RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 PLBD2Q8NHP8 589 aa18.45■□□□□ 0.54
PBX3-212ENST00000538998 TBC1D16Q8TBP0 767 aa18.45■□□□□ 0.54
PBX3-212ENST00000538998 CDCA5Q96FF9 252 aa18.45■□□□□ 0.54
PBX3-212ENST00000538998 FAM89AQ96GI7 184 aa18.45■□□□□ 0.54
PBX3-212ENST00000538998 PDE4DIPQ5VU43 2346 aa18.44■□□□□ 0.54
PBX3-212ENST00000538998 FKBP1BP68106 108 aa18.44■□□□□ 0.54
PBX3-212ENST00000538998 RASAL3Q86YV0 1011 aa18.44■□□□□ 0.54
PBX3-212ENST00000538998 ISCA1Q9BUE6 129 aa18.44■□□□□ 0.54
PBX3-212ENST00000538998 ZC3H12CQ9C0D7 883 aaKnown RBP18.44■□□□□ 0.54
PBX3-212ENST00000538998 CHPF2Q9P2E5 772 aa18.44■□□□□ 0.54
PBX3-212ENST00000538998 ZNF609O15014 1411 aa18.43■□□□□ 0.54
PBX3-212ENST00000538998 G3V3G9 751 aa18.43■□□□□ 0.54
PBX3-212ENST00000538998 RPS8P62241 208 aaKnown RBP18.43■□□□□ 0.54
PBX3-212ENST00000538998 DCAF8Q5TAQ9 597 aa18.43■□□□□ 0.54
PBX3-212ENST00000538998 ANKRD13DQ6ZTN6 518 aa18.43■□□□□ 0.54
PBX3-212ENST00000538998 ZNF428Q96B54 188 aa18.43■□□□□ 0.54
PBX3-212ENST00000538998 PODXL2Q9NZ53 605 aa18.43■□□□□ 0.54
PBX3-212ENST00000538998 TMPOP42166 694 aaKnown RBP18.42■□□□□ 0.54
PBX3-212ENST00000538998 ZNF280AP59817 542 aaPredicted RBP18.42■□□□□ 0.54
PBX3-212ENST00000538998 PKN2Q16513 984 aaKnown RBP18.42■□□□□ 0.54
PBX3-212ENST00000538998 AGBL3Q8NEM8 1001 aa18.42■□□□□ 0.54
PBX3-212ENST00000538998 AKAP11Q9UKA4 1901 aa18.42■□□□□ 0.54
PBX3-212ENST00000538998 IRS4O14654 1257 aaPredicted RBP18.41■□□□□ 0.54
PBX3-212ENST00000538998 HDGFL1Q5TGJ6 251 aa18.41■□□□□ 0.54
PBX3-212ENST00000538998 ANGEL2Q5VTE6 544 aaKnown RBP18.41■□□□□ 0.54
PBX3-212ENST00000538998 HPS5Q9UPZ3 1129 aa18.41■□□□□ 0.54
PBX3-212ENST00000538998 ASTN2O75129 1339 aaPredicted RBP18.41■□□□□ 0.54
PBX3-212ENST00000538998 PAPPA2Q9BXP8 1791 aa18.4■□□□□ 0.54
PBX3-212ENST00000538998 ATP5J2-PTCD1G3V325 749 aa18.4■□□□□ 0.54
PBX3-212ENST00000538998 CHL1O00533 1208 aa18.4■□□□□ 0.54
PBX3-212ENST00000538998 UFL1O94874 794 aa18.4■□□□□ 0.54
PBX3-212ENST00000538998 HOXB7P09629 217 aa18.4■□□□□ 0.54
PBX3-212ENST00000538998 SCARF1Q14162 830 aa18.4■□□□□ 0.54
PBX3-212ENST00000538998 KRT24Q2M2I5 525 aa18.4■□□□□ 0.54
PBX3-212ENST00000538998 ANKIB1Q9P2G1 1089 aa18.4■□□□□ 0.54
PBX3-212ENST00000538998 DBF4Q9UBU7 674 aaPredicted RBP18.4■□□□□ 0.54
PBX3-212ENST00000538998 PITPNM2Q9BZ72 1349 aa18.4■□□□□ 0.54
PBX3-212ENST00000538998 COL4A1P02462 1669 aa18.4■□□□□ 0.54
PBX3-212ENST00000538998 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.53
PBX3-212ENST00000538998 TRIM28Q13263 835 aaKnown RBP18.39■□□□□ 0.53
PBX3-212ENST00000538998 RTL5Q5HYW3 569 aaPredicted RBP18.39■□□□□ 0.53
PBX3-212ENST00000538998 RSBN1LQ6PCB5 846 aaPredicted RBP18.39■□□□□ 0.53
PBX3-212ENST00000538998 GGA1Q9UJY5 639 aa18.39■□□□□ 0.53
PBX3-212ENST00000538998 HDAC9Q9UKV0 1011 aa18.39■□□□□ 0.53
PBX3-212ENST00000538998 POLR2AP24928 1970 aaKnown RBP18.39■□□□□ 0.53
PBX3-212ENST00000538998 HYPKQ9NX55 129 aa18.38■□□□□ 0.53
PBX3-212ENST00000538998 USP17L8P0C7I0 530 aa18.37■□□□□ 0.53
PBX3-212ENST00000538998 MYOZ2Q9NPC6 264 aa18.37■□□□□ 0.53
PBX3-212ENST00000538998 SCN9AQ15858 1988 aa18.37■□□□□ 0.53
PBX3-212ENST00000538998 ZBTB38Q8NAP3 1195 aaPredicted RBP18.36■□□□□ 0.53
PBX3-212ENST00000538998 ZNF296Q8WUU4 475 aaPredicted RBP18.36■□□□□ 0.53
PBX3-212ENST00000538998 SEC31BQ9NQW1 1179 aa18.36■□□□□ 0.53
PBX3-212ENST00000538998 LAS1LQ9Y4W2 734 aaKnown RBP18.36■□□□□ 0.53
PBX3-212ENST00000538998 CCDC152Q4G0S7 254 aa18.35■□□□□ 0.53
PBX3-212ENST00000538998 NOM1Q5C9Z4 860 aaKnown RBP18.35■□□□□ 0.53
PBX3-212ENST00000538998 GMLQ99445 158 aa18.35■□□□□ 0.53
PBX3-212ENST00000538998 TBC1D8O95759 1140 aa18.34■□□□□ 0.53
PBX3-212ENST00000538998 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
PBX3-212ENST00000538998 PODNQ7Z5L7 613 aa18.34■□□□□ 0.53
PBX3-212ENST00000538998 XDHP47989 1333 aa18.33■□□□□ 0.53
PBX3-212ENST00000538998 USP17L3A6NCW0 530 aa18.33■□□□□ 0.52
PBX3-212ENST00000538998 USP17L4A6NCW7 530 aa18.33■□□□□ 0.52
PBX3-212ENST00000538998 USP17L1Q7RTZ2 530 aa18.33■□□□□ 0.52
PBX3-212ENST00000538998 UBE2Q2LH0YL09 131 aa18.32■□□□□ 0.52
PBX3-212ENST00000538998 GPR25O00155 361 aa18.32■□□□□ 0.52
PBX3-212ENST00000538998 NF2P35240 595 aa18.32■□□□□ 0.52
PBX3-212ENST00000538998 TM4SF4P48230 202 aa18.32■□□□□ 0.52
PBX3-212ENST00000538998 GOLGA2Q08379 1002 aa18.32■□□□□ 0.52
PBX3-212ENST00000538998 FBXO46Q6PJ61 603 aaPredicted RBP18.32■□□□□ 0.52
PBX3-212ENST00000538998 MOB2Q70IA6 237 aa18.32■□□□□ 0.52
PBX3-212ENST00000538998 RIC3Q7Z5B4 369 aa18.32■□□□□ 0.52
PBX3-212ENST00000538998 PSME4Q14997 1843 aa18.31■□□□□ 0.52
PBX3-212ENST00000538998 PDE8AO60658 829 aa18.31■□□□□ 0.52
PBX3-212ENST00000538998 ATP2B4P23634 1241 aa18.31■□□□□ 0.52
PBX3-212ENST00000538998 SREBF2Q12772 1141 aa18.31■□□□□ 0.52
PBX3-212ENST00000538998 TTLL12Q14166 644 aaPredicted RBP18.31■□□□□ 0.52
PBX3-212ENST00000538998 TRIM35Q9UPQ4 493 aa18.31■□□□□ 0.52
PBX3-212ENST00000538998 PCCAP05165 728 aaPredicted RBP18.3■□□□□ 0.52
PBX3-212ENST00000538998 RALBP1Q15311 655 aa18.3■□□□□ 0.52
PBX3-212ENST00000538998 DUSP27Q5VZP5 1158 aa18.3■□□□□ 0.52
PBX3-212ENST00000538998 ANKRD18AQ8IVF6 992 aa18.3■□□□□ 0.52
PBX3-212ENST00000538998 OGFOD1Q8N543 542 aa18.3■□□□□ 0.52
PBX3-212ENST00000538998 CCDC191Q8NCU4 936 aa18.3■□□□□ 0.52
PBX3-212ENST00000538998 GCC1Q96CN9 775 aa18.3■□□□□ 0.52
PBX3-212ENST00000538998 CFHR5Q9BXR6 569 aa18.3■□□□□ 0.52
PBX3-212ENST00000538998 NBPF9Q3BBW0 867 aa18.29■□□□□ 0.52
PBX3-212ENST00000538998 PRAMEF18Q5VWM3 479 aa18.29■□□□□ 0.52
PBX3-212ENST00000538998 CCDC146Q8IYE0 955 aa18.29■□□□□ 0.52
PBX3-212ENST00000538998 SCAF8Q9UPN6 1271 aaKnown RBP18.29■□□□□ 0.52
PBX3-212ENST00000538998 MYO3BQ8WXR4 1341 aa18.28■□□□□ 0.52
PBX3-212ENST00000538998 FKTNO75072 461 aa18.28■□□□□ 0.52
PBX3-212ENST00000538998 RUNDC1Q96C34 613 aa18.28■□□□□ 0.52
PBX3-212ENST00000538998 MYD88Q99836 296 aa18.28■□□□□ 0.52
PBX3-212ENST00000538998 MED23Q9ULK4 1368 aa18.28■□□□□ 0.52
PBX3-212ENST00000538998 WNT10BO00744 389 aa18.27■□□□□ 0.52
PBX3-212ENST00000538998 MMP14P50281 582 aa18.27■□□□□ 0.52
PBX3-212ENST00000538998 CCDC85AQ96PX6 553 aaPredicted RBP18.27■□□□□ 0.52
PBX3-212ENST00000538998 CDC5LQ99459 802 aaKnown RBP18.27■□□□□ 0.52
PBX3-212ENST00000538998 CWC25Q9NXE8 425 aaPredicted RBP18.27■□□□□ 0.52
PBX3-212ENST00000538998 MKRN3Q13064 507 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms