RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 SF3B3Q15393 1217 aaKnown RBP23.95■■□□□ 1.42
RAP1B-229ENST00000543393 FAM89AQ96GI7 184 aa23.95■■□□□ 1.42
RAP1B-229ENST00000543393 EYA3Q99504 573 aa23.95■■□□□ 1.42
RAP1B-229ENST00000543393 ASTN2O75129 1339 aaPredicted RBP23.94■■□□□ 1.42
RAP1B-229ENST00000543393 PRPF38BQ5VTL8 546 aaKnown RBP23.93■■□□□ 1.42
RAP1B-229ENST00000543393 TBC1D16Q8TBP0 767 aa23.93■■□□□ 1.42
RAP1B-229ENST00000543393 CDCA5Q96FF9 252 aa23.93■■□□□ 1.42
RAP1B-229ENST00000543393 VIL1P09327 827 aaKnown RBP23.92■■□□□ 1.42
RAP1B-229ENST00000543393 KRT24Q2M2I5 525 aa23.91■■□□□ 1.42
RAP1B-229ENST00000543393 RASAL3Q86YV0 1011 aa23.91■■□□□ 1.42
RAP1B-229ENST00000543393 REM2Q8IYK8 340 aaPredicted RBP23.91■■□□□ 1.42
RAP1B-229ENST00000543393 PLBD2Q8NHP8 589 aa23.91■■□□□ 1.42
RAP1B-229ENST00000543393 ISCA1Q9BUE6 129 aa23.91■■□□□ 1.42
RAP1B-229ENST00000543393 CHPF2Q9P2E5 772 aa23.91■■□□□ 1.42
RAP1B-229ENST00000543393 ATP5J2-PTCD1G3V325 749 aa23.9■■□□□ 1.42
RAP1B-229ENST00000543393 RTL5Q5HYW3 569 aaPredicted RBP23.9■■□□□ 1.42
RAP1B-229ENST00000543393 ANKRD13DQ6ZTN6 518 aa23.9■■□□□ 1.42
RAP1B-229ENST00000543393 ZC3H12CQ9C0D7 883 aaKnown RBP23.9■■□□□ 1.42
RAP1B-229ENST00000543393 ANGEL2Q5VTE6 544 aaKnown RBP23.89■■□□□ 1.41
RAP1B-229ENST00000543393 HPS5Q9UPZ3 1129 aa23.89■■□□□ 1.41
RAP1B-229ENST00000543393 TMPOP42166 694 aaKnown RBP23.88■■□□□ 1.41
RAP1B-229ENST00000543393 RPS8P62241 208 aaKnown RBP23.88■■□□□ 1.41
RAP1B-229ENST00000543393 LMOD3Q0VAK6 560 aa23.88■■□□□ 1.41
RAP1B-229ENST00000543393 SCARF1Q14162 830 aa23.88■■□□□ 1.41
RAP1B-229ENST00000543393 G3V3G9 751 aa23.87■■□□□ 1.41
RAP1B-229ENST00000543393 IRS4O14654 1257 aaPredicted RBP23.87■■□□□ 1.41
RAP1B-229ENST00000543393 ZNF280AP59817 542 aaPredicted RBP23.87■■□□□ 1.41
RAP1B-229ENST00000543393 DCAF8Q5TAQ9 597 aa23.87■■□□□ 1.41
RAP1B-229ENST00000543393 PODXL2Q9NZ53 605 aa23.87■■□□□ 1.41
RAP1B-229ENST00000543393 PAPPA2Q9BXP8 1791 aa23.87■■□□□ 1.41
RAP1B-229ENST00000543393 FKBP1BP68106 108 aa23.86■■□□□ 1.41
RAP1B-229ENST00000543393 UFL1O94874 794 aa23.85■■□□□ 1.41
RAP1B-229ENST00000543393 PKN2Q16513 984 aaKnown RBP23.85■■□□□ 1.41
RAP1B-229ENST00000543393 HDGFL1Q5TGJ6 251 aa23.85■■□□□ 1.41
RAP1B-229ENST00000543393 RSBN1LQ6PCB5 846 aaPredicted RBP23.85■■□□□ 1.41
RAP1B-229ENST00000543393 AGBL3Q8NEM8 1001 aa23.85■■□□□ 1.41
RAP1B-229ENST00000543393 ZNF609O15014 1411 aa23.84■■□□□ 1.41
RAP1B-229ENST00000543393 PSME4Q14997 1843 aa23.84■■□□□ 1.41
RAP1B-229ENST00000543393 CHL1O00533 1208 aa23.84■■□□□ 1.41
RAP1B-229ENST00000543393 ZNF296Q8WUU4 475 aaPredicted RBP23.84■■□□□ 1.41
RAP1B-229ENST00000543393 ANKIB1Q9P2G1 1089 aa23.84■■□□□ 1.41
RAP1B-229ENST00000543393 HDAC9Q9UKV0 1011 aa23.84■■□□□ 1.41
RAP1B-229ENST00000543393 TBC1D8O95759 1140 aa23.83■■□□□ 1.41
RAP1B-229ENST00000543393 MOB2Q70IA6 237 aa23.83■■□□□ 1.41
RAP1B-229ENST00000543393 SEC31BQ9NQW1 1179 aa23.83■■□□□ 1.41
RAP1B-229ENST00000543393 DBF4Q9UBU7 674 aaPredicted RBP23.83■■□□□ 1.41
RAP1B-229ENST00000543393 GGA1Q9UJY5 639 aa23.83■■□□□ 1.41
RAP1B-229ENST00000543393 MYOZ2Q9NPC6 264 aa23.82■■□□□ 1.4
RAP1B-229ENST00000543393 SCAF8Q9UPN6 1271 aaKnown RBP23.82■■□□□ 1.4
RAP1B-229ENST00000543393 LAS1LQ9Y4W2 734 aaKnown RBP23.82■■□□□ 1.4
RAP1B-229ENST00000543393 PITPNM2Q9BZ72 1349 aa23.82■■□□□ 1.4
RAP1B-229ENST00000543393 USP17L8P0C7I0 530 aa23.81■■□□□ 1.4
RAP1B-229ENST00000543393 TRIM28Q13263 835 aaKnown RBP23.81■■□□□ 1.4
RAP1B-229ENST00000543393 NEUROD2Q15784 382 aa23.81■■□□□ 1.4
RAP1B-229ENST00000543393 GMLQ99445 158 aa23.81■■□□□ 1.4
RAP1B-229ENST00000543393 UBE2Q2LH0YL09 131 aa23.8■■□□□ 1.4
RAP1B-229ENST00000543393 PRAMEF18Q5VWM3 479 aa23.79■■□□□ 1.4
RAP1B-229ENST00000543393 ZBTB38Q8NAP3 1195 aaPredicted RBP23.79■■□□□ 1.4
RAP1B-229ENST00000543393 HYPKQ9NX55 129 aa23.79■■□□□ 1.4
RAP1B-229ENST00000543393 HOXB7P09629 217 aa23.78■■□□□ 1.4
RAP1B-229ENST00000543393 TM4SF4P48230 202 aa23.77■■□□□ 1.4
RAP1B-229ENST00000543393 USP17L3A6NCW0 530 aa23.76■■□□□ 1.39
RAP1B-229ENST00000543393 USP17L4A6NCW7 530 aa23.76■■□□□ 1.39
RAP1B-229ENST00000543393 GPR25O00155 361 aa23.76■■□□□ 1.39
RAP1B-229ENST00000543393 USP17L1Q7RTZ2 530 aa23.76■■□□□ 1.39
RAP1B-229ENST00000543393 HSP90B1P14625 803 aaKnown RBP23.75■■□□□ 1.39
RAP1B-229ENST00000543393 TTLL12Q14166 644 aaPredicted RBP23.75■■□□□ 1.39
RAP1B-229ENST00000543393 NBPF9Q3BBW0 867 aa23.75■■□□□ 1.39
RAP1B-229ENST00000543393 CCDC152Q4G0S7 254 aa23.75■■□□□ 1.39
RAP1B-229ENST00000543393 NOM1Q5C9Z4 860 aaKnown RBP23.75■■□□□ 1.39
RAP1B-229ENST00000543393 FBXO46Q6PJ61 603 aaPredicted RBP23.75■■□□□ 1.39
RAP1B-229ENST00000543393 RIC3Q7Z5B4 369 aa23.75■■□□□ 1.39
RAP1B-229ENST00000543393 PODNQ7Z5L7 613 aa23.75■■□□□ 1.39
RAP1B-229ENST00000543393 CCDC146Q8IYE0 955 aa23.75■■□□□ 1.39
RAP1B-229ENST00000543393 CCDC85AQ96PX6 553 aaPredicted RBP23.75■■□□□ 1.39
RAP1B-229ENST00000543393 TRIM35Q9UPQ4 493 aa23.75■■□□□ 1.39
RAP1B-229ENST00000543393 XDHP47989 1333 aa23.75■■□□□ 1.39
RAP1B-229ENST00000543393 MKRN3Q13064 507 aaKnown RBP23.74■■□□□ 1.39
RAP1B-229ENST00000543393 DUSP27Q5VZP5 1158 aa23.73■■□□□ 1.39
RAP1B-229ENST00000543393 PDE8AO60658 829 aa23.72■■□□□ 1.39
RAP1B-229ENST00000543393 ATP2B4P23634 1241 aa23.72■■□□□ 1.39
RAP1B-229ENST00000543393 GOLGA2Q08379 1002 aa23.72■■□□□ 1.39
RAP1B-229ENST00000543393 PCCAP05165 728 aaPredicted RBP23.71■■□□□ 1.39
RAP1B-229ENST00000543393 SREBF2Q12772 1141 aa23.71■■□□□ 1.39
RAP1B-229ENST00000543393 ANKRD18AQ8IVF6 992 aa23.71■■□□□ 1.39
RAP1B-229ENST00000543393 JARID2Q92833 1246 aaPredicted RBP23.71■■□□□ 1.39
RAP1B-229ENST00000543393 MYD88Q99836 296 aa23.71■■□□□ 1.39
RAP1B-229ENST00000543393 WNT10BO00744 389 aa23.7■■□□□ 1.38
RAP1B-229ENST00000543393 FKTNO75072 461 aa23.7■■□□□ 1.38
RAP1B-229ENST00000543393 NF2P35240 595 aa23.7■■□□□ 1.38
RAP1B-229ENST00000543393 CCDC191Q8NCU4 936 aa23.7■■□□□ 1.38
RAP1B-229ENST00000543393 MXD3Q9BW11 206 aa23.7■■□□□ 1.38
RAP1B-229ENST00000543393 R3HDMLQ9H3Y0 253 aa23.7■■□□□ 1.38
RAP1B-229ENST00000543393 PHAXQ9H814 394 aaKnown RBP23.7■■□□□ 1.38
RAP1B-229ENST00000543393 ZNF646O15015 1829 aaPredicted RBP23.69■■□□□ 1.38
RAP1B-229ENST00000543393 WTIPA6NIX2 430 aaPredicted RBP23.69■■□□□ 1.38
RAP1B-229ENST00000543393 OGFOD1Q8N543 542 aa23.69■■□□□ 1.38
RAP1B-229ENST00000543393 GCC1Q96CN9 775 aa23.69■■□□□ 1.38
RAP1B-229ENST00000543393 CFHR5Q9BXR6 569 aa23.69■■□□□ 1.38
RAP1B-229ENST00000543393 MKI67P46013 3256 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms