RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-210ENST00000541157 KHSRPQ92945 711 aaKnown RBP eCLIP12.38□□□□□ -0.431e-9■□□□□ 10
MRE11-210ENST00000541157 LRRCC1Q9C099 1032 aa12.38□□□□□ -0.43
MRE11-210ENST00000541157 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
MRE11-210ENST00000541157 RFX5P48382 616 aaPredicted RBP12.37□□□□□ -0.43
MRE11-210ENST00000541157 CAMK2BQ13554 666 aa12.37□□□□□ -0.43
MRE11-210ENST00000541157 RTL5Q5HYW3 569 aaPredicted RBP12.37□□□□□ -0.43
MRE11-210ENST00000541157 LMBR1LQ6UX01 489 aa12.37□□□□□ -0.43
MRE11-210ENST00000541157 AMIGO3Q86WK7 504 aa12.37□□□□□ -0.43
MRE11-210ENST00000541157 OXER1Q8TDS5 423 aa12.37□□□□□ -0.43
MRE11-210ENST00000541157 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
MRE11-210ENST00000541157 FAM89AQ96GI7 184 aa12.37□□□□□ -0.43
MRE11-210ENST00000541157 BCL2L12Q9HB09 334 aa12.37□□□□□ -0.43
MRE11-210ENST00000541157 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
MRE11-210ENST00000541157 TRMT112Q9UI30 125 aaKnown RBP12.37□□□□□ -0.43
MRE11-210ENST00000541157 NIP7Q9Y221 180 aaKnown RBP eCLIP12.37□□□□□ -0.43
MRE11-210ENST00000541157 UBR3Q6ZT12 1888 aa12.37□□□□□ -0.43
MRE11-210ENST00000541157 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
MRE11-210ENST00000541157 E2F4Q16254 413 aa12.36□□□□□ -0.43
MRE11-210ENST00000541157 SUSD4Q5VX71 490 aa12.36□□□□□ -0.43
MRE11-210ENST00000541157 USPL1Q5W0Q7 1092 aa12.36□□□□□ -0.43
MRE11-210ENST00000541157 SMIM5Q71RC9 77 aa12.36□□□□□ -0.43
MRE11-210ENST00000541157 ERC1Q8IUD2 1116 aa12.36□□□□□ -0.43
MRE11-210ENST00000541157 RHPN1Q8TCX5 695 aa12.36□□□□□ -0.43
MRE11-210ENST00000541157 ARHGEF1Q92888 912 aaKnown RBP12.36□□□□□ -0.43
MRE11-210ENST00000541157 KIF1BPQ96EK5 621 aa12.36□□□□□ -0.43
MRE11-210ENST00000541157 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
MRE11-210ENST00000541157 COPRSQ9NQ92 184 aa12.36□□□□□ -0.43
MRE11-210ENST00000541157 COL24A1Q17RW2 1714 aa12.36□□□□□ -0.43
MRE11-210ENST00000541157 SH3TC1Q8TE82 1336 aa12.36□□□□□ -0.43
MRE11-210ENST00000541157 IRS4O14654 1257 aaPredicted RBP12.35□□□□□ -0.43
MRE11-210ENST00000541157 ZPR1O75312 459 aa12.35□□□□□ -0.43
MRE11-210ENST00000541157 NTSR2O95665 410 aa12.35□□□□□ -0.43
MRE11-210ENST00000541157 OS9Q13438 667 aaPredicted RBP12.35□□□□□ -0.43
MRE11-210ENST00000541157 TRAPPC3LQ5T215 181 aa12.35□□□□□ -0.43
MRE11-210ENST00000541157 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
MRE11-210ENST00000541157 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
MRE11-210ENST00000541157 PA2G4Q9UQ80 394 aaKnown RBP12.35□□□□□ -0.43
MRE11-210ENST00000541157 LAMB2P55268 1798 aa12.35□□□□□ -0.43
MRE11-210ENST00000541157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.34□□□□□ -0.43
MRE11-210ENST00000541157 TBC1D12O60347 775 aa12.34□□□□□ -0.43
MRE11-210ENST00000541157 PHF14O94880 888 aa12.34□□□□□ -0.43
MRE11-210ENST00000541157 CSF1RP07333 972 aa12.34□□□□□ -0.43
MRE11-210ENST00000541157 SSFA2P28290 1259 aa12.34□□□□□ -0.43
MRE11-210ENST00000541157 RFC4P35249 363 aa12.34□□□□□ -0.43
MRE11-210ENST00000541157 PTPN12Q05209 780 aaKnown RBP12.34□□□□□ -0.43
MRE11-210ENST00000541157 FAM161AQ3B820 660 aa12.34□□□□□ -0.43
MRE11-210ENST00000541157 C16orf71Q8IYS4 520 aaPredicted RBP12.34□□□□□ -0.43
MRE11-210ENST00000541157 SYNE4Q8N205 404 aa12.34□□□□□ -0.43
MRE11-210ENST00000541157 OTUD7AQ8TE49 926 aaPredicted RBP12.34□□□□□ -0.43
MRE11-210ENST00000541157 SALL3Q9BXA9 1300 aa12.34□□□□□ -0.43
MRE11-210ENST00000541157 PDE8AO60658 829 aa12.33□□□□□ -0.44
MRE11-210ENST00000541157 NUDT7P0C024 238 aa12.33□□□□□ -0.44
MRE11-210ENST00000541157 HSP90B1P14625 803 aaKnown RBP12.33□□□□□ -0.44
MRE11-210ENST00000541157 EMP3P54852 163 aa12.33□□□□□ -0.44
MRE11-210ENST00000541157 CTSWP56202 376 aa12.33□□□□□ -0.44
MRE11-210ENST00000541157 G3BP1Q13283 466 aaKnown RBP eCLIP12.33□□□□□ -0.44
MRE11-210ENST00000541157 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
MRE11-210ENST00000541157 BMP2KLQ5H9B9 411 aa12.33□□□□□ -0.44
MRE11-210ENST00000541157 TBC1D9BQ66K14 1250 aa12.33□□□□□ -0.44
MRE11-210ENST00000541157 KLHDC4Q8TBB5 520 aa12.33□□□□□ -0.44
MRE11-210ENST00000541157 BACH2Q9BYV9 841 aa12.33□□□□□ -0.44
MRE11-210ENST00000541157 CHMP3Q9Y3E7 222 aa12.33□□□□□ -0.44
MRE11-210ENST00000541157 DDX60Q8IY21 1712 aaKnown RBP12.32□□□□□ -0.44
MRE11-210ENST00000541157 TTLL11Q8NHH1 800 aa12.32□□□□□ -0.44
MRE11-210ENST00000541157 SIL1Q9H173 461 aa12.32□□□□□ -0.44
MRE11-210ENST00000541157 OSBPL3Q9H4L5 887 aa12.32□□□□□ -0.44
MRE11-210ENST00000541157 IL1RAPL2Q9NP60 686 aa12.32□□□□□ -0.44
MRE11-210ENST00000541157 AOX1Q06278 1338 aa12.32□□□□□ -0.44
MRE11-210ENST00000541157 MYH3P11055 1940 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 LRP5O75197 1615 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 FAM177BA6PVY3 158 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 CIAO1O76071 339 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 SASH1O94885 1247 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 MX1P20591 662 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 PDE1AP54750 535 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 MAP3K9P80192 1104 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 ZNF827Q17R98 1081 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 CCDC57Q2TAC2 916 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 TTC22Q5TAA0 569 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 SETDB2Q96T68 719 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 STAP2Q9UGK3 403 aa12.31□□□□□ -0.44
MRE11-210ENST00000541157 RTL9Q8NET4 1388 aa12.3□□□□□ -0.44
MRE11-210ENST00000541157 EYA2O00167 538 aa12.3□□□□□ -0.44
MRE11-210ENST00000541157 HCLS1P14317 486 aaPredicted RBP12.3□□□□□ -0.44
MRE11-210ENST00000541157 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
MRE11-210ENST00000541157 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
MRE11-210ENST00000541157 ATG9AQ7Z3C6 839 aa12.3□□□□□ -0.44
MRE11-210ENST00000541157 CLASRPQ8N2M8 674 aaKnown RBP12.3□□□□□ -0.44
MRE11-210ENST00000541157 CAMKK2Q96RR4 588 aa12.3□□□□□ -0.44
MRE11-210ENST00000541157 NYXQ9GZU5 481 aa12.3□□□□□ -0.44
MRE11-210ENST00000541157 BCL11AQ9H165 835 aa12.3□□□□□ -0.44
MRE11-210ENST00000541157 CARMIL3Q8ND23 1372 aa12.3□□□□□ -0.44
MRE11-210ENST00000541157 POTEMA6NI47 508 aa12.29□□□□□ -0.44
MRE11-210ENST00000541157 DPYSL4O14531 572 aa12.29□□□□□ -0.44
MRE11-210ENST00000541157 GYS1P13807 737 aa12.29□□□□□ -0.44
MRE11-210ENST00000541157 GSPT1P15170 499 aaKnown RBP12.29□□□□□ -0.44
MRE11-210ENST00000541157 IL15P40933 162 aaPredicted RBP12.29□□□□□ -0.44
MRE11-210ENST00000541157 NFIXQ14938 502 aa12.29□□□□□ -0.44
MRE11-210ENST00000541157 ERFEQ4G0M1 354 aa12.29□□□□□ -0.44
MRE11-210ENST00000541157 SLC10A5Q5PT55 438 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms