RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 TRPM7Q96QT4 1865 aa12.48□□□□□ -0.41
C2CD3-220ENST00000544293 CHL1O00533 1208 aa12.48□□□□□ -0.41
C2CD3-220ENST00000544293 RPS12P25398 132 aaKnown RBP12.48□□□□□ -0.41
C2CD3-220ENST00000544293 ZNF280AP59817 542 aaPredicted RBP12.48□□□□□ -0.41
C2CD3-220ENST00000544293 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
C2CD3-220ENST00000544293 MOB2Q70IA6 237 aa12.48□□□□□ -0.41
C2CD3-220ENST00000544293 RASAL3Q86YV0 1011 aa12.48□□□□□ -0.41
C2CD3-220ENST00000544293 CDCA5Q96FF9 252 aa12.48□□□□□ -0.41
C2CD3-220ENST00000544293 GMLQ99445 158 aa12.48□□□□□ -0.41
C2CD3-220ENST00000544293 TNRC18O15417 2968 aaPredicted RBP12.48□□□□□ -0.41
C2CD3-220ENST00000544293 WTIPA6NIX2 430 aaPredicted RBP12.47□□□□□ -0.41
C2CD3-220ENST00000544293 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
C2CD3-220ENST00000544293 C6orf229H3BNL8 230 aa12.47□□□□□ -0.41
C2CD3-220ENST00000544293 TMPOP42166 694 aaKnown RBP12.47□□□□□ -0.41
C2CD3-220ENST00000544293 KIF4BQ2VIQ3 1234 aa12.47□□□□□ -0.41
C2CD3-220ENST00000544293 CTU1Q7Z7A3 348 aaKnown RBP12.47□□□□□ -0.41
C2CD3-220ENST00000544293 DCPSQ96C86 337 aaKnown RBP12.47□□□□□ -0.41
C2CD3-220ENST00000544293 SEC31BQ9NQW1 1179 aa12.47□□□□□ -0.41
C2CD3-220ENST00000544293 GGA3Q9NZ52 723 aa12.47□□□□□ -0.41
C2CD3-220ENST00000544293 CHPF2Q9P2E5 772 aa12.47□□□□□ -0.41
C2CD3-220ENST00000544293 SCAF8Q9UPN6 1271 aaKnown RBP12.47□□□□□ -0.41
C2CD3-220ENST00000544293 HPS5Q9UPZ3 1129 aa12.47□□□□□ -0.41
C2CD3-220ENST00000544293 LAMB4A4D0S4 1761 aa12.47□□□□□ -0.41
C2CD3-220ENST00000544293 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.41
C2CD3-220ENST00000544293 RPS8P62241 208 aaKnown RBP12.46□□□□□ -0.41
C2CD3-220ENST00000544293 SCARF1Q14162 830 aa12.46□□□□□ -0.41
C2CD3-220ENST00000544293 ANKRD13DQ6ZTN6 518 aa12.46□□□□□ -0.41
C2CD3-220ENST00000544293 PLBD2Q8NHP8 589 aa12.46□□□□□ -0.41
C2CD3-220ENST00000544293 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
C2CD3-220ENST00000544293 PODXL2Q9NZ53 605 aa12.46□□□□□ -0.41
C2CD3-220ENST00000544293 PDE4DIPQ5VU43 2346 aa12.46□□□□□ -0.41
C2CD3-220ENST00000544293 TRIM28Q13263 835 aaKnown RBP12.45□□□□□ -0.42
C2CD3-220ENST00000544293 RTL5Q5HYW3 569 aaPredicted RBP12.45□□□□□ -0.42
C2CD3-220ENST00000544293 ANGEL2Q5VTE6 544 aaKnown RBP12.45□□□□□ -0.42
C2CD3-220ENST00000544293 R3HDMLQ9H3Y0 253 aa12.45□□□□□ -0.42
C2CD3-220ENST00000544293 TRIM35Q9UPQ4 493 aa12.45□□□□□ -0.42
C2CD3-220ENST00000544293 IRS4O14654 1257 aaPredicted RBP12.44□□□□□ -0.42
C2CD3-220ENST00000544293 NEFMP07197 916 aa12.44□□□□□ -0.42
C2CD3-220ENST00000544293 PRPF38BQ5VTL8 546 aaKnown RBP12.44□□□□□ -0.42
C2CD3-220ENST00000544293 PRAMEF18Q5VWM3 479 aa12.44□□□□□ -0.42
C2CD3-220ENST00000544293 SULF1Q8IWU6 871 aa12.44□□□□□ -0.42
C2CD3-220ENST00000544293 ZNF296Q8WUU4 475 aaPredicted RBP12.44□□□□□ -0.42
C2CD3-220ENST00000544293 UBE2Q2LH0YL09 131 aa12.43□□□□□ -0.42
C2CD3-220ENST00000544293 TBC1D8O95759 1140 aa12.43□□□□□ -0.42
C2CD3-220ENST00000544293 RSBN1LQ6PCB5 846 aaPredicted RBP12.43□□□□□ -0.42
C2CD3-220ENST00000544293 MAPK8IP3Q9UPT6 1336 aa12.42□□□□□ -0.42
C2CD3-220ENST00000544293 TM4SF4P48230 202 aa12.42□□□□□ -0.42
C2CD3-220ENST00000544293 AGBL3Q8NEM8 1001 aa12.42□□□□□ -0.42
C2CD3-220ENST00000544293 EYA3Q99504 573 aa12.42□□□□□ -0.42
C2CD3-220ENST00000544293 ZC3H12CQ9C0D7 883 aaKnown RBP12.42□□□□□ -0.42
C2CD3-220ENST00000544293 TAF1P21675 1872 aa12.41□□□□□ -0.42
C2CD3-220ENST00000544293 FKBP1BP68106 108 aa12.41□□□□□ -0.42
C2CD3-220ENST00000544293 NBPF9Q3BBW0 867 aa12.41□□□□□ -0.42
C2CD3-220ENST00000544293 REM2Q8IYK8 340 aaPredicted RBP12.41□□□□□ -0.42
C2CD3-220ENST00000544293 JARID2Q92833 1246 aaPredicted RBP12.41□□□□□ -0.42
C2CD3-220ENST00000544293 MXD3Q9BW11 206 aa12.41□□□□□ -0.42
C2CD3-220ENST00000544293 PNNQ9H307 717 aaKnown RBP12.41□□□□□ -0.42
C2CD3-220ENST00000544293 MYOZ2Q9NPC6 264 aa12.41□□□□□ -0.42
C2CD3-220ENST00000544293 ZNF609O15014 1411 aa12.4□□□□□ -0.42
C2CD3-220ENST00000544293 GPR25O00155 361 aa12.4□□□□□ -0.42
C2CD3-220ENST00000544293 UFL1O94874 794 aa12.4□□□□□ -0.42
C2CD3-220ENST00000544293 USP17L8P0C7I0 530 aa12.4□□□□□ -0.42
C2CD3-220ENST00000544293 HDGFL1Q5TGJ6 251 aa12.4□□□□□ -0.42
C2CD3-220ENST00000544293 ZBTB38Q8NAP3 1195 aaPredicted RBP12.4□□□□□ -0.42
C2CD3-220ENST00000544293 LRRC37AA6NMS7 1700 aa12.4□□□□□ -0.43
C2CD3-220ENST00000544293 NEUROD2Q15784 382 aa12.39□□□□□ -0.43
C2CD3-220ENST00000544293 PKN2Q16513 984 aaKnown RBP12.39□□□□□ -0.43
C2CD3-220ENST00000544293 NOM1Q5C9Z4 860 aaKnown RBP12.39□□□□□ -0.43
C2CD3-220ENST00000544293 PHAXQ9H814 394 aaKnown RBP12.39□□□□□ -0.43
C2CD3-220ENST00000544293 DBF4Q9UBU7 674 aaPredicted RBP12.39□□□□□ -0.43
C2CD3-220ENST00000544293 GGA1Q9UJY5 639 aa12.39□□□□□ -0.43
C2CD3-220ENST00000544293 PITPNM2Q9BZ72 1349 aa12.38□□□□□ -0.43
C2CD3-220ENST00000544293 LAMB2P55268 1798 aa12.38□□□□□ -0.43
C2CD3-220ENST00000544293 ANKRD36CQ5JPF3 1778 aa12.38□□□□□ -0.43
C2CD3-220ENST00000544293 HOXB7P09629 217 aa12.38□□□□□ -0.43
C2CD3-220ENST00000544293 PTPN12Q05209 780 aaKnown RBP12.38□□□□□ -0.43
C2CD3-220ENST00000544293 DUSP27Q5VZP5 1158 aa12.38□□□□□ -0.43
C2CD3-220ENST00000544293 CCDC146Q8IYE0 955 aa12.38□□□□□ -0.43
C2CD3-220ENST00000544293 CCDC85AQ96PX6 553 aaPredicted RBP12.38□□□□□ -0.43
C2CD3-220ENST00000544293 CFHR5Q9BXR6 569 aa12.38□□□□□ -0.43
C2CD3-220ENST00000544293 DLG5Q8TDM6 1919 aa12.38□□□□□ -0.43
C2CD3-220ENST00000544293 SCN9AQ15858 1988 aa12.38□□□□□ -0.43
C2CD3-220ENST00000544293 USP17L3A6NCW0 530 aa12.37□□□□□ -0.43
C2CD3-220ENST00000544293 USP17L4A6NCW7 530 aa12.37□□□□□ -0.43
C2CD3-220ENST00000544293 WNT10BO00744 389 aa12.37□□□□□ -0.43
C2CD3-220ENST00000544293 ZNF853P0CG23 659 aa12.37□□□□□ -0.43
C2CD3-220ENST00000544293 MKRN3Q13064 507 aaKnown RBP12.37□□□□□ -0.43
C2CD3-220ENST00000544293 DACT2Q5SW24 774 aa12.37□□□□□ -0.43
C2CD3-220ENST00000544293 USP17L1Q7RTZ2 530 aa12.37□□□□□ -0.43
C2CD3-220ENST00000544293 PODNQ7Z5L7 613 aa12.37□□□□□ -0.43
C2CD3-220ENST00000544293 TXNRD3Q86VQ6 643 aa12.37□□□□□ -0.43
C2CD3-220ENST00000544293 HYPKQ9NX55 129 aa12.37□□□□□ -0.43
C2CD3-220ENST00000544293 ANKIB1Q9P2G1 1089 aa12.37□□□□□ -0.43
C2CD3-220ENST00000544293 LAS1LQ9Y4W2 734 aaKnown RBP12.37□□□□□ -0.43
C2CD3-220ENST00000544293 PCCAP05165 728 aaPredicted RBP12.36□□□□□ -0.43
C2CD3-220ENST00000544293 CAP1Q01518 475 aa12.36□□□□□ -0.43
C2CD3-220ENST00000544293 LMOD3Q0VAK6 560 aa12.36□□□□□ -0.43
C2CD3-220ENST00000544293 LDLRAD1Q5T700 205 aa12.36□□□□□ -0.43
C2CD3-220ENST00000544293 FBXO46Q6PJ61 603 aaPredicted RBP12.36□□□□□ -0.43
C2CD3-220ENST00000544293 ZBED3Q96IU2 234 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms