RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ANKIB1Q9P2G1 1089 aa19.07■□□□□ 0.64
UBE3B-212ENST00000540230 ZNRF3Q9ULT6 936 aa19.07■□□□□ 0.64
UBE3B-212ENST00000540230 UTYO14607 1347 aa19.07■□□□□ 0.64
UBE3B-212ENST00000540230 UFL1O94874 794 aa19.06■□□□□ 0.64
UBE3B-212ENST00000540230 BRPF1P55201 1214 aaPredicted RBP19.06■□□□□ 0.64
UBE3B-212ENST00000540230 CXCL9Q07325 125 aa19.06■□□□□ 0.64
UBE3B-212ENST00000540230 LMBR1LQ6UX01 489 aa19.06■□□□□ 0.64
UBE3B-212ENST00000540230 DBNDD1Q9H9R9 158 aa19.06■□□□□ 0.64
UBE3B-212ENST00000540230 MINPP1Q9UNW1 487 aa19.06■□□□□ 0.64
UBE3B-212ENST00000540230 ZBED9Q6R2W3 1325 aa19.06■□□□□ 0.64
UBE3B-212ENST00000540230 TAF1DQ9H5J8 278 aaPredicted RBP19.05■□□□□ 0.64
UBE3B-212ENST00000540230 GGA1Q9UJY5 639 aa19.05■□□□□ 0.64
UBE3B-212ENST00000540230 CHMP3Q9Y3E7 222 aa19.05■□□□□ 0.64
UBE3B-212ENST00000540230 XDHP47989 1333 aa19.05■□□□□ 0.64
UBE3B-212ENST00000540230 A0A1B0GUL6 1792 aa19.05■□□□□ 0.64
UBE3B-212ENST00000540230 SCN9AQ15858 1988 aa19.05■□□□□ 0.64
UBE3B-212ENST00000540230 RAD17O75943 681 aa19.05■□□□□ 0.64
UBE3B-212ENST00000540230 HSPA6P17066 643 aa19.05■□□□□ 0.64
UBE3B-212ENST00000540230 SCNN1DP51172 638 aa19.05■□□□□ 0.64
UBE3B-212ENST00000540230 DOK7Q18PE1 504 aa19.05■□□□□ 0.64
UBE3B-212ENST00000540230 IQCA1LA6NCM1 817 aa19.04■□□□□ 0.64
UBE3B-212ENST00000540230 BCAR3O75815 825 aa19.04■□□□□ 0.64
UBE3B-212ENST00000540230 IGHMBP2P38935 993 aaKnown RBP19.04■□□□□ 0.64
UBE3B-212ENST00000540230 USP44Q9H0E7 712 aa19.04■□□□□ 0.64
UBE3B-212ENST00000540230 HACL1Q9UJ83 578 aa19.04■□□□□ 0.64
UBE3B-212ENST00000540230 ADAMTSL1Q8N6G6 1762 aa19.03■□□□□ 0.64
UBE3B-212ENST00000540230 ANKRD18BA2A2Z9 1011 aa19.03■□□□□ 0.64
UBE3B-212ENST00000540230 SMC1BQ8NDV3 1235 aa19.03■□□□□ 0.64
UBE3B-212ENST00000540230 ZNF594Q96JF6 807 aaPredicted RBP19.03■□□□□ 0.64
UBE3B-212ENST00000540230 EYA3Q99504 573 aa19.03■□□□□ 0.64
UBE3B-212ENST00000540230 KCNQ5Q9NR82 932 aa19.03■□□□□ 0.64
UBE3B-212ENST00000540230 TNNQ9UQP3 1299 aa19.03■□□□□ 0.64
UBE3B-212ENST00000540230 ECE2O60344 883 aa19.02■□□□□ 0.64
UBE3B-212ENST00000540230 EPHX2P34913 555 aa19.02■□□□□ 0.64
UBE3B-212ENST00000540230 FSTL1Q12841 308 aa19.02■□□□□ 0.64
UBE3B-212ENST00000540230 IFIT5Q13325 482 aaKnown RBP19.02■□□□□ 0.64
UBE3B-212ENST00000540230 CIAPIN1Q6FI81 312 aa19.02■□□□□ 0.64
UBE3B-212ENST00000540230 BICC1Q9H694 974 aaKnown RBP19.02■□□□□ 0.64
UBE3B-212ENST00000540230 ATP2B4P23634 1241 aa19.01■□□□□ 0.63
UBE3B-212ENST00000540230 EPS15P42566 896 aa19.01■□□□□ 0.63
UBE3B-212ENST00000540230 MPHOSPH8Q99549 860 aa19.01■□□□□ 0.63
UBE3B-212ENST00000540230 ZC3H12CQ9C0D7 883 aaKnown RBP19.01■□□□□ 0.63
UBE3B-212ENST00000540230 CCT4P50991 539 aaKnown RBP19■□□□□ 0.63
UBE3B-212ENST00000540230 EAPPQ56P03 285 aaPredicted RBP19■□□□□ 0.63
UBE3B-212ENST00000540230 ANKRD44Q8N8A2 993 aa19■□□□□ 0.63
UBE3B-212ENST00000540230 API5Q9BZZ5 524 aaKnown RBP19■□□□□ 0.63
UBE3B-212ENST00000540230 KIF16BQ96L93 1317 aa19■□□□□ 0.63
UBE3B-212ENST00000540230 SNAP23O00161 211 aa19■□□□□ 0.63
UBE3B-212ENST00000540230 GMPSP49915 693 aaPredicted RBP19■□□□□ 0.63
UBE3B-212ENST00000540230 CHRNDQ07001 517 aa19■□□□□ 0.63
UBE3B-212ENST00000540230 RABL6Q3YEC7 729 aaPredicted RBP19■□□□□ 0.63
UBE3B-212ENST00000540230 SHTN1A0MZ66 631 aa18.99■□□□□ 0.63
UBE3B-212ENST00000540230 PSMD14O00487 310 aa18.99■□□□□ 0.63
UBE3B-212ENST00000540230 KLRK1P26718 216 aa18.99■□□□□ 0.63
UBE3B-212ENST00000540230 CCDC57Q2TAC2 916 aa18.99■□□□□ 0.63
UBE3B-212ENST00000540230 TXNRD3Q86VQ6 643 aa18.99■□□□□ 0.63
UBE3B-212ENST00000540230 ZBTB12Q9Y330 459 aaPredicted RBP18.99■□□□□ 0.63
UBE3B-212ENST00000540230 PSME4Q14997 1843 aa18.98■□□□□ 0.63
UBE3B-212ENST00000540230 HTRA3P83110 453 aa18.98■□□□□ 0.63
UBE3B-212ENST00000540230 HELBQ8NG08 1087 aaPredicted RBP18.98■□□□□ 0.63
UBE3B-212ENST00000540230 GPRC5DQ9NZD1 345 aa18.98■□□□□ 0.63
UBE3B-212ENST00000540230 MED23Q9ULK4 1368 aa18.98■□□□□ 0.63
UBE3B-212ENST00000540230 ZNF646O15015 1829 aaPredicted RBP18.97■□□□□ 0.63
UBE3B-212ENST00000540230 TAF5LO75529 589 aa18.97■□□□□ 0.63
UBE3B-212ENST00000540230 TRIM27P14373 513 aa18.97■□□□□ 0.63
UBE3B-212ENST00000540230 LMOD1P29536 600 aaPredicted RBP18.97■□□□□ 0.63
UBE3B-212ENST00000540230 TNIP1Q15025 636 aa18.97■□□□□ 0.63
UBE3B-212ENST00000540230 CHADLQ6NUI6 762 aa18.97■□□□□ 0.63
UBE3B-212ENST00000540230 LDHDQ86WU2 507 aa18.97■□□□□ 0.63
UBE3B-212ENST00000540230 ARHGAP45Q92619 1136 aa18.97■□□□□ 0.63
UBE3B-212ENST00000540230 FRAT1Q92837 279 aaPredicted RBP18.97■□□□□ 0.63
UBE3B-212ENST00000540230 PUS3Q9BZE2 481 aaKnown RBP18.97■□□□□ 0.63
UBE3B-212ENST00000540230 ZNF804BA4D1E1 1349 aa18.96■□□□□ 0.63
UBE3B-212ENST00000540230 TAF7LQ5H9L4 462 aa18.96■□□□□ 0.63
UBE3B-212ENST00000540230 LDHAL6AQ6ZMR3 332 aa18.96■□□□□ 0.63
UBE3B-212ENST00000540230 LEMD3Q9Y2U8 911 aa18.96■□□□□ 0.63
UBE3B-212ENST00000540230 MEIS3Q99687 375 aa18.95■□□□□ 0.62
UBE3B-212ENST00000540230 ANKRD2Q9GZV1 360 aa18.95■□□□□ 0.62
UBE3B-212ENST00000540230 IRS2Q9Y4H2 1338 aa18.95■□□□□ 0.62
UBE3B-212ENST00000540230 G3V3G9 751 aa18.95■□□□□ 0.62
UBE3B-212ENST00000540230 DCAF8Q5TAQ9 597 aa18.95■□□□□ 0.62
UBE3B-212ENST00000540230 PNMA8AQ86V59 439 aaPredicted RBP18.95■□□□□ 0.62
UBE3B-212ENST00000540230 KLHDC4Q8TBB5 520 aa18.95■□□□□ 0.62
UBE3B-212ENST00000540230 CNNM1Q9NRU3 951 aa18.95■□□□□ 0.62
UBE3B-212ENST00000540230 INTS3Q68E01 1043 aaKnown RBP18.94■□□□□ 0.62
UBE3B-212ENST00000540230 ATF7IPQ6VMQ6 1270 aa18.94■□□□□ 0.62
UBE3B-212ENST00000540230 CLUAP1Q96AJ1 413 aa18.94■□□□□ 0.62
UBE3B-212ENST00000540230 CLEC11AQ9Y240 323 aa18.94■□□□□ 0.62
UBE3B-212ENST00000540230 UBTFL1P0CB47 393 aaPredicted RBP18.93■□□□□ 0.62
UBE3B-212ENST00000540230 APLP1P51693 650 aa18.93■□□□□ 0.62
UBE3B-212ENST00000540230 MAP1SQ66K74 1059 aaPredicted RBP18.93■□□□□ 0.62
UBE3B-212ENST00000540230 TRPM4Q8TD43 1214 aa18.93■□□□□ 0.62
UBE3B-212ENST00000540230 ADARB2Q9NS39 739 aaKnown RBP18.93■□□□□ 0.62
UBE3B-212ENST00000540230 CNOT7Q9UIV1 285 aaKnown RBP18.93■□□□□ 0.62
UBE3B-212ENST00000540230 PLIN1O60240 522 aa18.92■□□□□ 0.62
UBE3B-212ENST00000540230 VIL1P09327 827 aaKnown RBP18.92■□□□□ 0.62
UBE3B-212ENST00000540230 KCNJ4P48050 445 aa18.92■□□□□ 0.62
UBE3B-212ENST00000540230 LRRC24Q50LG9 513 aa18.92■□□□□ 0.62
UBE3B-212ENST00000540230 USP50Q70EL3 339 aaPredicted RBP18.92■□□□□ 0.62
UBE3B-212ENST00000540230 MICALL2Q8IY33 904 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms