RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 SCN4AP35499 1836 aa11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 POTECB2RU33 542 aa11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 BCAR3O75815 825 aa11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 DDNO94850 711 aaPredicted RBP11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 IGHMBP2P38935 993 aaKnown RBP11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 CCT4P50991 539 aaKnown RBP11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 LMBR1LQ6UX01 489 aa11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 TBC1D16Q8TBP0 767 aa11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 SUCLG2Q96I99 432 aa11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 L3MBTL3Q96JM7 780 aaPredicted RBP11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 USP44Q9H0E7 712 aa11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 XDHP47989 1333 aa11.33□□□□□ -0.6
LRTOMT-216ENST00000539271 ANKRD18BA2A2Z9 1011 aa11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 IPO8O15397 1037 aaKnown RBP11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 VEGFAP15692 232 aaPredicted RBP11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 HSPA6P17066 643 aa11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 EIF6P56537 245 aaKnown RBP11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 WASHC4Q2M389 1173 aa11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 ANKIB1Q9P2G1 1089 aa11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 GGA1Q9UJY5 639 aa11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 ZNRF3Q9ULT6 936 aa11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 MINPP1Q9UNW1 487 aa11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 CHMP3Q9Y3E7 222 aa11.32□□□□□ -0.6
LRTOMT-216ENST00000539271 TOMM70O94826 608 aa11.31□□□□□ -0.6
LRTOMT-216ENST00000539271 UFL1O94874 794 aa11.31□□□□□ -0.6
LRTOMT-216ENST00000539271 TRIM27P14373 513 aa11.31□□□□□ -0.6
LRTOMT-216ENST00000539271 RABL6Q3YEC7 729 aaPredicted RBP11.31□□□□□ -0.6
LRTOMT-216ENST00000539271 GPC2Q8N158 579 aa11.31□□□□□ -0.6
LRTOMT-216ENST00000539271 ANKRD44Q8N8A2 993 aa11.31□□□□□ -0.6
LRTOMT-216ENST00000539271 GPR101Q96P66 508 aaPredicted RBP11.31□□□□□ -0.6
LRTOMT-216ENST00000539271 EYA3Q99504 573 aa11.31□□□□□ -0.6
LRTOMT-216ENST00000539271 MPHOSPH8Q99549 860 aa11.31□□□□□ -0.6
LRTOMT-216ENST00000539271 BICC1Q9H694 974 aaKnown RBP11.31□□□□□ -0.6
LRTOMT-216ENST00000539271 A0A1B0GUL6 1792 aa11.31□□□□□ -0.6
LRTOMT-216ENST00000539271 ATP2B4P23634 1241 aa11.3□□□□□ -0.6
LRTOMT-216ENST00000539271 CCDC57Q2TAC2 916 aa11.3□□□□□ -0.6
LRTOMT-216ENST00000539271 INTS3Q68E01 1043 aaKnown RBP11.3□□□□□ -0.6
LRTOMT-216ENST00000539271 ATF7IPQ6VMQ6 1270 aa11.3□□□□□ -0.6
LRTOMT-216ENST00000539271 C16orf71Q8IYS4 520 aaPredicted RBP11.3□□□□□ -0.6
LRTOMT-216ENST00000539271 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
LRTOMT-216ENST00000539271 SCN9AQ15858 1988 aa11.3□□□□□ -0.6
LRTOMT-216ENST00000539271 IQCA1LA6NCM1 817 aa11.29□□□□□ -0.6
LRTOMT-216ENST00000539271 YDJCA8MPS7 323 aa11.29□□□□□ -0.6
LRTOMT-216ENST00000539271 RIMBP2O15034 1052 aa11.29□□□□□ -0.6
LRTOMT-216ENST00000539271 CXCL9Q07325 125 aa11.29□□□□□ -0.6
LRTOMT-216ENST00000539271 FRAT1Q92837 279 aaPredicted RBP11.29□□□□□ -0.6
LRTOMT-216ENST00000539271 ZNF594Q96JF6 807 aaPredicted RBP11.29□□□□□ -0.6
LRTOMT-216ENST00000539271 ZC3H12CQ9C0D7 883 aaKnown RBP11.29□□□□□ -0.6
LRTOMT-216ENST00000539271 ANKRD2Q9GZV1 360 aa11.29□□□□□ -0.6
LRTOMT-216ENST00000539271 TNNQ9UQP3 1299 aa11.29□□□□□ -0.6
LRTOMT-216ENST00000539271 GJA3Q9Y6H8 435 aa11.29□□□□□ -0.6
LRTOMT-216ENST00000539271 WTIPA6NIX2 430 aaPredicted RBP11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 ECE2O60344 883 aa11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 UBTFL1P0CB47 393 aaPredicted RBP11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 CHRNDQ07001 517 aa11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 TAF7LQ5H9L4 462 aa11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 ZKSCAN2Q63HK3 967 aa11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 CIAPIN1Q6FI81 312 aa11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 TAF1DQ9H5J8 278 aaPredicted RBP11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 DBNDD1Q9H9R9 158 aa11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 LEMD3Q9Y2U8 911 aa11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 PSME4Q14997 1843 aa11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 MED23Q9ULK4 1368 aa11.28□□□□□ -0.6
LRTOMT-216ENST00000539271 RAD17O75943 681 aa11.27□□□□□ -0.61
LRTOMT-216ENST00000539271 SCNN1DP51172 638 aa11.27□□□□□ -0.61
LRTOMT-216ENST00000539271 TNIP1Q15025 636 aa11.27□□□□□ -0.61
LRTOMT-216ENST00000539271 DOK7Q18PE1 504 aa11.27□□□□□ -0.61
LRTOMT-216ENST00000539271 LDHAL6AQ6ZMR3 332 aa11.27□□□□□ -0.61
LRTOMT-216ENST00000539271 MEIS3Q99687 375 aa11.27□□□□□ -0.61
LRTOMT-216ENST00000539271 ZNF804BA4D1E1 1349 aa11.27□□□□□ -0.61
LRTOMT-216ENST00000539271 EPHX2P34913 555 aa11.26□□□□□ -0.61
LRTOMT-216ENST00000539271 FSTL1Q12841 308 aa11.26□□□□□ -0.61
LRTOMT-216ENST00000539271 SMC1BQ8NDV3 1235 aa11.26□□□□□ -0.61
LRTOMT-216ENST00000539271 CLUAP1Q96AJ1 413 aa11.26□□□□□ -0.61
LRTOMT-216ENST00000539271 CNNM1Q9NRU3 951 aa11.26□□□□□ -0.61
LRTOMT-216ENST00000539271 HDAC5Q9UQL6 1122 aa11.26□□□□□ -0.61
LRTOMT-216ENST00000539271 ADAMTSL1Q8N6G6 1762 aa11.26□□□□□ -0.61
LRTOMT-216ENST00000539271 PSMD14O00487 310 aa11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 TAF5LO75529 589 aa11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 GNAI3P08754 354 aa11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 POTEIP0CG38 1075 aa11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 POTEJP0CG39 1038 aa11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 KLRK1P26718 216 aa11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 LMOD1P29536 600 aaPredicted RBP11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 RFX5P48382 616 aaPredicted RBP11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 GMPSP49915 693 aaPredicted RBP11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 TXNRD3Q86VQ6 643 aa11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 TMEM57Q8N5G2 664 aa11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 PUS3Q9BZE2 481 aaKnown RBP11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 KCNQ5Q9NR82 932 aa11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 GPRC5DQ9NZD1 345 aa11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 RIPOR2Q9Y4F9 1068 aa11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 LRRFIP2Q9Y608 721 aaKnown RBP11.25□□□□□ -0.61
LRTOMT-216ENST00000539271 IRS2Q9Y4H2 1338 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms