RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 ZBTB7BO15156 539 aaPredicted RBP17.27■□□□□ 0.36
TSEN54-203ENST00000545228 RABL6Q3YEC7 729 aaPredicted RBP17.27■□□□□ 0.36
TSEN54-203ENST00000545228 LMBR1LQ6UX01 489 aa17.27■□□□□ 0.36
TSEN54-203ENST00000545228 JARID2Q92833 1246 aaPredicted RBP17.27■□□□□ 0.36
TSEN54-203ENST00000545228 PPEF1O14829 653 aaPredicted RBP17.26■□□□□ 0.35
TSEN54-203ENST00000545228 NEFLP07196 543 aa17.26■□□□□ 0.35
TSEN54-203ENST00000545228 ITGA6P23229 1130 aa17.26■□□□□ 0.35
TSEN54-203ENST00000545228 FOXO4P98177 505 aa17.26■□□□□ 0.35
TSEN54-203ENST00000545228 FKBP4Q02790 459 aaKnown RBP eCLIP17.26■□□□□ 0.35
TSEN54-203ENST00000545228 MPHOSPH8Q99549 860 aa17.26■□□□□ 0.35
TSEN54-203ENST00000545228 LRRFIP2Q9Y608 721 aaKnown RBP17.26■□□□□ 0.35
TSEN54-203ENST00000545228 LRRC37AA6NMS7 1700 aa17.26■□□□□ 0.35
TSEN54-203ENST00000545228 HMMRO75330 724 aa17.25■□□□□ 0.35
TSEN54-203ENST00000545228 HSPA1AP0DMV8 641 aaKnown RBP17.25■□□□□ 0.35
TSEN54-203ENST00000545228 HSPA1BP0DMV9 641 aaKnown RBP17.25■□□□□ 0.35
TSEN54-203ENST00000545228 CREBZFQ9NS37 354 aa17.25■□□□□ 0.35
TSEN54-203ENST00000545228 TAF1P21675 1872 aa17.24■□□□□ 0.35
TSEN54-203ENST00000545228 POTEIP0CG38 1075 aa17.24■□□□□ 0.35
TSEN54-203ENST00000545228 POTEJP0CG39 1038 aa17.24■□□□□ 0.35
TSEN54-203ENST00000545228 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
TSEN54-203ENST00000545228 MTX1Q13505 466 aa17.24■□□□□ 0.35
TSEN54-203ENST00000545228 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
TSEN54-203ENST00000545228 RTKN2Q8IZC4 609 aa17.24■□□□□ 0.35
TSEN54-203ENST00000545228 L3MBTL3Q96JM7 780 aaPredicted RBP17.24■□□□□ 0.35
TSEN54-203ENST00000545228 GREM2Q9H772 168 aa17.24■□□□□ 0.35
TSEN54-203ENST00000545228 FBXO3Q9UK99 471 aa17.24■□□□□ 0.35
TSEN54-203ENST00000545228 C3orf67Q6ZVT6 689 aa17.23■□□□□ 0.35
TSEN54-203ENST00000545228 LDHDQ86WU2 507 aa17.23■□□□□ 0.35
TSEN54-203ENST00000545228 RPAP2Q8IXW5 612 aaPredicted RBP17.23■□□□□ 0.35
TSEN54-203ENST00000545228 TNS4Q8IZW8 715 aa17.23■□□□□ 0.35
TSEN54-203ENST00000545228 ZNF277Q9NRM2 450 aaPredicted RBP17.23■□□□□ 0.35
TSEN54-203ENST00000545228 SRGAP3O43295 1099 aa17.22■□□□□ 0.35
TSEN54-203ENST00000545228 C20orf194Q5TEA3 1177 aa17.22■□□□□ 0.35
TSEN54-203ENST00000545228 OLFM4Q6UX06 510 aa17.22■□□□□ 0.35
TSEN54-203ENST00000545228 SP8Q8IXZ3 490 aa17.22■□□□□ 0.35
TSEN54-203ENST00000545228 CCDC85AQ96PX6 553 aaPredicted RBP17.22■□□□□ 0.35
TSEN54-203ENST00000545228 TAF1DQ9H5J8 278 aaPredicted RBP17.22■□□□□ 0.35
TSEN54-203ENST00000545228 ZBTB40Q9NUA8 1239 aa17.22■□□□□ 0.35
TSEN54-203ENST00000545228 BSDC1Q9NW68 430 aaPredicted RBP17.22■□□□□ 0.35
TSEN54-203ENST00000545228 ATP6V0A2Q9Y487 856 aa17.22■□□□□ 0.35
TSEN54-203ENST00000545228 ANKRD44Q8N8A2 993 aa17.21■□□□□ 0.35
TSEN54-203ENST00000545228 SUPT20HQ8NEM7 779 aa17.21■□□□□ 0.35
TSEN54-203ENST00000545228 KAZALD1Q96I82 304 aa17.21■□□□□ 0.35
TSEN54-203ENST00000545228 CNNM1Q9NRU3 951 aa17.21■□□□□ 0.35
TSEN54-203ENST00000545228 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
TSEN54-203ENST00000545228 SCN4AP35499 1836 aa17.21■□□□□ 0.35
TSEN54-203ENST00000545228 ZNF541Q9H0D2 1346 aa17.21■□□□□ 0.34
TSEN54-203ENST00000545228 IARSP41252 1262 aaKnown RBP17.2■□□□□ 0.34
TSEN54-203ENST00000545228 EPHA10Q5JZY3 1008 aa17.2■□□□□ 0.34
TSEN54-203ENST00000545228 LDHAL6AQ6ZMR3 332 aa17.2■□□□□ 0.34
TSEN54-203ENST00000545228 ANKRD2Q9GZV1 360 aa17.2■□□□□ 0.34
TSEN54-203ENST00000545228 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
TSEN54-203ENST00000545228 HACL1Q9UJ83 578 aa17.2■□□□□ 0.34
TSEN54-203ENST00000545228 EAPPQ56P03 285 aaPredicted RBP17.19■□□□□ 0.34
TSEN54-203ENST00000545228 HSP90AB4PQ58FF6 505 aa17.19■□□□□ 0.34
TSEN54-203ENST00000545228 CELF1Q92879 486 aaKnown RBP17.19■□□□□ 0.34
TSEN54-203ENST00000545228 CRBNQ96SW2 442 aa17.19■□□□□ 0.34
TSEN54-203ENST00000545228 A0A1B0GUL6 1792 aa17.19■□□□□ 0.34
TSEN54-203ENST00000545228 MROH5Q6ZUA9 1318 aa17.19■□□□□ 0.34
TSEN54-203ENST00000545228 PASKQ96RG2 1323 aa17.19■□□□□ 0.34
TSEN54-203ENST00000545228 CAPN15O75808 1086 aa17.18■□□□□ 0.34
TSEN54-203ENST00000545228 EPHX2P34913 555 aa17.18■□□□□ 0.34
TSEN54-203ENST00000545228 ATP8B2P98198 1209 aa17.18■□□□□ 0.34
TSEN54-203ENST00000545228 JDP2Q8WYK2 163 aa17.18■□□□□ 0.34
TSEN54-203ENST00000545228 XDHP47989 1333 aa17.18■□□□□ 0.34
TSEN54-203ENST00000545228 FZD9O00144 591 aa17.17■□□□□ 0.34
TSEN54-203ENST00000545228 CIAO1O76071 339 aa17.17■□□□□ 0.34
TSEN54-203ENST00000545228 CEP85Q6P2H3 762 aa17.17■□□□□ 0.34
TSEN54-203ENST00000545228 DPP8Q6V1X1 898 aaPredicted RBP17.17■□□□□ 0.34
TSEN54-203ENST00000545228 PSMD1Q99460 953 aa17.17■□□□□ 0.34
TSEN54-203ENST00000545228 EYA3Q99504 573 aa17.17■□□□□ 0.34
TSEN54-203ENST00000545228 VPS33BQ9H267 617 aa17.17■□□□□ 0.34
TSEN54-203ENST00000545228 COPRSQ9NQ92 184 aa17.17■□□□□ 0.34
TSEN54-203ENST00000545228 ANKIB1Q9P2G1 1089 aa17.17■□□□□ 0.34
TSEN54-203ENST00000545228 CLEC11AQ9Y240 323 aa17.17■□□□□ 0.34
TSEN54-203ENST00000545228 PNMA8AQ86V59 439 aaPredicted RBP17.16■□□□□ 0.34
TSEN54-203ENST00000545228 ERC1Q8IUD2 1116 aa17.16■□□□□ 0.34
TSEN54-203ENST00000545228 GPC2Q8N158 579 aa17.16■□□□□ 0.34
TSEN54-203ENST00000545228 MPNDQ8N594 471 aa17.16■□□□□ 0.34
TSEN54-203ENST00000545228 SSH3Q8TE77 659 aa17.16■□□□□ 0.34
TSEN54-203ENST00000545228 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
TSEN54-203ENST00000545228 CNTNAP1P78357 1384 aa17.15■□□□□ 0.34
TSEN54-203ENST00000545228 SNED1Q8TER0 1413 aa17.15■□□□□ 0.34
TSEN54-203ENST00000545228 TMEM88BA6NKF7 163 aa17.15■□□□□ 0.34
TSEN54-203ENST00000545228 ITGBL1O95965 494 aaPredicted RBP17.15■□□□□ 0.34
TSEN54-203ENST00000545228 ATP2B4P23634 1241 aa17.15■□□□□ 0.34
TSEN54-203ENST00000545228 IL15P40933 162 aaPredicted RBP17.15■□□□□ 0.34
TSEN54-203ENST00000545228 KCNJ4P48050 445 aa17.15■□□□□ 0.34
TSEN54-203ENST00000545228 G3BP1Q13283 466 aaKnown RBP eCLIP17.15■□□□□ 0.34
TSEN54-203ENST00000545228 OS9Q13438 667 aaPredicted RBP17.15■□□□□ 0.34
TSEN54-203ENST00000545228 PODXL2Q9NZ53 605 aa17.15■□□□□ 0.34
TSEN54-203ENST00000545228 LEMD3Q9Y2U8 911 aa17.15■□□□□ 0.34
TSEN54-203ENST00000545228 LTBP1Q14766 1721 aa17.14■□□□□ 0.33
TSEN54-203ENST00000545228 EYA2O00167 538 aa17.14■□□□□ 0.33
TSEN54-203ENST00000545228 EIF6P56537 245 aaKnown RBP17.14■□□□□ 0.33
TSEN54-203ENST00000545228 PTPN12Q05209 780 aaKnown RBP17.14■□□□□ 0.33
TSEN54-203ENST00000545228 GGA1Q9UJY5 639 aa17.14■□□□□ 0.33
TSEN54-203ENST00000545228 NSFL1CQ9UNZ2 370 aaKnown RBP17.14■□□□□ 0.33
TSEN54-203ENST00000545228 POLA2Q14181 598 aa17.13■□□□□ 0.33
TSEN54-203ENST00000545228 METTL24Q5JXM2 366 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms