RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 MTX1Q13505 466 aa14.65□□□□□ -0.06
CYB561A3-215ENST00000540317 CASC1Q6TDU7 716 aa14.65□□□□□ -0.06
CYB561A3-215ENST00000540317 DDX46Q7L014 1031 aaKnown RBP14.65□□□□□ -0.06
CYB561A3-215ENST00000540317 ISCA1Q9BUE6 129 aa14.65□□□□□ -0.06
CYB561A3-215ENST00000540317 C9orf78Q9NZ63 289 aaPredicted RBP14.65□□□□□ -0.06
CYB561A3-215ENST00000540317 UTYO14607 1347 aa14.64□□□□□ -0.07
CYB561A3-215ENST00000540317 DDNO94850 711 aaPredicted RBP14.64□□□□□ -0.07
CYB561A3-215ENST00000540317 FER1L6Q2WGJ9 1857 aa14.64□□□□□ -0.07
CYB561A3-215ENST00000540317 TNRC6CQ9HCJ0 1690 aaKnown RBP14.64□□□□□ -0.07
CYB561A3-215ENST00000540317 CCDC88AQ3V6T2 1871 aa14.64□□□□□ -0.07
CYB561A3-215ENST00000540317 IARSP41252 1262 aaKnown RBP14.64□□□□□ -0.07
CYB561A3-215ENST00000540317 RBM25P49756 843 aaKnown RBP14.64□□□□□ -0.07
CYB561A3-215ENST00000540317 GRIPAP1Q4V328 841 aa14.64□□□□□ -0.07
CYB561A3-215ENST00000540317 JDP2Q8WYK2 163 aa14.64□□□□□ -0.07
CYB561A3-215ENST00000540317 PSMD1Q99460 953 aa14.64□□□□□ -0.07
CYB561A3-215ENST00000540317 MYD88Q99836 296 aa14.64□□□□□ -0.07
CYB561A3-215ENST00000540317 AOX1Q06278 1338 aa14.63□□□□□ -0.07
CYB561A3-215ENST00000540317 BBOX1O75936 387 aa14.63□□□□□ -0.07
CYB561A3-215ENST00000540317 NBPF7P0C2Y1 421 aaPredicted RBP14.63□□□□□ -0.07
CYB561A3-215ENST00000540317 GSPT1P15170 499 aaKnown RBP14.63□□□□□ -0.07
CYB561A3-215ENST00000540317 TRIM28Q13263 835 aaKnown RBP14.63□□□□□ -0.07
CYB561A3-215ENST00000540317 TBC1D9Q6ZT07 1266 aa14.63□□□□□ -0.07
CYB561A3-215ENST00000540317 EXOC6BQ9Y2D4 811 aa14.63□□□□□ -0.07
CYB561A3-215ENST00000540317 SMARCA5O60264 1052 aaPredicted RBP14.62□□□□□ -0.07
CYB561A3-215ENST00000540317 FSTL1Q12841 308 aa14.62□□□□□ -0.07
CYB561A3-215ENST00000540317 METTL22Q9BUU2 404 aaPredicted RBP14.62□□□□□ -0.07
CYB561A3-215ENST00000540317 ATP6V0A2Q9Y487 856 aa14.62□□□□□ -0.07
CYB561A3-215ENST00000540317 POTECB2RU33 542 aa14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 APBB1O00213 710 aa14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 GRM8O00222 908 aa14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 IRS4O14654 1257 aaPredicted RBP14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 SRGAP3O43295 1099 aa14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 PDE1AP54750 535 aa14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 SLC51AQ86UW1 340 aa14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 LARGE2Q8N3Y3 721 aa14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 SMC1BQ8NDV3 1235 aa14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 KIF1BPQ96EK5 621 aa14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 STAP2Q9UGK3 403 aa14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 ARFGEF2Q9Y6D5 1785 aa14.61□□□□□ -0.07
CYB561A3-215ENST00000540317 APLP1P51693 650 aa14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 ZBTB38Q8NAP3 1195 aaPredicted RBP14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 CCDC191Q8NCU4 936 aa14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 CEP350Q5VT06 3117 aa14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 SALL3Q9BXA9 1300 aa14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 SURF6O75683 361 aaKnown RBP14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 HSP90B1P14625 803 aaKnown RBP14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 GRAPQ13588 217 aa14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 ERC1Q8IUD2 1116 aa14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 SP8Q8IXZ3 490 aa14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 GRAPLQ8TC17 118 aaPredicted RBP14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 CWC25Q9NXE8 425 aaPredicted RBP14.6□□□□□ -0.07
CYB561A3-215ENST00000540317 TIAM2Q8IVF5 1701 aa14.59□□□□□ -0.07
CYB561A3-215ENST00000540317 NEURL1BA8MQ27 555 aa14.59□□□□□ -0.07
CYB561A3-215ENST00000540317 FZD9O00144 591 aa14.59□□□□□ -0.07
CYB561A3-215ENST00000540317 SDSP20132 328 aa14.59□□□□□ -0.07
CYB561A3-215ENST00000540317 MX1P20591 662 aa14.59□□□□□ -0.07
CYB561A3-215ENST00000540317 SF3B3Q15393 1217 aaKnown RBP14.59□□□□□ -0.07
CYB561A3-215ENST00000540317 DPP8Q6V1X1 898 aaPredicted RBP14.59□□□□□ -0.07
CYB561A3-215ENST00000540317 MPNDQ8N594 471 aa14.59□□□□□ -0.07
CYB561A3-215ENST00000540317 JARID2Q92833 1246 aaPredicted RBP14.59□□□□□ -0.07
CYB561A3-215ENST00000540317 ZNF541Q9H0D2 1346 aa14.58□□□□□ -0.08
CYB561A3-215ENST00000540317 IQCA1LA6NCM1 817 aa14.58□□□□□ -0.08
CYB561A3-215ENST00000540317 PPIP5K2O43314 1243 aa14.58□□□□□ -0.08
CYB561A3-215ENST00000540317 EIF6P56537 245 aaKnown RBP14.58□□□□□ -0.08
CYB561A3-215ENST00000540317 CWF19L2Q2TBE0 894 aaKnown RBP14.58□□□□□ -0.08
CYB561A3-215ENST00000540317 SUPT20HQ8NEM7 779 aa14.58□□□□□ -0.08
CYB561A3-215ENST00000540317 RHPN1Q8TCX5 695 aa14.58□□□□□ -0.08
CYB561A3-215ENST00000540317 OTUD7AQ8TE49 926 aaPredicted RBP14.58□□□□□ -0.08
CYB561A3-215ENST00000540317 ANKRD36CQ5JPF3 1778 aa14.58□□□□□ -0.08
CYB561A3-215ENST00000540317 PCCAP05165 728 aaPredicted RBP14.57□□□□□ -0.08
CYB561A3-215ENST00000540317 IGKV5-2P06315 115 aa14.57□□□□□ -0.08
CYB561A3-215ENST00000540317 GCKRQ14397 625 aa14.57□□□□□ -0.08
CYB561A3-215ENST00000540317 AOC3Q16853 763 aa14.57□□□□□ -0.08
CYB561A3-215ENST00000540317 NIM1KQ8IY84 436 aa14.57□□□□□ -0.08
CYB561A3-215ENST00000540317 GJA3Q9Y6H8 435 aa14.57□□□□□ -0.08
CYB561A3-215ENST00000540317 DICER1Q9UPY3 1922 aaKnown RBP14.57□□□□□ -0.08
CYB561A3-215ENST00000540317 SNED1Q8TER0 1413 aa14.57□□□□□ -0.08
CYB561A3-215ENST00000540317 TMC4Q7Z404 712 aa14.56□□□□□ -0.08
CYB561A3-215ENST00000540317 GPC2Q8N158 579 aa14.56□□□□□ -0.08
CYB561A3-215ENST00000540317 CELF1Q92879 486 aaKnown RBP14.56□□□□□ -0.08
CYB561A3-215ENST00000540317 L3MBTL3Q96JM7 780 aaPredicted RBP14.56□□□□□ -0.08
CYB561A3-215ENST00000540317 PDE8AO60658 829 aa14.56□□□□□ -0.08
CYB561A3-215ENST00000540317 REC8O95072 547 aa14.56□□□□□ -0.08
CYB561A3-215ENST00000540317 RPS8P62241 208 aaKnown RBP14.56□□□□□ -0.08
CYB561A3-215ENST00000540317 EAPPQ56P03 285 aaPredicted RBP14.56□□□□□ -0.08
CYB561A3-215ENST00000540317 VPS33BQ9H267 617 aa14.56□□□□□ -0.08
CYB561A3-215ENST00000540317 HACL1Q9UJ83 578 aa14.56□□□□□ -0.08
CYB561A3-215ENST00000540317 NSFL1CQ9UNZ2 370 aaKnown RBP14.56□□□□□ -0.08
CYB561A3-215ENST00000540317 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
CYB561A3-215ENST00000540317 POTEJP0CG39 1038 aa14.55□□□□□ -0.08
CYB561A3-215ENST00000540317 SLC4A3P48751 1232 aa14.55□□□□□ -0.08
CYB561A3-215ENST00000540317 HTRA3P83110 453 aa14.55□□□□□ -0.08
CYB561A3-215ENST00000540317 OS9Q13438 667 aaPredicted RBP14.55□□□□□ -0.08
CYB561A3-215ENST00000540317 CCDC152Q4G0S7 254 aa14.55□□□□□ -0.08
CYB561A3-215ENST00000540317 SNX21Q969T3 373 aa14.55□□□□□ -0.08
CYB561A3-215ENST00000540317 SUCLG2Q96I99 432 aa14.55□□□□□ -0.08
CYB561A3-215ENST00000540317 CCDC85AQ96PX6 553 aaPredicted RBP14.55□□□□□ -0.08
CYB561A3-215ENST00000540317 RTFDC1Q9BY42 306 aaPredicted RBP14.55□□□□□ -0.08
CYB561A3-215ENST00000540317 TAF1DQ9H5J8 278 aaPredicted RBP14.55□□□□□ -0.08
CYB561A3-215ENST00000540317 WDR90Q96KV7 1748 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms