RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 IGHMBP2P38935 993 aaKnown RBP29.46■■■□□ 2.31
CHFR-222ENST00000544093 CIAPIN1Q6FI81 312 aa29.46■■■□□ 2.31
CHFR-222ENST00000544093 C9orf78Q9NZ63 289 aaPredicted RBP29.46■■■□□ 2.31
CHFR-222ENST00000544093 UFL1O94874 794 aa29.45■■■□□ 2.31
CHFR-222ENST00000544093 SCNN1DP51172 638 aa29.45■■■□□ 2.31
CHFR-222ENST00000544093 SPEF2Q9C093 1822 aa29.45■■■□□ 2.3
CHFR-222ENST00000544093 ITGA6P23229 1130 aa29.44■■■□□ 2.3
CHFR-222ENST00000544093 ATP2B4P23634 1241 aa29.43■■■□□ 2.3
CHFR-222ENST00000544093 EAPPQ56P03 285 aaPredicted RBP29.43■■■□□ 2.3
CHFR-222ENST00000544093 ADAMTSL1Q8N6G6 1762 aa29.43■■■□□ 2.3
CHFR-222ENST00000544093 RIMBP2O15034 1052 aa29.42■■■□□ 2.3
CHFR-222ENST00000544093 FAM161AQ3B820 660 aa29.42■■■□□ 2.3
CHFR-222ENST00000544093 MPHOSPH8Q99549 860 aa29.42■■■□□ 2.3
CHFR-222ENST00000544093 SMC4Q9NTJ3 1288 aa29.42■■■□□ 2.3
CHFR-222ENST00000544093 MINPP1Q9UNW1 487 aa29.42■■■□□ 2.3
CHFR-222ENST00000544093 ANKRD18BA2A2Z9 1011 aa29.41■■■□□ 2.3
CHFR-222ENST00000544093 POTEIP0CG38 1075 aa29.41■■■□□ 2.3
CHFR-222ENST00000544093 POTEJP0CG39 1038 aa29.41■■■□□ 2.3
CHFR-222ENST00000544093 USP50Q70EL3 339 aaPredicted RBP29.41■■■□□ 2.3
CHFR-222ENST00000544093 GPRC5DQ9NZD1 345 aa29.41■■■□□ 2.3
CHFR-222ENST00000544093 YDJCA8MPS7 323 aa29.4■■■□□ 2.3
CHFR-222ENST00000544093 G3V3G9 751 aa29.4■■■□□ 2.3
CHFR-222ENST00000544093 RAD17O75943 681 aa29.4■■■□□ 2.3
CHFR-222ENST00000544093 FOXO4P98177 505 aa29.4■■■□□ 2.3
CHFR-222ENST00000544093 DCAF8Q5TAQ9 597 aa29.4■■■□□ 2.3
CHFR-222ENST00000544093 DBNDD1Q9H9R9 158 aa29.4■■■□□ 2.3
CHFR-222ENST00000544093 CLEC11AQ9Y240 323 aa29.4■■■□□ 2.3
CHFR-222ENST00000544093 ECE2O60344 883 aa29.39■■■□□ 2.3
CHFR-222ENST00000544093 IFIT5Q13325 482 aaKnown RBP29.39■■■□□ 2.3
CHFR-222ENST00000544093 BCL2L13Q9BXK5 485 aa29.39■■■□□ 2.3
CHFR-222ENST00000544093 ANKRD2Q9GZV1 360 aa29.39■■■□□ 2.3
CHFR-222ENST00000544093 ADARB2Q9NS39 739 aaKnown RBP29.39■■■□□ 2.3
CHFR-222ENST00000544093 EPS15P42566 896 aa29.38■■■□□ 2.29
CHFR-222ENST00000544093 GMPSP49915 693 aaPredicted RBP29.38■■■□□ 2.29
CHFR-222ENST00000544093 BRPF1P55201 1214 aaPredicted RBP29.37■■■□□ 2.29
CHFR-222ENST00000544093 UTYO14607 1347 aa29.37■■■□□ 2.29
CHFR-222ENST00000544093 LEMD3Q9Y2U8 911 aa29.36■■■□□ 2.29
CHFR-222ENST00000544093 CHMP3Q9Y3E7 222 aa29.36■■■□□ 2.29
CHFR-222ENST00000544093 MED23Q9ULK4 1368 aa29.36■■■□□ 2.29
CHFR-222ENST00000544093 RPS12P25398 132 aaKnown RBP29.35■■■□□ 2.29
CHFR-222ENST00000544093 CCT4P50991 539 aaKnown RBP29.35■■■□□ 2.29
CHFR-222ENST00000544093 DOK7Q18PE1 504 aa29.35■■■□□ 2.29
CHFR-222ENST00000544093 CCDC57Q2TAC2 916 aa29.35■■■□□ 2.29
CHFR-222ENST00000544093 LMBR1LQ6UX01 489 aa29.35■■■□□ 2.29
CHFR-222ENST00000544093 DPF2Q92785 391 aa29.35■■■□□ 2.29
CHFR-222ENST00000544093 GPR101Q96P66 508 aaPredicted RBP29.34■■■□□ 2.29
CHFR-222ENST00000544093 PSMD14O00487 310 aa29.33■■■□□ 2.29
CHFR-222ENST00000544093 PODNQ7Z5L7 613 aa29.33■■■□□ 2.29
CHFR-222ENST00000544093 DNAJC5GQ8N7S2 189 aa29.33■■■□□ 2.29
CHFR-222ENST00000544093 PASKQ96RG2 1323 aa29.33■■■□□ 2.29
CHFR-222ENST00000544093 H7C1D1 291 aa29.32■■■□□ 2.28
CHFR-222ENST00000544093 HNRNPUQ00839 825 aaKnown RBP eCLIP29.32■■■□□ 2.28
CHFR-222ENST00000544093 PSME4Q14997 1843 aa29.31■■■□□ 2.28
CHFR-222ENST00000544093 ITGBL1O95965 494 aaPredicted RBP29.31■■■□□ 2.28
CHFR-222ENST00000544093 NBPF7P0C2Y1 421 aaPredicted RBP29.31■■■□□ 2.28
CHFR-222ENST00000544093 TAF7LQ5H9L4 462 aa29.31■■■□□ 2.28
CHFR-222ENST00000544093 CNTROBQ8N137 903 aa29.31■■■□□ 2.28
CHFR-222ENST00000544093 API5Q9BZZ5 524 aaKnown RBP29.31■■■□□ 2.28
CHFR-222ENST00000544093 SCN9AQ15858 1988 aa29.3■■■□□ 2.28
CHFR-222ENST00000544093 KIF16BQ96L93 1317 aa29.3■■■□□ 2.28
CHFR-222ENST00000544093 EPHA10Q5JZY3 1008 aa29.3■■■□□ 2.28
CHFR-222ENST00000544093 CREBZFQ9NS37 354 aa29.3■■■□□ 2.28
CHFR-222ENST00000544093 CNOT7Q9UIV1 285 aaKnown RBP29.3■■■□□ 2.28
CHFR-222ENST00000544093 ZNF609O15014 1411 aa29.29■■■□□ 2.28
CHFR-222ENST00000544093 ZNF804BA4D1E1 1349 aa29.29■■■□□ 2.28
CHFR-222ENST00000544093 VIL1P09327 827 aaKnown RBP29.29■■■□□ 2.28
CHFR-222ENST00000544093 KCNJ4P48050 445 aa29.29■■■□□ 2.28
CHFR-222ENST00000544093 RARSP54136 660 aaKnown RBP29.29■■■□□ 2.28
CHFR-222ENST00000544093 CHRNDQ07001 517 aa29.29■■■□□ 2.28
CHFR-222ENST00000544093 MAP1SQ66K74 1059 aaPredicted RBP29.29■■■□□ 2.28
CHFR-222ENST00000544093 ZC3H15Q8WU90 426 aaKnown RBP29.29■■■□□ 2.28
CHFR-222ENST00000544093 KLRG1Q96E93 195 aa29.29■■■□□ 2.28
CHFR-222ENST00000544093 SUCLG2Q96I99 432 aa29.29■■■□□ 2.28
CHFR-222ENST00000544093 NOB1Q9ULX3 412 aaKnown RBP29.28■■■□□ 2.28
CHFR-222ENST00000544093 HTRA3P83110 453 aa29.27■■■□□ 2.28
CHFR-222ENST00000544093 LDHAL6AQ6ZMR3 332 aa29.27■■■□□ 2.28
CHFR-222ENST00000544093 MICALL2Q8IY33 904 aa29.27■■■□□ 2.28
CHFR-222ENST00000544093 COA1Q9GZY4 146 aa29.27■■■□□ 2.28
CHFR-222ENST00000544093 ZBTB12Q9Y330 459 aaPredicted RBP29.27■■■□□ 2.28
CHFR-222ENST00000544093 RABL6Q3YEC7 729 aaPredicted RBP29.26■■■□□ 2.27
CHFR-222ENST00000544093 ARHGAP45Q92619 1136 aa29.26■■■□□ 2.27
CHFR-222ENST00000544093 KAZALD1Q96I82 304 aa29.26■■■□□ 2.27
CHFR-222ENST00000544093 USP44Q9H0E7 712 aa29.26■■■□□ 2.27
CHFR-222ENST00000544093 A0A1B0GUL6 1792 aa29.26■■■□□ 2.27
CHFR-222ENST00000544093 AGBL3Q8NEM8 1001 aa29.25■■■□□ 2.27
CHFR-222ENST00000544093 KCNQ5Q9NR82 932 aa29.25■■■□□ 2.27
CHFR-222ENST00000544093 USP17L3A6NCW0 530 aa29.24■■■□□ 2.27
CHFR-222ENST00000544093 USP17L4A6NCW7 530 aa29.24■■■□□ 2.27
CHFR-222ENST00000544093 USP17L1Q7RTZ2 530 aa29.24■■■□□ 2.27
CHFR-222ENST00000544093 BICC1Q9H694 974 aaKnown RBP29.24■■■□□ 2.27
CHFR-222ENST00000544093 CNNM1Q9NRU3 951 aa29.24■■■□□ 2.27
CHFR-222ENST00000544093 PGAP2Q9UHJ9 254 aa29.24■■■□□ 2.27
CHFR-222ENST00000544093 HDAC5Q9UQL6 1122 aa29.24■■■□□ 2.27
CHFR-222ENST00000544093 TMEM88BA6NKF7 163 aa29.23■■■□□ 2.27
CHFR-222ENST00000544093 RSBN1LQ6PCB5 846 aaPredicted RBP29.23■■■□□ 2.27
CHFR-222ENST00000544093 IPO8O15397 1037 aaKnown RBP29.22■■■□□ 2.27
CHFR-222ENST00000544093 C15orf52Q6ZUT6 534 aaKnown RBP29.22■■■□□ 2.27
CHFR-222ENST00000544093 WTIPA6NIX2 430 aaPredicted RBP29.21■■■□□ 2.27
CHFR-222ENST00000544093 ZBED9Q6R2W3 1325 aa29.2■■■□□ 2.27
CHFR-222ENST00000544093 MYO3BQ8WXR4 1341 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms