204ENST00000546898 GJA3Q9Y6H8 435 aa20.1■□□□□ 0.81
DDX54-204ENST00000546898 UTYO14607 1347 aa20.09■□□□□ 0.81
DDX54-204ENST00000546898 UFL1O94874 794 aa20.09■□□□□ 0.81
DDX54-204ENST00000546898 FOXO4P98177 505 aa20.09■□□□□ 0.81
DDX54-204ENST00000546898 ANKRD18BA2A2Z9 1011 aa20.08■□□□□ 0.81
DDX54-204ENST00000546898 ATP2B4P23634 1241 aa20.08■□□□□ 0.81
DDX54-204ENST00000546898 LMOD1P29536 600 aaPredicted RBP20.08■□□□□ 0.81
DDX54-204ENST00000546898 EPHX2P34913 555 aa20.08■□□□□ 0.81
DDX54-204ENST00000546898 CXCL9Q07325 125 aa20.08■□□□□ 0.81
DDX54-204ENST00000546898 TNIP1Q15025 636 aa20.08■□□□□ 0.81
DDX54-204ENST00000546898 CIAPIN1Q6FI81 312 aa20.08■□□□□ 0.81
DDX54-204ENST00000546898 SCN9AQ15858 1988 aa20.08■□□□□ 0.8
DDX54-204ENST00000546898 KIF16BQ96L93 1317 aa20.07■□□□□ 0.8
DDX54-204ENST00000546898 APLP1P51693 650 aa20.07■□□□□ 0.8
DDX54-204ENST00000546898 PNMA8AQ86V59 439 aaPredicted RBP20.07■□□□□ 0.8
DDX54-204ENST00000546898 LDHDQ86WU2 507 aa20.07■□□□□ 0.8
DDX54-204ENST00000546898 MPHOSPH8Q99549 860 aa20.07■□□□□ 0.8
DDX54-204ENST00000546898 ZC3H12CQ9C0D7 883 aaKnown RBP20.07■□□□□ 0.8
DDX54-204ENST00000546898 MINPP1Q9UNW1 487 aa20.07■□□□□ 0.8
DDX54-204ENST00000546898 ZBED9Q6R2W3 1325 aa20.06■□□□□ 0.8
DDX54-204ENST00000546898 RIMBP2O15034 1052 aa20.06■□□□□ 0.8
DDX54-204ENST00000546898 SCNN1DP51172 638 aa20.06■□□□□ 0.8
DDX54-204ENST00000546898 RARSP54136 660 aaKnown RBP20.06■□□□□ 0.8
DDX54-204ENST00000546898 IFIT5Q13325 482 aaKnown RBP20.06■□□□□ 0.8
DDX54-204ENST00000546898 CHADLQ6NUI6 762 aa20.06■□□□□ 0.8
DDX54-204ENST00000546898 CEP350Q5VT06 3117 aa20.06■□□□□ 0.8
DDX54-204ENST00000546898 MED23Q9ULK4 1368 aa20.06■□□□□ 0.8
DDX54-204ENST00000546898 YDJCA8MPS7 323 aa20.05■□□□□ 0.8
DDX54-204ENST00000546898 ECE2O60344 883 aa20.05■□□□□ 0.8
DDX54-204ENST00000546898 EPHA10Q5JZY3 1008 aa20.05■□□□□ 0.8
DDX54-204ENST00000546898 LMBR1LQ6UX01 489 aa20.05■□□□□ 0.8
DDX54-204ENST00000546898 API5Q9BZZ5 524 aaKnown RBP20.05■□□□□ 0.8
DDX54-204ENST00000546898 ANKRD2Q9GZV1 360 aa20.05■□□□□ 0.8
DDX54-204ENST00000546898 DBNDD1Q9H9R9 158 aa20.05■□□□□ 0.8
DDX54-204ENST00000546898 CHMP3Q9Y3E7 222 aa20.05■□□□□ 0.8
DDX54-204ENST00000546898 NBPF7P0C2Y1 421 aaPredicted RBP20.04■□□□□ 0.8
DDX54-204ENST00000546898 POTEIP0CG38 1075 aa20.04■□□□□ 0.8
DDX54-204ENST00000546898 POTEJP0CG39 1038 aa20.04■□□□□ 0.8
DDX54-204ENST00000546898 SUCLG2Q96I99 432 aa20.04■□□□□ 0.8
DDX54-204ENST00000546898 GPR101Q96P66 508 aaPredicted RBP20.04■□□□□ 0.8
DDX54-204ENST00000546898 NOB1Q9ULX3 412 aaKnown RBP20.04■□□□□ 0.8
DDX54-204ENST00000546898 RAD17O75943 681 aa20.03■□□□□ 0.8
DDX54-204ENST00000546898 CCT4P50991 539 aaKnown RBP20.03■□□□□ 0.8
DDX54-204ENST00000546898 CCDC57Q2TAC2 916 aa20.03■□□□□ 0.8
DDX54-204ENST00000546898 EAPPQ56P03 285 aaPredicted RBP20.03■□□□□ 0.8
DDX54-204ENST00000546898 GPRC5DQ9NZD1 345 aa20.03■□□□□ 0.8
DDX54-204ENST00000546898 LEMD3Q9Y2U8 911 aa20.03■□□□□ 0.8
DDX54-204ENST00000546898 G3V3G9 751 aa20.02■□□□□ 0.8
DDX54-204ENST00000546898 GMPSP49915 693 aaPredicted RBP20.02■□□□□ 0.8
DDX54-204ENST00000546898 DOK7Q18PE1 504 aa20.02■□□□□ 0.8
DDX54-204ENST00000546898 DCAF8Q5TAQ9 597 aa20.02■□□□□ 0.8
DDX54-204ENST00000546898 ARHGAP45Q92619 1136 aa20.02■□□□□ 0.8
DDX54-204ENST00000546898 KAZALD1Q96I82 304 aa20.02■□□□□ 0.8
DDX54-204ENST00000546898 ZNF646O15015 1829 aaPredicted RBP20.02■□□□□ 0.79
DDX54-204ENST00000546898 EPS15P42566 896 aa20.01■□□□□ 0.79
DDX54-204ENST00000546898 RABL6Q3YEC7 729 aaPredicted RBP20.01■□□□□ 0.79
DDX54-204ENST00000546898 USP50Q70EL3 339 aaPredicted RBP20.01■□□□□ 0.79
DDX54-204ENST00000546898 ZNF609O15014 1411 aa20.01■□□□□ 0.79
DDX54-204ENST00000546898 PSMD14O00487 310 aa20■□□□□ 0.79
DDX54-204ENST00000546898 RPS12P25398 132 aaKnown RBP20■□□□□ 0.79
DDX54-204ENST00000546898 CHRNDQ07001 517 aa20■□□□□ 0.79
DDX54-204ENST00000546898 TAF7LQ5H9L4 462 aa20■□□□□ 0.79
DDX54-204ENST00000546898 USP44Q9H0E7 712 aa20■□□□□ 0.79
DDX54-204ENST00000546898 BICC1Q9H694 974 aaKnown RBP20■□□□□ 0.79
DDX54-204ENST00000546898 ADARB2Q9NS39 739 aaKnown RBP20■□□□□ 0.79
DDX54-204ENST00000546898 ZNF804BA4D1E1 1349 aa20■□□□□ 0.79
DDX54-204ENST00000546898 PODNQ7Z5L7 613 aa19.99■□□□□ 0.79
DDX54-204ENST00000546898 DPF2Q92785 391 aa19.99■□□□□ 0.79
DDX54-204ENST00000546898 CLEC11AQ9Y240 323 aa19.99■□□□□ 0.79
DDX54-204ENST00000546898 IPO8O15397 1037 aaKnown RBP19.98■□□□□ 0.79
DDX54-204ENST00000546898 IFFO2Q5TF58 517 aa19.98■□□□□ 0.79
DDX54-204ENST00000546898 LDHAL6AQ6ZMR3 332 aa19.98■□□□□ 0.79
DDX54-204ENST00000546898 KCNJ4P48050 445 aa19.97■□□□□ 0.79
DDX54-204ENST00000546898 ANKRD44Q8N8A2 993 aa19.97■□□□□ 0.79
DDX54-204ENST00000546898 CNNM1Q9NRU3 951 aa19.97■□□□□ 0.79
DDX54-204ENST00000546898 PASKQ96RG2 1323 aa19.97■□□□□ 0.79
DDX54-204ENST00000546898 TRPM7Q96QT4 1865 aa19.96■□□□□ 0.79
DDX54-204ENST00000546898 VIL1P09327 827 aaKnown RBP19.96■□□□□ 0.79
DDX54-204ENST00000546898 ZNF594Q96JF6 807 aaPredicted RBP19.96■□□□□ 0.79
DDX54-204ENST00000546898 COA1Q9GZY4 146 aa19.96■□□□□ 0.79
DDX54-204ENST00000546898 CNOT7Q9UIV1 285 aaKnown RBP19.96■□□□□ 0.79
DDX54-204ENST00000546898 WTIPA6NIX2 430 aaPredicted RBP19.95■□□□□ 0.78
DDX54-204ENST00000546898 H7C1D1 291 aa19.95■□□□□ 0.78
DDX54-204ENST00000546898 UBTFL1P0CB47 393 aaPredicted RBP19.95■□□□□ 0.78
DDX54-204ENST00000546898 KCNQ5Q9NR82 932 aa19.95■□□□□ 0.78
DDX54-204ENST00000546898 HDAC5Q9UQL6 1122 aa19.95■□□□□ 0.78
DDX54-204ENST00000546898 ZBTB12Q9Y330 459 aaPredicted RBP19.95■□□□□ 0.78
DDX54-204ENST00000546898 BCAR3O75815 825 aa19.94■□□□□ 0.78
DDX54-204ENST00000546898 ITGBL1O95965 494 aaPredicted RBP19.94■□□□□ 0.78
DDX54-204ENST00000546898 INTS3Q68E01 1043 aaKnown RBP19.94■□□□□ 0.78
DDX54-204ENST00000546898 ATF7IPQ6VMQ6 1270 aa19.94■□□□□ 0.78
DDX54-204ENST00000546898 C15orf52Q6ZUT6 534 aaKnown RBP19.94■□□□□ 0.78
DDX54-204ENST00000546898 MICALL2Q8IY33 904 aa19.94■□□□□ 0.78
DDX54-204ENST00000546898 USP17L3A6NCW0 530 aa19.93■□□□□ 0.78
DDX54-204ENST00000546898 USP17L4A6NCW7 530 aa19.93■□□□□ 0.78
DDX54-204ENST00000546898 TAF5LO75529 589 aa19.93■□□□□ 0.78
DDX54-204ENST00000546898 MAP1SQ66K74 1059 aaPredicted RBP19.93■□□□□ 0.78
DDX54-204ENST00000546898 RSBN1LQ6PCB5 846 aaPredicted RBP19.93■□□□□ 0.78
DDX54-204ENST00000546898 USP17L1Q7RTZ2 530 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms