RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 BSDC1Q9NW68 430 aaPredicted RBP16.48■□□□□ 0.23
LINC00661-201ENST00000546512 C9orf78Q9NZ63 289 aaPredicted RBP16.48■□□□□ 0.23
LINC00661-201ENST00000546512 GGA1Q9UJY5 639 aa16.48■□□□□ 0.23
LINC00661-201ENST00000546512 XDHP47989 1333 aa16.47■□□□□ 0.23
LINC00661-201ENST00000546512 RAD17O75943 681 aa16.47■□□□□ 0.23
LINC00661-201ENST00000546512 IGHMBP2P38935 993 aaKnown RBP16.47■□□□□ 0.23
LINC00661-201ENST00000546512 SCNN1DP51172 638 aa16.47■□□□□ 0.23
LINC00661-201ENST00000546512 FOXO4P98177 505 aa16.47■□□□□ 0.23
LINC00661-201ENST00000546512 HNRNPUQ00839 825 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC00661-201ENST00000546512 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
LINC00661-201ENST00000546512 CIAPIN1Q6FI81 312 aa16.47■□□□□ 0.23
LINC00661-201ENST00000546512 CHADLQ6NUI6 762 aa16.47■□□□□ 0.23
LINC00661-201ENST00000546512 CEP350Q5VT06 3117 aa16.47■□□□□ 0.23
LINC00661-201ENST00000546512 YDJCA8MPS7 323 aa16.46■□□□□ 0.23
LINC00661-201ENST00000546512 TNIP1Q15025 636 aa16.46■□□□□ 0.23
LINC00661-201ENST00000546512 PNMA8AQ86V59 439 aaPredicted RBP16.46■□□□□ 0.23
LINC00661-201ENST00000546512 LDHDQ86WU2 507 aa16.46■□□□□ 0.23
LINC00661-201ENST00000546512 ZC3H12CQ9C0D7 883 aaKnown RBP16.46■□□□□ 0.23
LINC00661-201ENST00000546512 DBNDD1Q9H9R9 158 aa16.46■□□□□ 0.23
LINC00661-201ENST00000546512 MINPP1Q9UNW1 487 aa16.46■□□□□ 0.23
LINC00661-201ENST00000546512 CHMP3Q9Y3E7 222 aa16.46■□□□□ 0.23
LINC00661-201ENST00000546512 SPEF2Q9C093 1822 aa16.46■□□□□ 0.23
LINC00661-201ENST00000546512 ANKRD18BA2A2Z9 1011 aa16.45■□□□□ 0.22
LINC00661-201ENST00000546512 ECE2O60344 883 aa16.45■□□□□ 0.22
LINC00661-201ENST00000546512 ATP2B4P23634 1241 aa16.45■□□□□ 0.22
LINC00661-201ENST00000546512 EPS15P42566 896 aa16.45■□□□□ 0.22
LINC00661-201ENST00000546512 DOK7Q18PE1 504 aa16.45■□□□□ 0.22
LINC00661-201ENST00000546512 MPHOSPH8Q99549 860 aa16.45■□□□□ 0.22
LINC00661-201ENST00000546512 G3V3G9 751 aa16.44■□□□□ 0.22
LINC00661-201ENST00000546512 GMPSP49915 693 aaPredicted RBP16.44■□□□□ 0.22
LINC00661-201ENST00000546512 IFIT5Q13325 482 aaKnown RBP16.44■□□□□ 0.22
LINC00661-201ENST00000546512 EPHA10Q5JZY3 1008 aa16.44■□□□□ 0.22
LINC00661-201ENST00000546512 DCAF8Q5TAQ9 597 aa16.44■□□□□ 0.22
LINC00661-201ENST00000546512 LMBR1LQ6UX01 489 aa16.44■□□□□ 0.22
LINC00661-201ENST00000546512 CLEC11AQ9Y240 323 aa16.44■□□□□ 0.22
LINC00661-201ENST00000546512 NBPF7P0C2Y1 421 aaPredicted RBP16.43■□□□□ 0.22
LINC00661-201ENST00000546512 SUCLG2Q96I99 432 aa16.43■□□□□ 0.22
LINC00661-201ENST00000546512 GPRC5DQ9NZD1 345 aa16.43■□□□□ 0.22
LINC00661-201ENST00000546512 CCT4P50991 539 aaKnown RBP16.42■□□□□ 0.22
LINC00661-201ENST00000546512 RARSP54136 660 aaKnown RBP16.42■□□□□ 0.22
LINC00661-201ENST00000546512 HTRA3P83110 453 aa16.42■□□□□ 0.22
LINC00661-201ENST00000546512 CCDC57Q2TAC2 916 aa16.42■□□□□ 0.22
LINC00661-201ENST00000546512 NOB1Q9ULX3 412 aaKnown RBP16.42■□□□□ 0.22
LINC00661-201ENST00000546512 UTYO14607 1347 aa16.42■□□□□ 0.22
LINC00661-201ENST00000546512 ADAMTSL1Q8N6G6 1762 aa16.41■□□□□ 0.22
LINC00661-201ENST00000546512 WTIPA6NIX2 430 aaPredicted RBP16.41■□□□□ 0.22
LINC00661-201ENST00000546512 PSMD14O00487 310 aa16.41■□□□□ 0.22
LINC00661-201ENST00000546512 ANKRD2Q9GZV1 360 aa16.41■□□□□ 0.22
LINC00661-201ENST00000546512 KCNQ5Q9NR82 932 aa16.41■□□□□ 0.22
LINC00661-201ENST00000546512 MED23Q9ULK4 1368 aa16.4■□□□□ 0.22
LINC00661-201ENST00000546512 BRPF1P55201 1214 aaPredicted RBP16.4■□□□□ 0.22
LINC00661-201ENST00000546512 TAF7LQ5H9L4 462 aa16.4■□□□□ 0.22
LINC00661-201ENST00000546512 USP50Q70EL3 339 aaPredicted RBP16.4■□□□□ 0.22
LINC00661-201ENST00000546512 KAZALD1Q96I82 304 aa16.4■□□□□ 0.22
LINC00661-201ENST00000546512 API5Q9BZZ5 524 aaKnown RBP16.4■□□□□ 0.22
LINC00661-201ENST00000546512 ADARB2Q9NS39 739 aaKnown RBP16.4■□□□□ 0.22
LINC00661-201ENST00000546512 LEMD3Q9Y2U8 911 aa16.4■□□□□ 0.22
LINC00661-201ENST00000546512 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
LINC00661-201ENST00000546512 CHRNDQ07001 517 aa16.39■□□□□ 0.21
LINC00661-201ENST00000546512 MAP1SQ66K74 1059 aaPredicted RBP16.39■□□□□ 0.21
LINC00661-201ENST00000546512 ZNF594Q96JF6 807 aaPredicted RBP16.39■□□□□ 0.21
LINC00661-201ENST00000546512 BICC1Q9H694 974 aaKnown RBP16.39■□□□□ 0.21
LINC00661-201ENST00000546512 ZNF804BA4D1E1 1349 aa16.39■□□□□ 0.21
LINC00661-201ENST00000546512 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
LINC00661-201ENST00000546512 KCNJ4P48050 445 aa16.38■□□□□ 0.21
LINC00661-201ENST00000546512 MICALL2Q8IY33 904 aa16.38■□□□□ 0.21
LINC00661-201ENST00000546512 CNTROBQ8N137 903 aa16.38■□□□□ 0.21
LINC00661-201ENST00000546512 USP44Q9H0E7 712 aa16.38■□□□□ 0.21
LINC00661-201ENST00000546512 CNOT7Q9UIV1 285 aaKnown RBP16.38■□□□□ 0.21
LINC00661-201ENST00000546512 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
LINC00661-201ENST00000546512 H7C1D1 291 aa16.37■□□□□ 0.21
LINC00661-201ENST00000546512 ITGBL1O95965 494 aaPredicted RBP16.37■□□□□ 0.21
LINC00661-201ENST00000546512 RPS12P25398 132 aaKnown RBP16.37■□□□□ 0.21
LINC00661-201ENST00000546512 RABL6Q3YEC7 729 aaPredicted RBP16.37■□□□□ 0.21
LINC00661-201ENST00000546512 LDHAL6AQ6ZMR3 332 aa16.37■□□□□ 0.21
LINC00661-201ENST00000546512 PODNQ7Z5L7 613 aa16.37■□□□□ 0.21
LINC00661-201ENST00000546512 DNAJC5GQ8N7S2 189 aa16.37■□□□□ 0.21
LINC00661-201ENST00000546512 HELBQ8NG08 1087 aaPredicted RBP16.37■□□□□ 0.21
LINC00661-201ENST00000546512 DPF2Q92785 391 aa16.37■□□□□ 0.21
LINC00661-201ENST00000546512 CNNM1Q9NRU3 951 aa16.37■□□□□ 0.21
LINC00661-201ENST00000546512 PASKQ96RG2 1323 aa16.37■□□□□ 0.21
LINC00661-201ENST00000546512 SCN9AQ15858 1988 aa16.37■□□□□ 0.21
LINC00661-201ENST00000546512 TAF5LO75529 589 aa16.36■□□□□ 0.21
LINC00661-201ENST00000546512 VIL1P09327 827 aaKnown RBP16.36■□□□□ 0.21
LINC00661-201ENST00000546512 KLRK1P26718 216 aa16.36■□□□□ 0.21
LINC00661-201ENST00000546512 TXNRD3Q86VQ6 643 aa16.36■□□□□ 0.21
LINC00661-201ENST00000546512 ANKRD44Q8N8A2 993 aa16.36■□□□□ 0.21
LINC00661-201ENST00000546512 ZBED9Q6R2W3 1325 aa16.36■□□□□ 0.21
LINC00661-201ENST00000546512 TRPM4Q8TD43 1214 aa16.35■□□□□ 0.21
LINC00661-201ENST00000546512 ARHGAP45Q92619 1136 aa16.35■□□□□ 0.21
LINC00661-201ENST00000546512 COA1Q9GZY4 146 aa16.35■□□□□ 0.21
LINC00661-201ENST00000546512 USP17L3A6NCW0 530 aa16.34■□□□□ 0.21
LINC00661-201ENST00000546512 USP17L4A6NCW7 530 aa16.34■□□□□ 0.21
LINC00661-201ENST00000546512 SNAP23O00161 211 aa16.34■□□□□ 0.21
LINC00661-201ENST00000546512 PLIN1O60240 522 aa16.34■□□□□ 0.21
LINC00661-201ENST00000546512 BCAR3O75815 825 aa16.34■□□□□ 0.21
LINC00661-201ENST00000546512 HIRAP54198 1017 aaPredicted RBP16.34■□□□□ 0.21
LINC00661-201ENST00000546512 RSBN1LQ6PCB5 846 aaPredicted RBP16.34■□□□□ 0.21
LINC00661-201ENST00000546512 USP17L1Q7RTZ2 530 aa16.34■□□□□ 0.21
LINC00661-201ENST00000546512 FRAT1Q92837 279 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms