RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 GRM8O00222 908 aa17.65■□□□□ 0.42
VAMP1-208ENST00000544432 UFL1O94874 794 aa17.65■□□□□ 0.42
VAMP1-208ENST00000544432 ATP2B4P23634 1241 aa17.65■□□□□ 0.42
VAMP1-208ENST00000544432 EPS15P42566 896 aa17.65■□□□□ 0.42
VAMP1-208ENST00000544432 EAPPQ56P03 285 aaPredicted RBP17.65■□□□□ 0.42
VAMP1-208ENST00000544432 USP50Q70EL3 339 aaPredicted RBP17.65■□□□□ 0.42
VAMP1-208ENST00000544432 SSH1Q8WYL5 1049 aa17.65■□□□□ 0.42
VAMP1-208ENST00000544432 SRCIN1Q9C0H9 1055 aa17.65■□□□□ 0.42
VAMP1-208ENST00000544432 GPRC5DQ9NZD1 345 aa17.65■□□□□ 0.42
VAMP1-208ENST00000544432 MINPP1Q9UNW1 487 aa17.65■□□□□ 0.42
VAMP1-208ENST00000544432 MYH3P11055 1940 aa17.64■□□□□ 0.42
VAMP1-208ENST00000544432 RIMBP2O15034 1052 aa17.64■□□□□ 0.41
VAMP1-208ENST00000544432 RAD17O75943 681 aa17.64■□□□□ 0.41
VAMP1-208ENST00000544432 ITGA6P23229 1130 aa17.64■□□□□ 0.41
VAMP1-208ENST00000544432 IGHMBP2P38935 993 aaKnown RBP17.64■□□□□ 0.41
VAMP1-208ENST00000544432 FOXO4P98177 505 aa17.64■□□□□ 0.41
VAMP1-208ENST00000544432 ADARB2Q9NS39 739 aaKnown RBP17.64■□□□□ 0.41
VAMP1-208ENST00000544432 ITGBL1O95965 494 aaPredicted RBP17.63■□□□□ 0.41
VAMP1-208ENST00000544432 GMPSP49915 693 aaPredicted RBP17.63■□□□□ 0.41
VAMP1-208ENST00000544432 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
VAMP1-208ENST00000544432 SLC4A10Q6U841 1118 aa17.63■□□□□ 0.41
VAMP1-208ENST00000544432 MIER1Q8N108 512 aa17.63■□□□□ 0.41
VAMP1-208ENST00000544432 DPF2Q92785 391 aa17.63■□□□□ 0.41
VAMP1-208ENST00000544432 DBNDD1Q9H9R9 158 aa17.63■□□□□ 0.41
VAMP1-208ENST00000544432 C9orf78Q9NZ63 289 aaPredicted RBP17.63■□□□□ 0.41
VAMP1-208ENST00000544432 CLEC11AQ9Y240 323 aa17.63■□□□□ 0.41
VAMP1-208ENST00000544432 PASKQ96RG2 1323 aa17.63■□□□□ 0.41
VAMP1-208ENST00000544432 ADAMTSL1Q8N6G6 1762 aa17.63■□□□□ 0.41
VAMP1-208ENST00000544432 ECE2O60344 883 aa17.62■□□□□ 0.41
VAMP1-208ENST00000544432 BRPF1P55201 1214 aaPredicted RBP17.62■□□□□ 0.41
VAMP1-208ENST00000544432 UTYO14607 1347 aa17.62■□□□□ 0.41
VAMP1-208ENST00000544432 ANKRD18BA2A2Z9 1011 aa17.61■□□□□ 0.41
VAMP1-208ENST00000544432 RPS12P25398 132 aaKnown RBP17.61■□□□□ 0.41
VAMP1-208ENST00000544432 DOK7Q18PE1 504 aa17.61■□□□□ 0.41
VAMP1-208ENST00000544432 CNTROBQ8N137 903 aa17.61■□□□□ 0.41
VAMP1-208ENST00000544432 KLRG1Q96E93 195 aa17.61■□□□□ 0.41
VAMP1-208ENST00000544432 MPHOSPH8Q99549 860 aa17.61■□□□□ 0.41
VAMP1-208ENST00000544432 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
VAMP1-208ENST00000544432 ANKRD2Q9GZV1 360 aa17.61■□□□□ 0.41
VAMP1-208ENST00000544432 LEMD3Q9Y2U8 911 aa17.61■□□□□ 0.41
VAMP1-208ENST00000544432 PSMD14O00487 310 aa17.6■□□□□ 0.41
VAMP1-208ENST00000544432 CCT4P50991 539 aaKnown RBP17.6■□□□□ 0.41
VAMP1-208ENST00000544432 HTRA3P83110 453 aa17.6■□□□□ 0.41
VAMP1-208ENST00000544432 IFIT5Q13325 482 aaKnown RBP17.6■□□□□ 0.41
VAMP1-208ENST00000544432 GPR101Q96P66 508 aaPredicted RBP17.6■□□□□ 0.41
VAMP1-208ENST00000544432 CREBZFQ9NS37 354 aa17.6■□□□□ 0.41
VAMP1-208ENST00000544432 G3V3G9 751 aa17.59■□□□□ 0.41
VAMP1-208ENST00000544432 VIL1P09327 827 aaKnown RBP17.59■□□□□ 0.41
VAMP1-208ENST00000544432 EPHA10Q5JZY3 1008 aa17.59■□□□□ 0.41
VAMP1-208ENST00000544432 DCAF8Q5TAQ9 597 aa17.59■□□□□ 0.41
VAMP1-208ENST00000544432 LMBR1LQ6UX01 489 aa17.59■□□□□ 0.41
VAMP1-208ENST00000544432 PODNQ7Z5L7 613 aa17.59■□□□□ 0.41
VAMP1-208ENST00000544432 ZC3H15Q8WU90 426 aaKnown RBP17.59■□□□□ 0.41
VAMP1-208ENST00000544432 SMC4Q9NTJ3 1288 aa17.59■□□□□ 0.41
VAMP1-208ENST00000544432 PGAP2Q9UHJ9 254 aa17.59■□□□□ 0.41
VAMP1-208ENST00000544432 CNOT7Q9UIV1 285 aaKnown RBP17.59■□□□□ 0.41
VAMP1-208ENST00000544432 MED23Q9ULK4 1368 aa17.58■□□□□ 0.4
VAMP1-208ENST00000544432 H7C1D1 291 aa17.58■□□□□ 0.4
VAMP1-208ENST00000544432 MAP1SQ66K74 1059 aaPredicted RBP17.58■□□□□ 0.4
VAMP1-208ENST00000544432 JMYQ8N9B5 988 aa17.58■□□□□ 0.4
VAMP1-208ENST00000544432 KCNQ5Q9NR82 932 aa17.58■□□□□ 0.4
VAMP1-208ENST00000544432 ZBTB12Q9Y330 459 aaPredicted RBP17.57■□□□□ 0.4
VAMP1-208ENST00000544432 ZNF609O15014 1411 aa17.56■□□□□ 0.4
VAMP1-208ENST00000544432 NBPF7P0C2Y1 421 aaPredicted RBP17.56■□□□□ 0.4
VAMP1-208ENST00000544432 CHRNDQ07001 517 aa17.56■□□□□ 0.4
VAMP1-208ENST00000544432 CCDC57Q2TAC2 916 aa17.56■□□□□ 0.4
VAMP1-208ENST00000544432 MICALL2Q8IY33 904 aa17.56■□□□□ 0.4
VAMP1-208ENST00000544432 KAZALD1Q96I82 304 aa17.56■□□□□ 0.4
VAMP1-208ENST00000544432 SUCLG2Q96I99 432 aa17.56■□□□□ 0.4
VAMP1-208ENST00000544432 CHMP3Q9Y3E7 222 aa17.56■□□□□ 0.4
VAMP1-208ENST00000544432 ZNF804BA4D1E1 1349 aa17.55■□□□□ 0.4
VAMP1-208ENST00000544432 WTIPA6NIX2 430 aaPredicted RBP17.55■□□□□ 0.4
VAMP1-208ENST00000544432 TMEM88BA6NKF7 163 aa17.55■□□□□ 0.4
VAMP1-208ENST00000544432 RARSP54136 660 aaKnown RBP17.55■□□□□ 0.4
VAMP1-208ENST00000544432 RABL6Q3YEC7 729 aaPredicted RBP17.55■□□□□ 0.4
VAMP1-208ENST00000544432 AGBL3Q8NEM8 1001 aa17.55■□□□□ 0.4
VAMP1-208ENST00000544432 COA1Q9GZY4 146 aa17.55■□□□□ 0.4
VAMP1-208ENST00000544432 HIRAP54198 1017 aaPredicted RBP17.54■□□□□ 0.4
VAMP1-208ENST00000544432 RSBN1LQ6PCB5 846 aaPredicted RBP17.54■□□□□ 0.4
VAMP1-208ENST00000544432 C15orf52Q6ZUT6 534 aaKnown RBP17.54■□□□□ 0.4
VAMP1-208ENST00000544432 USP44Q9H0E7 712 aa17.54■□□□□ 0.4
VAMP1-208ENST00000544432 USP17L3A6NCW0 530 aa17.53■□□□□ 0.4
VAMP1-208ENST00000544432 USP17L4A6NCW7 530 aa17.53■□□□□ 0.4
VAMP1-208ENST00000544432 TAF7LQ5H9L4 462 aa17.53■□□□□ 0.4
VAMP1-208ENST00000544432 LDHAL6AQ6ZMR3 332 aa17.53■□□□□ 0.4
VAMP1-208ENST00000544432 USP17L1Q7RTZ2 530 aa17.53■□□□□ 0.4
VAMP1-208ENST00000544432 TRPM4Q8TD43 1214 aa17.53■□□□□ 0.4
VAMP1-208ENST00000544432 ARHGAP45Q92619 1136 aa17.53■□□□□ 0.4
VAMP1-208ENST00000544432 GMLQ99445 158 aa17.53■□□□□ 0.4
VAMP1-208ENST00000544432 API5Q9BZZ5 524 aaKnown RBP17.53■□□□□ 0.4
VAMP1-208ENST00000544432 NOB1Q9ULX3 412 aaKnown RBP17.53■□□□□ 0.4
VAMP1-208ENST00000544432 SCN9AQ15858 1988 aa17.52■□□□□ 0.4
VAMP1-208ENST00000544432 SHTN1A0MZ66 631 aa17.52■□□□□ 0.4
VAMP1-208ENST00000544432 ZNF280AP59817 542 aaPredicted RBP17.52■□□□□ 0.4
VAMP1-208ENST00000544432 TXNRD3Q86VQ6 643 aa17.52■□□□□ 0.4
VAMP1-208ENST00000544432 IRS2Q9Y4H2 1338 aa17.51■□□□□ 0.39
VAMP1-208ENST00000544432 KCNJ4P48050 445 aa17.51■□□□□ 0.39
VAMP1-208ENST00000544432 MMP14P50281 582 aa17.51■□□□□ 0.39
VAMP1-208ENST00000544432 STRIP1Q5VSL9 837 aa17.51■□□□□ 0.39
VAMP1-208ENST00000544432 SAMD7Q7Z3H4 446 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms