RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CCDC77Q9BR77 488 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 CASKIN1Q8WXD9 1431 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 LDHAL6AQ6ZMR3 332 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 CLGNO14967 610 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 PLCB3Q01970 1234 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 ZNF569Q5MCW4 686 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 SLF2Q8IX21 1173 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 ANAPC4Q9UJX5 808 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 STX8Q9UNK0 236 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 ASIC1P78348 528 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 MAP7D1Q3KQU3 841 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 AKNAD1Q5T1N1 836 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 SYT10Q6XYQ8 523 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 STX17P56962 302 aa17.56■□□□□ 0.4
CHD4-210ENST00000544040 FAM200AQ8TCP9 573 aa17.55■□□□□ 0.4
CHD4-210ENST00000544040 MRPS27Q92552 414 aaKnown RBP17.55■□□□□ 0.4
CHD4-210ENST00000544040 NBPF11Q86T75 865 aa17.55■□□□□ 0.4
CHD4-210ENST00000544040 PPP1R9BQ96SB3 815 aa17.55■□□□□ 0.4
CHD4-210ENST00000544040 EBAG9O00559 213 aa17.55■□□□□ 0.4
CHD4-210ENST00000544040 PRIM1P49642 420 aaKnown RBP17.55■□□□□ 0.4
CHD4-210ENST00000544040 Q6ZUG5 572 aa17.55■□□□□ 0.4
CHD4-210ENST00000544040 GTF3C6Q969F1 213 aa17.55■□□□□ 0.4
CHD4-210ENST00000544040 SEC62Q99442 399 aaKnown RBP17.55■□□□□ 0.4
CHD4-210ENST00000544040 STMN4Q9H169 189 aaPredicted RBP17.55■□□□□ 0.4
CHD4-210ENST00000544040 CLCN1P35523 988 aa17.55■□□□□ 0.4
CHD4-210ENST00000544040 CAVIN2O95810 425 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 HMG20BQ9P0W2 317 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 PTPRCP08575 1304 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 UBXN1Q04323 297 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 IFIT1BQ5T764 474 aaKnown RBP17.54■□□□□ 0.4
CHD4-210ENST00000544040 DBF4Q9UBU7 674 aaPredicted RBP17.54■□□□□ 0.4
CHD4-210ENST00000544040 RTL1A6NKG5 1358 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 ZBTB43O43298 467 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 NOL3O60936 208 aaKnown RBP17.54■□□□□ 0.4
CHD4-210ENST00000544040 SDSP20132 328 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 FAM83GA6ND36 823 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 TSPY3P0CV98 308 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 TSPY8P0CW00 308 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 PPARDQ03181 441 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 UBE3BQ7Z3V4 1068 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 KCNH5Q8NCM2 988 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 KCNG4Q8TDN1 519 aa17.54■□□□□ 0.4
CHD4-210ENST00000544040 FAM212AQ96EL1 285 aa17.53■□□□□ 0.4
CHD4-210ENST00000544040 CABP5Q9NP86 173 aa17.53■□□□□ 0.4
CHD4-210ENST00000544040 IRX3P78415 501 aaPredicted RBP17.53■□□□□ 0.4
CHD4-210ENST00000544040 KIF5AQ12840 1032 aa17.53■□□□□ 0.4
CHD4-210ENST00000544040 UBLCP1Q8WVY7 318 aaPredicted RBP17.53■□□□□ 0.4
CHD4-210ENST00000544040 NAA25Q14CX7 972 aa17.53■□□□□ 0.4
CHD4-210ENST00000544040 PLCD3Q8N3E9 789 aa17.53■□□□□ 0.4
CHD4-210ENST00000544040 TTC14Q96N46 770 aa17.53■□□□□ 0.4
CHD4-210ENST00000544040 ANXA1P04083 346 aa17.52■□□□□ 0.4
CHD4-210ENST00000544040 SBNO2Q9Y2G9 1366 aa17.52■□□□□ 0.4
CHD4-210ENST00000544040 CCDC94Q9BW85 323 aaPredicted RBP17.52■□□□□ 0.4
CHD4-210ENST00000544040 ERMNQ8TAM6 284 aa17.52■□□□□ 0.4
CHD4-210ENST00000544040 RTN1Q16799 776 aa17.52■□□□□ 0.39
CHD4-210ENST00000544040 IQSEC3Q9UPP2 1182 aaPredicted RBP17.52■□□□□ 0.39
CHD4-210ENST00000544040 ZKSCAN5Q9Y2L8 839 aa17.52■□□□□ 0.39
CHD4-210ENST00000544040 BAG3O95817 575 aa17.52■□□□□ 0.39
CHD4-210ENST00000544040 NBPF7P0C2Y1 421 aaPredicted RBP17.52■□□□□ 0.39
CHD4-210ENST00000544040 SEPT6Q14141 434 aa17.52■□□□□ 0.39
CHD4-210ENST00000544040 PLS1Q14651 629 aa17.52■□□□□ 0.39
CHD4-210ENST00000544040 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.39
CHD4-210ENST00000544040 CALM1P0DP23 149 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 CALM2P0DP24 149 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 CALM3P0DP25 149 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 PLIN2Q99541 437 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 PSMA7O14818 248 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 AQRO60306 1485 aaKnown RBP eCLIP17.51■□□□□ 0.394e-7■■■■□ 24.4
CHD4-210ENST00000544040 F13A1P00488 732 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 TYRO3Q06418 890 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 KRBA2Q6ZNG9 492 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 CHST3Q7LGC8 479 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 SLC4A4Q9Y6R1 1079 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 CCDC61Q9Y6R9 512 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 PI4KAP2A4QPH2 592 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 ATP2A1O14983 1001 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 KRT86O43790 486 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 KRT83P78385 493 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 PPP1R7Q15435 360 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 RPUSD2Q8IZ73 545 aaKnown RBP17.51■□□□□ 0.39
CHD4-210ENST00000544040 PI4KAP1Q8N8J0 262 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 RBM8AQ9Y5S9 174 aaKnown RBP17.51■□□□□ 0.39
CHD4-210ENST00000544040 CCDC42Q96M95 316 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 SAMD15Q9P1V8 674 aa17.51■□□□□ 0.39
CHD4-210ENST00000544040 HLA-DOAP06340 250 aa17.5■□□□□ 0.39
CHD4-210ENST00000544040 AMOTQ4VCS5 1084 aa17.5■□□□□ 0.39
CHD4-210ENST00000544040 WDR70Q9NW82 654 aa17.5■□□□□ 0.39
CHD4-210ENST00000544040 IFNKQ9P0W0 207 aa17.5■□□□□ 0.39
CHD4-210ENST00000544040 ANKLE2Q86XL3 938 aa17.5■□□□□ 0.39
CHD4-210ENST00000544040 UTP14AQ9BVJ6 771 aaKnown RBP17.5■□□□□ 0.39
CHD4-210ENST00000544040 MBIPQ9NS73 344 aa17.5■□□□□ 0.39
CHD4-210ENST00000544040 ABCC11Q96J66 1382 aa17.5■□□□□ 0.39
CHD4-210ENST00000544040 PRPHP41219 470 aa17.5■□□□□ 0.39
CHD4-210ENST00000544040 NUCB1Q02818 461 aa17.5■□□□□ 0.39
CHD4-210ENST00000544040 UAP1Q16222 522 aaPredicted RBP17.5■□□□□ 0.39
CHD4-210ENST00000544040 TMCO4Q5TGY1 634 aa17.5■□□□□ 0.39
CHD4-210ENST00000544040 CRNKL1Q9BZJ0 848 aaKnown RBP17.5■□□□□ 0.39
CHD4-210ENST00000544040 LRRC45Q96CN5 670 aa17.49■□□□□ 0.39
CHD4-210ENST00000544040 RABEP2Q9H5N1 569 aa17.49■□□□□ 0.39
CHD4-210ENST00000544040 FAM76AQ8TAV0 307 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms