RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
TNFRSF1A-215ENST00000543359 USP50Q70EL3 339 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-215ENST00000543359 ANKRD18AQ8IVF6 992 aa16.73■□□□□ 0.27
TNFRSF1A-215ENST00000543359 CNTROBQ8N137 903 aa16.73■□□□□ 0.27
TNFRSF1A-215ENST00000543359 DBNDD1Q9H9R9 158 aa16.73■□□□□ 0.27
TNFRSF1A-215ENST00000543359 CREBZFQ9NS37 354 aa16.73■□□□□ 0.27
TNFRSF1A-215ENST00000543359 SCN9AQ15858 1988 aa16.73■□□□□ 0.27
TNFRSF1A-215ENST00000543359 TNIP1Q15025 636 aa16.72■□□□□ 0.27
TNFRSF1A-215ENST00000543359 DOK7Q18PE1 504 aa16.72■□□□□ 0.27
TNFRSF1A-215ENST00000543359 TRMT2AQ8IZ69 625 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-215ENST00000543359 ADARB2Q9NS39 739 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-215ENST00000543359 BSDC1Q9NW68 430 aaPredicted RBP16.72■□□□□ 0.27
TNFRSF1A-215ENST00000543359 MINPP1Q9UNW1 487 aa16.72■□□□□ 0.27
TNFRSF1A-215ENST00000543359 SHTN1A0MZ66 631 aa16.71■□□□□ 0.27
TNFRSF1A-215ENST00000543359 E9PSI1 815 aa16.71■□□□□ 0.27
TNFRSF1A-215ENST00000543359 PSMD14O00487 310 aa16.71■□□□□ 0.27
TNFRSF1A-215ENST00000543359 ECE2O60344 883 aa16.71■□□□□ 0.27
TNFRSF1A-215ENST00000543359 UFL1O94874 794 aa16.71■□□□□ 0.27
TNFRSF1A-215ENST00000543359 HIRAP54198 1017 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF1A-215ENST00000543359 CDC5LQ99459 802 aaKnown RBP16.71■□□□□ 0.27
TNFRSF1A-215ENST00000543359 EYA3Q99504 573 aa16.71■□□□□ 0.27
TNFRSF1A-215ENST00000543359 ANKIB1Q9P2G1 1089 aa16.71■□□□□ 0.27
TNFRSF1A-215ENST00000543359 PGAP2Q9UHJ9 254 aa16.71■□□□□ 0.27
TNFRSF1A-215ENST00000543359 GGA1Q9UJY5 639 aa16.71■□□□□ 0.27
TNFRSF1A-215ENST00000543359 XDHP47989 1333 aa16.7■□□□□ 0.26
TNFRSF1A-215ENST00000543359 FOXO4P98177 505 aa16.7■□□□□ 0.26
TNFRSF1A-215ENST00000543359 MRPL50Q8N5N7 158 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-215ENST00000543359 CDCA7LQ96GN5 454 aa16.7■□□□□ 0.26
TNFRSF1A-215ENST00000543359 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
TNFRSF1A-215ENST00000543359 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1A-215ENST00000543359 SPEF2Q9C093 1822 aa16.69■□□□□ 0.26
TNFRSF1A-215ENST00000543359 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
TNFRSF1A-215ENST00000543359 DPF2Q92785 391 aa16.69■□□□□ 0.26
TNFRSF1A-215ENST00000543359 CNOT7Q9UIV1 285 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1A-215ENST00000543359 VIL1P09327 827 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1A-215ENST00000543359 ITGA6P23229 1130 aa16.68■□□□□ 0.26
TNFRSF1A-215ENST00000543359 ATP2B4P23634 1241 aa16.68■□□□□ 0.26
TNFRSF1A-215ENST00000543359 FMR1Q06787 632 aaKnown RBP eCLIP16.68■□□□□ 0.26
TNFRSF1A-215ENST00000543359 EPHA10Q5JZY3 1008 aa16.68■□□□□ 0.26
TNFRSF1A-215ENST00000543359 TRPM4Q8TD43 1214 aa16.68■□□□□ 0.26
TNFRSF1A-215ENST00000543359 BCL2L13Q9BXK5 485 aa16.68■□□□□ 0.26
TNFRSF1A-215ENST00000543359 TMEM88BA6NKF7 163 aa16.67■□□□□ 0.26
TNFRSF1A-215ENST00000543359 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
TNFRSF1A-215ENST00000543359 SSH1Q8WYL5 1049 aa16.67■□□□□ 0.26
TNFRSF1A-215ENST00000543359 CNTNAP1P78357 1384 aa16.66■□□□□ 0.26
TNFRSF1A-215ENST00000543359 PSME4Q14997 1843 aa16.66■□□□□ 0.26
TNFRSF1A-215ENST00000543359 GRM8O00222 908 aa16.66■□□□□ 0.26
TNFRSF1A-215ENST00000543359 EGFRP00533 1210 aa16.66■□□□□ 0.26
TNFRSF1A-215ENST00000543359 MICALL2Q8IY33 904 aa16.66■□□□□ 0.26
TNFRSF1A-215ENST00000543359 ZC3H15Q8WU90 426 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1A-215ENST00000543359 KAZALD1Q96I82 304 aa16.66■□□□□ 0.26
TNFRSF1A-215ENST00000543359 ZNF609O15014 1411 aa16.65■□□□□ 0.26
TNFRSF1A-215ENST00000543359 TRAF5O00463 557 aa16.65■□□□□ 0.26
TNFRSF1A-215ENST00000543359 RPS12P25398 132 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-215ENST00000543359 CCT4P50991 539 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-215ENST00000543359 CST9Q5W186 159 aa16.65■□□□□ 0.26
TNFRSF1A-215ENST00000543359 TXNRD3Q86VQ6 643 aa16.65■□□□□ 0.26
TNFRSF1A-215ENST00000543359 GMLQ99445 158 aa16.65■□□□□ 0.26
TNFRSF1A-215ENST00000543359 MKRN1Q9UHC7 482 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1A-215ENST00000543359 MED23Q9ULK4 1368 aa16.64■□□□□ 0.26
TNFRSF1A-215ENST00000543359 H7C1D1 291 aa16.64■□□□□ 0.25
TNFRSF1A-215ENST00000543359 IGHMBP2P38935 993 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1A-215ENST00000543359 SAMD7Q7Z3H4 446 aa16.64■□□□□ 0.25
TNFRSF1A-215ENST00000543359 PODNQ7Z5L7 613 aa16.64■□□□□ 0.25
TNFRSF1A-215ENST00000543359 SRCIN1Q9C0H9 1055 aa16.64■□□□□ 0.25
TNFRSF1A-215ENST00000543359 UTYO14607 1347 aa16.64■□□□□ 0.25
TNFRSF1A-215ENST00000543359 ZNF646O15015 1829 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1A-215ENST00000543359 TRPM7Q96QT4 1865 aa16.63■□□□□ 0.25
TNFRSF1A-215ENST00000543359 RASSF10A6NK89 507 aa16.63■□□□□ 0.25
TNFRSF1A-215ENST00000543359 SLC4A10Q6U841 1118 aa16.63■□□□□ 0.25
TNFRSF1A-215ENST00000543359 LMBR1LQ6UX01 489 aa16.63■□□□□ 0.25
TNFRSF1A-215ENST00000543359 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
TNFRSF1A-215ENST00000543359 IRS2Q9Y4H2 1338 aa16.63■□□□□ 0.25
TNFRSF1A-215ENST00000543359 POLR2AP24928 1970 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 ANKRD18BA2A2Z9 1011 aa16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 NBPF7P0C2Y1 421 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 KLRK1P26718 216 aa16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 VEGFBP49765 207 aa16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 CHRNDQ07001 517 aa16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 RSBN1LQ6PCB5 846 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 MPHOSPH8Q99549 860 aa16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 GLIS2Q9BZE0 524 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 ANKRD2Q9GZV1 360 aa16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 C9orf78Q9NZ63 289 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 PTPRCP08575 1304 aa16.62■□□□□ 0.25
TNFRSF1A-215ENST00000543359 SNAP23O00161 211 aa16.61■□□□□ 0.25
TNFRSF1A-215ENST00000543359 ZNF280AP59817 542 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF1A-215ENST00000543359 IFIT5Q13325 482 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1A-215ENST00000543359 ALDH1L2Q3SY69 923 aa16.61■□□□□ 0.25
TNFRSF1A-215ENST00000543359 TBC1D10BQ4KMP7 808 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF1A-215ENST00000543359 AGBL3Q8NEM8 1001 aa16.61■□□□□ 0.25
TNFRSF1A-215ENST00000543359 SUCLG2Q96I99 432 aa16.61■□□□□ 0.25
TNFRSF1A-215ENST00000543359 ZNF804BA4D1E1 1349 aa16.61■□□□□ 0.25
TNFRSF1A-215ENST00000543359 A0A1B0GUL6 1792 aa16.61■□□□□ 0.25
TNFRSF1A-215ENST00000543359 USP17L3A6NCW0 530 aa16.6■□□□□ 0.25
TNFRSF1A-215ENST00000543359 USP17L4A6NCW7 530 aa16.6■□□□□ 0.25
TNFRSF1A-215ENST00000543359 DACT2Q5SW24 774 aa16.6■□□□□ 0.25
TNFRSF1A-215ENST00000543359 DLK2Q6UY11 383 aa16.6■□□□□ 0.25
TNFRSF1A-215ENST00000543359 USP17L1Q7RTZ2 530 aa16.6■□□□□ 0.25
TNFRSF1A-215ENST00000543359 ZNF594Q96JF6 807 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms